Xenia sp. Carnegie-2017 (soft corals): 124433402
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Entry
124433402 CDS
T08024
Name
(RefSeq) sodium channel protein 1 brain-like
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xen04040
]
124433402
Ion channels [BR:
xen04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
124433402
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
IQ_SCN5A_C
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
124433402
NCBI-ProteinID:
XP_046839115
LinkDB
All DBs
Position
Unknown
AA seq
1558 aa
AA seq
DB search
MIYLATSQYFEVFILVLIVINCILLTFKNPPEEVEYLFAGLYTMEMIVKIIAKGFCLHKF
AYLRDPWNWLDFIVVNLGYLTMAPSVANLSGIRTFRVLRALRTISVVEGLRTMVNAFLRS
MRMLTDVLILSLFFISIFALIGTQLFAGALKNKCVSIPNNSTFNFDDSVKNRSNWLFVNG
DPVICGNVSTARSCPVNYTCLPDIGNNPNYGYTNFDAFTWSLLSTVQLVTADYWENIYNH
IIASTGFWSVFYFLMVIFFGSFYLLNLILAVVALSYQQEITNKESGQSLREISSSYSFHM
TFKPQPLYPNMASKVLINWFSFHFNKRTSPESPLEAISPGPHCSSSCDCTTQLEHGRTTR
DTTTLSSLPETSSMSTLNSETQEISQSSYHENIKETCPVQSSYAVKTYSNIQAPFNFQKY
RHFSRKSVPAALAEVPHTVGLIMRSSYCLYISPNTSLIRRKCLMMVTSPIFDWFVLGVIL
LNTIVMAVEYHGMDETFLNVLNMINMVCTFVFIMEFVTKVAALSFRCYIKSRWNILDGFV
VIVSLVELAIVWFVPKISYGLGFGVFRTLRLLRVLKLAQSWVTMRALLSIISASLGQLGN
LTLLLMIVIYTFAVIGMQIFSGCYTPQHFEQRVVPRWNFTDFLHSFMMIFRVLCGEWIEP
LIITMHLTSPAAIIFYFAVLIIGNFLILNLFLALLLSSFSTESLKSDEYKRPENTTFPLR
RLVKKYLNLSRLFPSTYESGKTRRQSTFDKIGVKQDDNLHEIPKTIDVHPSDQSNRERES
CDTPHTPSSRSRANCDVDLAVPDCLPQLCHSCPCYKINPDSVVNKAIMLGRAKVLAVVEN
KHFDTFILFIIFISSVSLAFEDVHLDSRPRLKNILKILNYVTTIIFVLEFCLKIFGFGVL
QYFRDVWNCLDFFIAAISICSLIGSNLSSFRALRTLRALRPLRAISRWHGMKIVVNSLFA
VIPEIFNVCLVCTVFWLIFSVMGVQFFGGRFYKCVDENGEKLAASIVTDKTKCLSMNYKW
RNSKIHFDNSFAGFIALFQVATFEGWMEIMADAADVTEVDKQPIRNKNHLAPLYFVVFIV
FGSFFVLNLFVGVTVENFNRLKKHYESGAVNLFLTDTQRAWYETLKKAANKKPRKVERRP
VEYWRGRMFDVIKSSKFEWMIFVFILLNLIVLTLKHHGQSETITSLLKYSNLAFTVVFFL
EAALRIFAQRMEYFKDAWNVFDFAILTFSVAALIMEALSQSFIITPTIFRVARVFRVGRL
LRFYTNMRGVRRLLITLLISLPALVNIGALLFLIIFIYAIIGMSMFAHVKHTGAVDDMVN
FETFVNSILLLFRLSTSAGWNDVLEPLMIQPPDCDLSHKDLPNGNCGLPSFAVSYFVSFV
LITSLIIVNMYIAIIMENLHEACRAENTGLTEEDLDMFYKNWQIYDPRATQYIPHSHLSD
FVDSLDEPMRISKPNKYACINLHIPIHQGDRIHCVDVIQALVRRLLGDIEHDDAEMFSYI
QTKVEEAFLAAFPDRATQLTRTTTFERNQENCAAQIIQKAWRGRMKRNEDSRKKSCPS
NT seq
4677 nt
NT seq
+upstream
nt +downstream
nt
atgatatacctcgcgacaagtcaatattttgaagtgttcatattggttctaattgtcatt
aattgcattctactcacatttaaaaatcctccagaagaagtcgaatatctttttgctggc
