Xenia sp. Carnegie-2017 (soft corals): 124433791
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Entry
124433791 CDS
T08024
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xen03021
]
124433791
03036 Chromosome and associated proteins [BR:
xen03036
]
124433791
Transcription machinery [BR:
xen03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
124433791
Chromosome and associated proteins [BR:
xen03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
124433791
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
S1
SPT6_acidic
SH2
Spt6_S1
HHH_9
Tex_YqgF
Tex_N
HHH_3
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
124433791
NCBI-ProteinID:
XP_046839535
LinkDB
All DBs
Position
Unknown
AA seq
1590 aa
AA seq
DB search
MSDFFDSEAEESGEEIGSGSEEDVAEDEEIAQQEETTAIDDANDIINDDDSDGDEEDEGE
DNIRTRKRKDFHDAVDEEDLDLIEENLGINLDRRKYKRLKKLKPIDSDEEEDDRGSVGGH
SADEREALAHELFEDDEIEQPSRAISTTPVEPTNDQYAVLDDSESDVEDDFIVDDDNQPV
HERSRKKGGSRTQNRALQEAQDIFGLDFDFGDFEKFGQEEYSDEDRDEYEEEYSDEEGQQ
GRRGKKKRQKKTIFDVYEPSELKKIHLTDRDNEIRINDIPERHQLREVPMKTAEDKELTD
EAEWIYRHAFMTMPITNQEIQEGEKFIQTTLTKPPSAIPKIREALNLMRNKYFEVPFIAA
YRKEYVEPELNIEDLWRIWLFDEKWCQLSSRKNNLKRLFEQMQTYQYNKLRENPDKPLDE
DERILEQDDVERLDAVQTMEELRDIYSHFVLHYGHEIPAMRLSRKKKSVNDADETVEEVE
MNDRLKIPKRRDFYTICREAGLGLFAKKFGLSPEQFGENLRDNYQRYETEQYPMEPREAA
EEHLSNMFLTTDAVLEGTRHMVAMQIARDPLVRQCVRQVFYERAKINISPTKRGKKEIDR
DHECYSFKYIKNKPVSDLRGDIFLQMHKAKEEGLIQLDIGIDLDRGFHSYYDEAKQLYYR
DEFSNLVQMWNAQRTQALYRTFYQVLYPLFTKELEEKLLQEAKDFVVKCACRRLRSLVEV
APYQAEQHSDEEYDMFTGPRGLRVLSVAVPSDPHQPIFFVMLNGGGQVGDFLKLSFIMKK
RNSNRSKEKEKKEEDLESLKQFVLKKRPHVIVIATGSRDSLTVYEDVKISIRELEQENQI
SPINVELIDHEVAEIFEKSSRAETEFREYPMILRRAISVGRRIQDPLAEFAGLCVDEDEL
LCLRLHPKQNLISKEVLLKHLRIVFVTVVNEVGVDPNRILDFPHTSGLIQFICGLGPRKS
LALIKSLRKEGTKLENRSQLVTVCGMGPNGFLNTAGFVKIDTSALNDNTVNYIEVLDGSR
IHPETYEWARKMAVDALEYDETSEESNPSAALEEILESPERLRDLDLDAFAEELERQGFG
NKRITLYDIRDELFGRYKDRRPPYREMSVDDRFRLLTGETRETLFYGKLITCVVSGFAYR
KPNRERLENVDPKKDEETGLWQCPFCGNNTFADLGEVWTHFDNGSCPGQIVGVRTRLENG
INGFVPTKLISDKHIKSPQERVKVGSMIHCRVTKINAERFQVDLTCRTSDLEDREGKYSR
LKDTYFDQASEDKDKKAVKDAEKKANRPSYIKRVIVHPAFQNIAFKDAEKKLATSEQGEC
IVRPSSKGSDHLTVTWKVDEGIYQHIDIKEQGKENAFSLGKSLWIENEEFEDLDEIIARH
IQPMASFARDILSHKYYKDTEGGSINTMQEVLKAEKTKNPKRIPYFLSASKEFPGKFLLG
YMPRNKPRTEYVSVTPDGYRYRGRVHASLNALFKWFKEHFRDPVPGQPSRQRASNNMDTG
TPFTPGEYTPVRDATPRGTTPRSTPQIDPSKLLPQLRQAFPGGMLKNPHMYNNLTAAVTN
QSPQTSRGQYPQFGYTQQFPQQYQQPQYSR
NT seq
4773 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacttttttgatagtgaagcagaagagtctggagaagaaattggaagcggtagt
gaagaggatgtcgctgaagacgaagaaattgctcagcaagaagaaacgaccgccattgat
gatgccaatgatattataaatgacgatgacagtgacggtgatgaagaggatgaaggggaa
gacaatatacgaacccgcaagagaaaagattttcacgatgcagtggatgaggaggatctt
gatttaatcgaagagaatcttggaattaatttggatcgaagaaaatataagcgtttgaaa
aaactcaaaccaattgactctgatgaggaagaagatgacagaggatcagttggtggacac
agtgctgatgaacgtgaagcactagctcatgaactctttgaagatgatgaaattgagcaa
ccatcgagagcgatatctaccacaccagtggagccaactaatgatcagtatgcagttctt
gatgactcagaatctgatgttgaagatgattttattgtggatgatgataaccaacctgtc
catgaaaggtctcgtaagaaaggaggaagccgtactcaaaatagggcattgcaagaagca
caagatatatttggtttggattttgattttggcgattttgagaaatttggtcaagaagaa
