Xenia sp. Carnegie-2017 (soft corals): 124433435
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Entry
124433435 CDS
T08024
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 1-like
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xen03021
]
124433435
03036 Chromosome and associated proteins [BR:
xen03036
]
124433435
Transcription machinery [BR:
xen03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
124433435
Chromosome and associated proteins [BR:
xen03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
124433435
SLIK complex
124433435
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
Helicase_C
CDH1_2_SANT_HL1
CHD1-like_C
Chromo
ResIII
HDA2-3
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
124433435
NCBI-ProteinID:
XP_046839159
LinkDB
All DBs
Position
Unknown
AA seq
1610 aa
AA seq
DB search
MTEVEEDLNSSDSGSDDGDEDDDEDEVNITSGEEETPNAQNTSQLNKKNHSSWLNRGNVA
KDINLSDENSDSDSSDSQSEVDEADRVQQEENKNPVSAASYHSSSPSSKKERFWEQDPDV
YGIRRSVRSRKEPVRYTVPGGQDDTDEESQPKKRPAKASKEAVQRLKRRRVSSSDWPTQS
SESASDSSDTSSPERRSRPLPRATSRLPGESKRAANNKGGGGKRVFKDSDEDHSRVSSRK
ATGNVCYKEESEAEETDEDDIIEVSADAVVDYEDDDRETIEKVLSTRIGPAEWTGARTTM
YSSEYEEMLHQVFDNQEKEKLSQHFLIKWKGWSHLHNTWESLETLKQQNAKGMKKLDNYV
KRMEEIERWKKHAVPEDVEYFECQEQMNLDLFEEYQQVERVIGHSNVKGVDEFGKSVNQV
DYLCKWAGLPYSEASWEDGPLVSKIGFQEKIDSYLKRERCDRVPNKNERFPKQKPKFIPL
KKQPSFLSKSSGLELRDYQLGGLNFLTHSWSKYNSVILADEMGLGKTIQSISFLSNLVNS
YGVWGPFLLVVPLSTIAAWQREFTLWSPELNLVVYLGDAVSRKKIQEFEFYHSSVKNKLK
FNALLTTYEILLKDKDVLRTINWSALLVDEAHRLKNDDSLLYKVLFDFTTHHRVLITGTP
LQNSLKELWSLLHFIMPNRFSSWEDFEEKHATTDEKESGYSNLHKEIEPFLFRRVKKDVE
KSLPAKVEQILRVEMSSVQKQYYKWILTKNFKMLNKGMKGNSNTFLNIVMELKKCCNHSA
LIRPVDEYGDLQSILQGSGKLMLLDKLLVRLKETGHRVLIFSQMVRMLDILADYLQRRHF
NFQRLDGSIKGDIRKKALDHFNAEGSEDFCFLLSTRAGGLGINLATADTVVIFDSDWNPQ
NDLQAQARAHRIGQKNQVNIYRLVTKGSVEEDIVERAKRKMVLDHLIIQRMDTTGRKVLS
KANTAPSANTPFNKEELSAILKFGAEDLFKEGDGERDKELQEMDIDEILKRAETRDSDDQ
PSTMGDELLSQFKVADFVSMDFEEDPKVEENTTSGEGKTWEDIIPESERKSLAAEEEQQK
QLELFLPKRSRKSVKKMNVGVNDQDQDKKPKLKRKRKTASGSSDDDADDNSKKKRGRPRT
VKREDIEGFSDQEIRRFIKSYKKFGRPMTRLDVIAIDAELEDKTYEDVVKLANAIRDGCV
KEMKEYDERLKLDPDFDGKKRGASLRIAGVSVNAPSLLKHEAELEPLADEMPSNPEERKK
YRFTIAAKSVHWDIEWDVKDDSMLLVGCYEHGLGSWDAIKDDPNLGLSKIMPPGNLRPQD
KHLQTRAXYLVRLLKQDGIRRKAEALRQSSEKLKKEIKQLAKAKKTKPKGAAKKDDEKKQ
KIKTGKKTSVEQNSTPVPGGDKDKNTVVNESITENAKNDHPKDDGDVKNEKSKKFKKKTE
KKTASKAEESKATGGIVESSKPSDVPLHVVADMDQKTFELCKEKMRPVKRSLKLLENPGD
NLTETEHVEQTRQCLLKIGDHILTMTSDYEDAEVASEWRSTLWSFVSKFTAFNAKKLCKL
YKHACKKREEDKKNKQHTKKDGPKHHKSNSIKRPLPVGPRRITTENNMIL
NT seq