ctttacacgatggagatgattgtaaagatcatcgccaaaggattttgccttcacaagttc
gcctatcttcgagatccatggaactggttggattttattgtcgttaacctggggtatctt
actatggctccgagtgtcgcaaatctttctgggatacggacatttcgtgtgttacgagct
ttaagaacaatctccgttgtcgaaggtttaagaacaatggttaacgctttcttgagatcc
atgcgaatgcttacagatgtgttgatattgtccttatttttcatctcgatctttgcgctc
attggaacgcagctcttcgctggtgctctcaagaacaaatgtgtttccattccgaataac
agcactttcaacttcgatgacagcgtaaagaatagaagcaattggctttttgtaaatgga
gatccggttatctgcggtaatgtctccacagcaaggtcatgtcctgtgaactacacgtgc
cttcctgacatcggcaataatcccaactatggctacacaaatttcgatgcgttcacgtgg
tctttgctctccactgtacagttggtcacagcagactactgggaaaatatctataatcat
atcattgcatctactggtttttggtcggtattttattttcttatggtgatattttttggt
tcattctaccttctcaatctcattctggcagttgtagcgctatcctatcaacaggaaatc
acaaacaaggaatctggacaaagtttacgagaaatttcttcgtcgtattcctttcacatg
actttcaaacctcaaccgctttatccaaacatggcatcaaaagtcctgatcaattggttc
tcgtttcattttaacaaacgaacttcacccgaatctcctctggaggccatatctccggga
cctcattgttcaagctcatgtgattgcactactcaactggaacacggtcgcacaacacgt
gacactacgacgttgtcttccttgcctgagacctcaagcatgtcgaccttgaacagtgaa
actcaggaaatttctcaatcaagttatcatgaaaacatcaaagaaacttgccccgtacaa
agtagttatgcagtgaaaacctattcaaacattcaagctccttttaattttcaaaagtac
aggcatttctctcgaaaatctgtcccagcagcccttgcggaagttcctcataccgttggc
ctgataatgcgctcctcttattgcttgtatatttcgcccaacacatcattgatacgacgc
aaatgtttgatgatggtcactagtcccatttttgattggttcgttcttggcgtgatactt
ttgaatacgattgtgatggccgtagagtatcacggtatggatgaaaccttcctgaatgtt
ttgaacatgatcaatatggtttgtacatttgtatttatcatggaatttgtaacgaaagtg
gcggctctctcctttcgatgttatattaaaagtcggtggaatattctggacggttttgtg
gtcatcgttagtcttgtcgaactggcgatagtttggtttgtacccaaaataagctacggc
ctcgggtttggagttttcagaactttaaggctgctccgcgtgctaaagttggctcaatcg
tgggtgacgatgcgagcgcttctctcgataatcagtgcgagtcttggtcaactcggcaat
ctcacgctactactcatgattgtcatctacacttttgccgttattggtatgcagatattt
tcgggatgctatacgccacaacatttcgagcagagggtcgtaccaagatggaacttcacc
gattttcttcactccttcatgatgatattccgtgttctttgtggggaatggatagaacct
ttgataataacgatgcatctgacctcacccgccgcaatcattttctattttgctgtcctc
atcatcggaaacttcctgatattgaatctgtttttggcacttttactgagttccttttcc
acggaatcacttaaaagcgacgaatacaaacgacccgaaaacacaactttcccattgcga
cgactcgtaaagaaatacttgaatttgtcacgtctgtttccctccacatatgaaagtgga
aaaacacgaagacaatcgactttcgataagatcggcgtcaaacaagacgacaatctccac
gaaataccaaaaacgattgacgtgcacccgtctgaccaatcaaacagagagagggagtca
tgtgatacaccacacacgccatcaagtcgctcaagagccaattgcgatgttgatttggct
gtgccagactgtctcccacaactctgccacagttgcccgtgttataaaataaatcccgat
