Xanthomonas dyei: NYR95_22495
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Entry
NYR95_22495 CDS
T09460
Name
(GenBank) STM4012 family radical SAM protein
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
xdy
Xanthomonas dyei
Pathway
xdy00860
Porphyrin metabolism
xdy01100
Metabolic pathways
xdy01110
Biosynthesis of secondary metabolites
xdy01240
Biosynthesis of cofactors
Module
xdy_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
xdy00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
NYR95_22495
Enzymes [BR:
xdy01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
NYR95_22495
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
HemN_C
Motif
Other DBs
NCBI-ProteinID:
WOB53984
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All DBs
Position
complement(5154490..5155851)
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AA seq
453 aa
AA seq
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MSLPSLAQLLRQPPYQAYSYSYPHKTSYRPLQPAVPLSQVWADEPRQALFLYLHIPFCSY
RCGFCNLFALARPAPAQVEAYLAQMEQQLRATVQALGTHRFVRFAMGGGTPSYLDPAQLQ
RVFDMVDRHATIALDTIPAGIEVSPETVDAERLRVCRQAGIDRVSMGIQSFSAAEVSALV
RPPQRDTVERAIAIIRAQDIPTLNLDLIYGIAGQTVDSFLASIDSALQHAPEELYLYPLY
VRPMTGLGRIEAKAGGRRSFVLQPEPLDERLVLYRAGRDHLLAAGYTQVSMRMFRAPHAR
DSDAPVYCCQSDGMVGIGCGARSYTAGLHYSSEYGVSRRSVAEILEHYLARDPASFACAD
YGIALDADDAMRRHAIQSLLVFPGLDCDEFRQRFGRDCLESLPQLQELLALGLAQRHGAL
LALTAAGMERADTIGPWLTSAPIVERMQQYQVG
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgccttcgttggcccaattgctgcgccagccgccgtatcaggcctattcgtac
tcgtatccgcacaagaccagttaccggccgctgcagccggccgtgccgttgtcgcaggtc
tgggccgacgagccccggcaggcgctgtttctgtacctgcacatcccgttctgctcgtac
cgctgcgggttctgcaatctgttcgcactggcgcggcctgcgccggcgcaggtggaggcg
tatctggcgcagatggagcagcaactgcgcgccaccgtgcaggcattgggcacgcaccgc
ttcgtgcgctttgcgatgggcggcggcacgccgagctatctggatccggcgcaattgcag
cgcgtgttcgacatggtggaccgccacgcgacgattgcgctggacaccattccggccggc
atcgaggtgtcgccggaaaccgtcgatgccgagcggctgcgggtctgccggcaggccggc
atcgatcgggtcagcatgggcatccagagtttcagcgctgccgaagtgagcgcactggtg
cggccgccgcaacgcgacacggtggagcgggcgatcgccatcattcgcgcccaggacatt
ccaacgctgaatctggatctgatctacggcatcgccgggcagaccgtggatagtttcctg
gcctccatcgacagcgcactgcagcatgcgcccgaagaactgtatctgtacccgctgtac
gtgcgtccgatgaccggcctgggccggatcgaggccaaggcgggcgggcgacgcagcttt
gtgctgcaacccgagccgctggacgagcgcctggtgctgtaccgcgccggccgcgaccat
ctgctggcggccggctacacgcaggtgtcgatgcgcatgttccgcgccccgcatgcgcgc
gatagcgacgcgccggtgtactgctgtcagagcgatggcatggtgggcatcggctgcggc
gcgcgctcgtataccgccggcctgcattactccagcgaatacggggtgagccggcgctcg
gtggcggagattctcgagcactatctggcgcgcgatccggccagcttcgcctgcgccgac
tacggcatcgcgctggatgccgacgatgccatgcggcggcatgcgatccagtcgctgctg
gtgtttccggggctggactgcgatgagttccgtcagcgctttggccgcgattgcctggag
tctttgccacagctgcaggagttgctggcgttagggctggcgcaacggcacggagcgctg
ctggcgctcaccgccgcaggcatggagcgggccgacaccatcggcccgtggctgacctcg
gcaccgattgtcgagcgcatgcagcagtaccaggtcgggtaa
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