4833 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggttgaagaagatctaaactccagtgactcaggcagtgatgatggtgatgaa
gatgatgatgaagatgaagttaatattaccagtggcgaagaagaaaccccaaacgcacag
aatacatcacagttaaataagaaaaatcattccagttggttgaatcgtggaaatgtagcc
aaggatataaatctctctgatgagaacagtgattctgacagttcagatagccaatcagag
gtagatgaggctgatcgtgtgcagcaagaagaaaataaaaatccagtctccgctgcttca
tatcatagttcctcaccaagttcaaaaaaagaaaggttttgggaacaagatccggatgtt
tatggtatacggagatcggtccgtagtcggaaagagcctgtgcgctacactgtccctggt
ggtcaggatgatactgatgaggaatcacagccaaaaaaacgtccagccaaggcttcaaaa
gaggctgtacagagactaaaaagaagacgtgtttcaagttctgattggccgactcaaagc
agtgaaagtgctagcgactcctcagatacgtcatctcccgagagaaggtcacgtccatta
ccacgtgcaacatcgagactgcctggcgaatcaaaacgggctgctaataacaagggaggt
ggagggaaacgtgtcttcaaagatagtgatgaagatcatagtagggtctcaagcagaaaa
gcaactggcaatgtctgttacaaagaggaaagtgaggctgaagagacggatgaagatgat
attattgaagtcagtgctgatgctgttgttgactatgaagacgatgatagagagaccatt
gaaaaggtccttagtacacggatcggacctgcagaatggactggggctcggacaacaatg
tattctagtgaatatgaagaaatgttacatcaagtatttgacaatcaagagaaggagaaa
ctgtcacaacactttttgatcaagtggaagggctggtcacatcttcataacacgtgggaa
agtctggagacgcttaaacaacagaatgcgaaaggaatgaagaaactcgataattacgtc
aagagaatggaggaaatcgaacgatggaagaaacacgccgtaccagaggatgttgaatat
ttcgaatgtcaagaacaaatgaacttagatctttttgaagagtatcagcaggtggagaga
gttataggccacagcaatgttaagggtgttgacgagttcggtaaatcggtcaatcaggtc
gactatctttgtaagtgggcaggattaccttactccgaggcatcatgggaggatggacct
ctggtctcgaagatcggcttccaggagaaaattgacagctacttgaagagggaacgttgt
gatcgagttccgaataagaacgaacgttttccgaagcagaaacccaaattcatcccgtta
aagaaacaaccatcatttctttcaaaatcatctggtttagagcttagggattatcaactt
ggtggacttaatttcttgactcattcttggtcaaagtacaactccgtgatccttgctgac
gagatgggacttggaaagacaattcaaagtatttcctttctttcgaacctcgtcaatagc
tacggtgtatggggaccttttttactggtcgtaccgctgtccacaattgcagcttggcag
cgagagttcacactctggtccccagaacttaatcttgtcgtctacttaggagacgccgtt
agtcgtaaaaagatacaagaatttgaattctatcacagttcggtaaaaaataaactgaag
ttcaacgccttacttacaacatacgagattttactcaaagataaggatgttctacgtaca
ataaattggtctgccttgctagtcgacgaggctcatcgtctgaagaatgacgactcgctg
ttatataaagtattgttcgatttcacgacgcatcaccgtgtgctgatcacaggcactcct
ttgcagaattccttgaaggaattatggagtttgttacattttataatgccaaacagattt
tcatcatgggaggactttgaagaaaaacatgcaacaacagatgagaaagaaagcggttac
tctaatcttcataaagaaattgaaccgttcttgttccgtcgtgtaaagaaggatgttgaa
aagtctcttcctgccaaggttgagcaaatacttcgcgtggagatgtcctccgtacaaaaa
caatattacaagtggatattgacaaagaatttcaaaatgctcaacaaaggaatgaaaggg
aacagtaacacgtttcttaatatcgtcatggagctaaagaaatgttgtaatcactccgca
ttgattcgacctgttgacgaatatggcgacctacagtcgatacttcaaggtagcggtaag
ctaatgcttctcgataaacttctggttcgtcttaaagagacaggacatcgcgtgttgatt