tcagtagttaataaagccatcatgttaggccgtgcgaaagtattggctgtcgtagaaaat
aaacactttgatacatttatcctctttattatattcatcagcagtgtgtcattggctttt
gaagatgtgcatttggactctagaccacgactgaaaaatattctaaagatcctcaactac
gtcacgacaatcatttttgtgttagagttctgtctaaaaatctttggtttcggtgtactc
cagtactttcgtgacgtgtggaattgcttagattttttcatagctgcgatatcgatatgt
agtttgattggtagtaacctgtcatcgtttcgcgcgttacgaaccttgcgggcattacga
ccattgcgggctatatcccgttggcatggaatgaagatcgtagtgaactctctattcgcc
gtcattccagagattttcaacgtatgtctcgtttgtactgtattctggctcatctttagc
gttatgggtgttcaatttttcggtggaagattttacaagtgcgttgatgaaaatggcgag
aaattggccgcctcgatcgtgacggataagaccaaatgcctttcaatgaactacaaatgg
aggaattcaaaaatccactttgataattcttttgctggcttcattgctctttttcaagtg
gcaacatttgaaggatggatggaaatcatggccgatgcagctgacgtcactgaggttgat
aagcagccaatacgtaacaagaaccatttagctccattgtactttgtcgttttcattgta
tttggatcattttttgtgctaaatctgtttgttggcgtcaccgtcgaaaatttcaatcgt
ttaaagaaacactacgagagcggcgctgtgaatctctttctgaccgacacgcagagagcc
tggtacgaaaccctgaaaaaagcagcgaataagaaaccgcgaaaggtggaaaggagaccg
gtggaatattggcgcggacgaatgttcgacgtgattaaaagctccaaatttgaatggatg
atatttgtttttattctcctcaacttgattgtcttgacgttaaaacatcatggacagagt
gaaaccatcaccagcttactcaaatacagtaatcttgcttttactgtcgtattcttcctc
gaggccgctctcagaatttttgcccagcgtatggagtatttcaaagatgcgtggaatgtt
ttcgacttcgccatcctcacgttctcagttgcagcactaatcatggaggcattgagtcag
tccttcatcattacccccactatattccgcgtcgctcgtgtatttcgcgttggtcggcta
cttcgcttctacacaaacatgcgtggagttcggcgtcttctaattaccttactaatatcg
ttaccagccctcgtaaatatcggcgcattgctcttccttattatatttatctatgcaatc
atcggaatgtcaatgtttgcccacgtgaagcatacgggtgccgtcgacgatatggtaaac
tttgagactttcgtcaactcgatactgctactttttcgactttctacctccgctggatgg
aatgatgtactagaaccgttaatgattcaaccacccgactgcgatctttctcacaaagac
cttccaaatggtaactgtggccttccgtcctttgcagtttcctattttgtatcgtttgtt
ttgattacatcgttaatcatcgtgaacatgtacattgcaatcattatggagaatctacac
gaagcatgccgagcggaaaacactggcttaaccgaggaagacctggatatgttctacaaa
aattggcaaatctatgatccacgtgccacccaatacatccctcacagccatctctcggat
tttgtggattcattggatgaaccaatgagaatttcgaagccgaacaaatatgcttgcata
aatttacacatacctattcaccagggagacaggattcattgcgttgacgttatacaagct
cttgttcgccgacttcttggagatattgaacatgatgacgcagaaatgtttagttacata
cagacgaaagtcgaggaagcttttcttgctgcctttcctgacagggcaacgcagctaact
aggacaacgacgttcgagcgtaatcaagagaactgcgctgcccagatcattcaaaaagcc
tggcgcgggagaatgaaaaggaatgaagattcaaggaaaaaatcatgtccttcatag
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integrated database retrieval system
