Xanthomonas dyei: NYR95_22845
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Entry
NYR95_22845 CDS
T09460
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
xdy
Xanthomonas dyei
Pathway
xdy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xdy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NYR95_22845 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xdy03400
]
NYR95_22845 (recB)
Enzymes [BR:
xdy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NYR95_22845 (recB)
DNA repair and recombination proteins [BR:
xdy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NYR95_22845 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WOB54041
LinkDB
All DBs
Position
complement(5231704..5235567)
Genome browser
AA seq
1287 aa
AA seq
DB search
MSAPVSDPYLQLPLHGVRLIEASAGTGKTFTLATLFTRLVVERGLRIGQILAVTFTEAAT
QELRRRIRERLVLAASLVPDTVVGADLAATKPPATQASNAPSASIGAASAAIDLADVPSR
PRPLLQEAPDVLLTRAILTAHLATGDETPAALRRRLQQAVEEIDLAAVFTIHGFCARVLR
EHALESGQAFAAPQLLANDRELLSEVAADLWRQRAADAVMAEDLIALWSGGPPALATDLR
ALVRHAAILPTASDASSDDAAALLQAVDDARHALASAFHAHGTAFFESIMSAIDGGILSK
VSYKPDWLTALWHWFDSFAAAPTHDSAPHPKLLKLTAAELASGTNKKFVDRTPASPMSHE
IDGYLTALARVEEWRTRRRIRLLHALRDDAIARLALLKRQRRVQTYDDLVDGVAHALQGP
QAGALVQRLRAQYAIALVDEFQDTDDRQWSIFSSVFGEGPLARAAGLEPALFLIGDPKQA
IYGFRGGDVRTYLAAAITAELAPPLSHNFRSRPGVLAAIDALYAQAGYTEAFLTDGIAFH
PVQAGTKRADADLQRDGATAPALTLWRAPEPPPPAKGKPKPWSAGRARELATAACVAAIR
GWLAGGRDGTATINGNPVQAGDIAVLVRSHGEATRIQQALGAMGIPAVAAGKQSLFATDE
ALELLALLQALLDPGDDSRLRAALATVLIGEDAIAIAALERDGQRHRRWQQHALDWRERW
QRGGPLALIGELGATHGQRLLALVDGERRLTNYLQLAELLQEADVRALGPHGLVDWLARR
IANADDNDEAQQLRLESDARRVQIVTLHKSKGLEYPLVFLPYIGIGRSDKGAGRHCVVHA
PDSGRQLHWKTDKDDPSWSAAEAAWKQEQRAEDARLLYVGLTRAEHALWIASGSFHQHER
TALSGMLRALDALQGAAGEGAVVVDTSTPPANLPRLPPPIEAQVPPARSPQRHIAPEWWV
YSFTQLANADAGAAIDPMASATVVGSGGSDEPSGSEAVAVAAATEAEPFDARFAGNRFGV
VMHDVFERCDFAAWHAWQPGQPAPEGQATAILDALQRGGYAQDDLDDGLRVLTALIGHTL
TVVLPEGTALAAVPEPQRRNEMEFHFAMRPTRVDALLALLHRFGVVGDRQAFGARHRLEG
LMTGLIDLTYTVDGRWYVLDYKSNRLPSYDADALARAMAHSEYELQALIYTVALHRWLRF
RLGDAADGGGYDYTRDFGGVRYLFCRGLDATRNAADPGSASAAVPRSPAPGIHAWRFDPA
LVDALDALFAGSALEPTSSNAGTPNAH
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcctgtgagcgacccgtatctgcagttgccgctgcacggcgtgcgcctgatc
gaggccagcgccggtaccggcaagaccttcaccctggccacgttgttcacccggctggtg
gtcgagcgcggcttgcgcatcggccagatcctggcggtgacctttaccgaagcggccacg
caggaattgcgccgccgcatccgcgagcgcctggtgctggccgcctccctcgtccccgac
accgtcgtaggagcggacctggccgcgaccaaaccacctgcaacgcaggcatccaacgct
ccatcagcgtctataggagcggcgtcggccgcgatcgacctcgccgacgtcccgtcgcgg
ccaaggccgctcctacaggaagcgcccgacgtcctgctcacccgcgccatcctcaccgcg
catctggctaccggcgatgaaaccccggccgcgttgcgtcgccgcctgcagcaggcggta
gaagaaatcgacctggccgccgtgttcaccatccacggcttctgcgcgcgcgtgctgcgc
gaacatgcgctggaaagcggccaggccttcgccgcgccgcaactgctcgccaacgaccgc
gaactgctgagcgaagtggccgccgatctgtggcgccaacgtgcggccgatgcggtgatg
gccgaagacttgatcgcgctgtggtctggcggcccgcctgcgctggccaccgatctgcgc
gcgttggtgcggcacgcggcgatcctgccgacagcgtccgatgccagcagcgacgatgct
gccgcattgctgcaggcggtggacgatgcacgccacgcgctggcaagcgcattccacgcg
catggcacggcgtttttcgaatccatcatgtccgccatcgatggcggcatcttgagcaag