ttctcacaaatggtgagaatgcttgacatacttgccgattatcttcagcgtcgacacttt
aattttcagagactggatggctccataaaaggcgacatcagaaagaaggcattggatcac
ttcaatgcggaaggatctgaggacttctgtttccttttgtcaacacgagctggaggtctg
ggaattaatttggcgaccgctgacaccgtcgtcatattcgactcggattggaatcctcag
aatgatcttcaggctcaggctcgagcccatcgtatcggtcaaaaaaatcaggtgaatatt
tatcgtctggttacgaaaggcagcgttgaagaagatatcgtagaaagagctaaaaggaaa
atggttttagatcatctaatcatacaaagaatggacacgactggtcggaaagttctttct
aaggcgaacactgcaccttctgctaacacgcctttcaacaaggaagaactgtccgctatt
ttgaaatttggtgccgaagatcttttcaaggaaggcgatggtgaacgagacaaggaatta
caggagatggacatcgatgaaattctaaagcgtgccgagacaagagattctgatgaccag
ccgtcaacgatgggagatgaattgctctcacaattcaaggtcgccgattttgtctcgatg
gacttcgaagaggatccgaaagtcgaggagaacacgacatctggcgaagggaaaacgtgg
gaggatataatcccggaaagcgaaagaaaaagtcttgccgctgaagaagaacaacaaaag
caacttgaactgtttttgccaaaacgatcaagaaaatcagtgaaaaagatgaatgtcggt
gtaaatgaccaagaccaagacaagaaaccgaagcttaaacgaaagaggaaaacggcaagt
ggttcatccgatgatgatgcagatgacaactccaagaagaaacgtggacgacctcgaacc
gtgaaacgagaggatatcgagggattcagtgatcaagaaataagaaggttcattaaaagt
tataagaaatttggacgtcctatgacaagactggatgtgatcgccattgacgcagaactt
gaagacaaaacgtacgaagacgtcgtcaagcttgcgaacgccattcgtgacggctgcgtc
aaagaaatgaaggagtacgatgaacgactgaaactggatcctgactttgacggcaagaaa
cgaggtgcatcgttacgcattgctggcgtaagtgtgaacgcgccatcattgcttaaacat
gaagcagaattggagccgttagccgatgaaatgccgagtaatcccgaggaaagaaagaag
tatcgctttaccattgctgccaaaagtgtacattgggatatagaatgggatgtgaaggac
gatagcatgttattagtgggttgctatgaacatggtttaggcagttgggatgccattaaa
gatgatccaaatcttgggttgtcaaagataatgccaccgggaaatctaaggccccaagac
aagcatcttcaaacgcgcgcgngatatctcgttcgacttctcaagcaggatggtataaga
agaaaagcggaagcacttagacagtcatctgaaaagcttaagaaggaaataaagcaattg
gcgaaagcgaaaaagacgaaaccgaaaggtgccgcgaaaaaagacgacgaaaagaaacag
aaaatcaagaccggcaaaaaaacgtcagttgagcagaattcgaccccagtccctggcggc
gacaaggataaaaacacagttgttaatgaaagtatcacggaaaacgcgaagaacgatcat
cctaaagatgatggcgatgtgaagaacgagaagtcaaagaagtttaagaaaaagactgag
aagaagacagcgtcgaaagctgaggagagcaaagctactggaggaattgtcgagagcagc
aagccaagtgatgtccctttacatgtcgtcgcagatatggatcaaaaaacatttgaattg
tgcaaagagaaaatgcgtcccgtgaaacgatcgttaaaacttctcgagaatcccggagat
aatttgaccgaaactgaacatgtcgaacaaaccagacagtgtttgttaaagatcggtgat
catattttgacgatgacgtctgattatgaagatgccgaggtggccagcgaatggaggagc
acgttatggagtttcgtgtcgaaatttacggcatttaatgcgaagaagttatgcaaactt
tacaaacatgcctgcaagaagcgggaagaggacaagaaaaacaaacagcacacaaagaaa
gatggcccaaagcatcacaaatcaaattcaatcaagagacccctgccggtagggccccgg
agaatcacgacagaaaacaacatgatcctgtga
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integrated database retrieval system