gtcagttacaaaccggactggctcactgcgctctggcactggttcgacagcttcgccgcc
gcgccaacgcacgacagcgccccgcatcccaagctgctcaagttgaccgctgccgaactg
gcatcgggcaccaacaagaagttcgtcgatcgcacgccggcctcgccgatgagccacgaa
atcgacggctatctcaccgcgctggcacgtgtcgaagaatggcgcacacgccgccgcatc
cgtctgctgcatgccctgcgcgacgatgccatcgcacggctcgcgctgctcaagcgccag
cgccgtgtgcagacctacgacgacctggtcgatggcgtggcgcacgcgctgcaaggcccg
caagccggtgcactggtgcaacgcctgcgcgcgcaatacgccatcgcgctggtggacgaa
ttccaggacaccgacgaccgtcagtggtcgatcttttccagcgtgttcggcgaaggcccg
ctcgcacgtgcggccgggctcgagccggcgctgtttttgatcggcgaccccaagcaggcc
atctacggctttcgtggtggcgatgtgcgcacctatttggccgccgcaatcaccgccgaa
ctggcgccaccgctgagccacaatttccgctcgcgccctggcgtgctggcggcgatcgat
gcgttgtacgcgcaggccggctacaccgaggccttcctcaccgacggtatcgcctttcac
ccggtgcaggcaggcaccaagcgcgccgatgccgacctgcagcgcgatggcgccaccgcc
ccggcgctgacgctgtggcgcgcgccggaaccgccgccgcctgcgaaaggcaagcccaaa
ccctggagcgccggccgcgcgcgcgagctggccaccgccgcctgcgtggctgccatccgc
ggctggctggccggtggtcgcgacggcaccgccaccatcaatggcaacccggtgcaggcc
ggcgatatcgccgtgctggtgcgtagccacggcgaggccacgcgcatccagcaagcgctg
ggcgcgatgggcattccggcggtcgccgccggcaagcagagcctgttcgccaccgacgaa
gcattggaactgctggccctgctacaggccttgctcgaccccggcgacgacagccgcctg
cgcgccgcgctggccacggtgttgatcggcgaagacgccatcgccattgccgcactcgaa
cgcgatgggcaacgccatcgccgctggcagcagcacgcactggactggcgcgagcgctgg
cagcgcggcggcccgctggccttgatcggcgagctgggcgccacgcacgggcaacgcctg
ctcgcgctggtcgatggcgagcgccgcctcaccaattacctgcaactggccgaactgctg
caggaagccgacgtgcgcgcactcggcccgcacggtctggtggactggctggcacgccgc
atcgccaatgccgacgacaacgacgaagcccagcaactgcggctggaatcggacgcgcgc
cgcgtgcagatcgtcaccctgcacaagagcaagggcctggagtatccgctggtgtttctg
ccgtacatcggcatcggccgcagcgacaagggcgctggccgccattgcgtggtgcatgcg
ccggacagcggccgtcagctgcattggaagacagacaaggacgaccccagctggagtgcc
gccgaagccgcctggaagcaggaacaacgtgccgaagacgcacgcctgctctacgtcggc
ctgacccgcgccgagcatgctctatggatcgccagcggcagcttccatcagcacgaacgc
actgctttgtcgggcatgctgcgcgcgctcgatgcgttgcaaggcgcggcaggcgagggc
gcggtggtggtggacaccagcaccccgccagccaacctgccgcgcctgccgccgccgatt
gaggcgcaggtgccgccggcgcgcagtccgcaacggcacatcgcgccggaatggtgggtc
tacagcttcacccagctggccaacgccgatgccggcgccgccatcgacccgatggccagc
gccaccgtggtgggcagtggcggcagcgacgagccgtccggcagcgaggcggtggcggtt
gccgcagccaccgaggccgaaccgttcgatgcgcgttttgccggcaaccgcttcggcgtg
gtgatgcacgacgtgttcgaacgctgcgactttgccgcctggcacgcgtggcagcccggc
caacccgcgcccgagggtcaggccaccgcaatcctcgacgccctgcaacgcggcggctat
gcccaggacgatctcgacgacggcctgcgcgtgctcaccgccctgatcggccacaccctc
accgtggtgttgcccgaaggcaccgccctggccgccgtgcccgagccgcagcgccgcaac
gaaatggaattccacttcgccatgcggcccacccgcgtcgatgcgctgctggcgttgctg
catcggtttggtgtggtcggcgaccgccaggccttcggcgcgcgccaccgcctggaaggc
ctgatgaccggcctgatcgatctcacctacaccgtcgatggccgctggtacgtgctcgac
tacaaatccaaccgcctgcccagctatgacgccgacgccctggcccgcgccatggcgcac
agcgagtacgagctgcaggcgctgatctacaccgtggccctgcaccgctggctgcgcttc
cgcctgggcgatgccgccgacggtggcggctacgactacacccgcgacttcggcggcgtg
cgctacctgttctgtcgcggcctggacgccacccgcaacgcggccgaccccggctccgcc
agcgctgccgttccccgctcgcccgcccccggcatccacgcctggcgcttcgacccggcc
ctggtcgacgccctggacgcgctgttcgccggcagcgccctggagccgacctccagcaac
gcaggcacgcccaatgcccactag
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