tattcagatgaggatcgtgatgagtacgaagaggaatatagtgatgaggagggacaacag
gggagacgagggaagaaaaaaagacaaaagaaaacaatctttgatgtatatgaaccaagt
gaacttaaaaagattcatctcactgatcgagacaatgaaatacgtattaacgacattcca
gaacgtcatcagttacgtgaagtaccaatgaaaacagcagaagataaagaactgaccgat
gaagcagagtggatataccgtcatgcatttatgacaatgccaatcacaaatcaagaaatc
caagaaggagagaaatttatccagacaacactaactaagcctccatcggccattcctaaa
atacgcgaagctcttaatctcatgagaaataagtactttgaggtcccatttattgctgct
tatcgtaaagaatatgttgaaccagaactgaatattgaagatttatggcgtatttggtta
tttgatgaaaagtggtgtcaattgagttccagaaaaaataatttgaagcgactgttcgag
caaatgcaaacatatcaatacaataaattacgtgaaaatcctgataaaccattggatgaa
gatgagaggattctggaacaagatgatgttgaaagacttgacgccgttcaaacaatggag
gaattacgagatatatactcacatttcgtcttacactatggtcatgagattccagccatg
agattatcaagaaaaaagaaatcagtgaatgacgccgatgaaactgtcgaagaagtggaa
atgaatgatagattgaaaatccccaaacgacgtgatttctacacgatctgtcgggaggct
ggtcttggtttgttcgccaagaagtttggtttgtcacccgagcagtttggtgaaaatctt
cgggataattatcaacgttatgagaccgagcaatatcctatggagcccagggaggctgct
gaagaacatctctccaatatgttcttgacgaccgatgccgtacttgaagggacacgtcac
atggttgccatgcaaattgcacgtgatcctcttgtcagacaatgcgttcgacaagtcttc
tacgagcgtgctaaaatcaacatttcgcccacaaagagagggaaaaaggagattgaccgt
gatcatgaatgttattcattcaaatacatcaaaaataaacctgtttctgatttacgagga
gatatttttcttcaaatgcacaaggcaaaggaggaaggccttattcaacttgatattggc
attgatttagatcgtggattccattcttattacgatgaagcaaagcaactctattatcgt
gatgagttcagtaacttggtgcagatgtggaacgcacagcgaacccaagctctttatcgg
acattttatcaagtactttatcccttgttcaccaaggaactcgaagagaaattattacaa
gaggccaaagattttgtcgtcaagtgcgcatgtcgtcgtctccgttcccttgttgaagtt
gcgccttatcaagcagaacaacatagtgatgaagagtatgatatgtttactggtcctcgt
ggccttcgtgttctctccgtagcagtaccttctgatcctcaccaacccatcttctttgtc
atgttaaatggtggcggtcaagttggagattttttgaagttgagcttcataatgaagaag
agaaattcgaatagaagtaaagaaaaagaaaaaaaggaagaagatcttgagtcattgaag
cagtttgttttaaagaaacgaccccacgtgattgttatagctaccggaagtcgagattca
ttgactgtttatgaagacgtgaagatatcaatcagggaactggaacaggagaatcaaata
tctccaattaatgttgaattaattgatcatgaagtcgccgaaatttttgagaaatcctca
agagccgagacggaattccgtgaatatccgatgatattacgacgtgctatttccgttggt
cgacgtattcaggacccacttgctgaatttgctggactttgtgtagacgaagacgaatta
ttatgtctgagacttcatccgaaacagaatttgatttctaaagaagtacttctgaaacac
ttgcgaattgtgtttgtcactgttgtcaatgaagtcggagtggatccaaatcggattttg
gatttccctcacacttctggtctgatacagtttatctgtggattgggaccaagaaaaagc
ttagctttaatcaagagccttcgtaaggaaggaaccaaactcgaaaatcgttctcaactt
gtgactgtgtgtggcatgggacctaatggatttctcaatacggctggatttgtaaagatt
gatacgtctgcgctaaatgacaatacggtcaattacattgaagttttggatggctcaagg
attcatcctgaaacttatgaatgggcgaggaaaatggcggtcgatgctctcgaatatgac
gagacatcagaagagtcaaatccttctgccgctttagaagaaatcttggaaagtcctgaa
aggctgagagatctagatctagacgcctttgccgaggagctggaacgtcaggggtttggg
aacaagcgtatcactctttatgacatccgagatgaattgtttggacgttacaaagaccgc
agaccaccttatagggaaatgtccgttgatgatcgtttccgattgctaaccggggaaaca
cgagaaacgttgttctatgggaaactgattacgtgcgttgtatctgggtttgcatatcgg
aaacccaaccgagagagactggagaacgttgatccaaaaaaggatgaagagactggactc
tggcaatgtccattttgtggtaacaatacgtttgcagaccttggtgaggtatggacacat
tttgataacggtagttgcccaggacagattgtcggtgttcgaacgagacttgaaaatgga
ataaacggttttgttccgactaaattgattagtgataagcacataaagtcaccacaagag
agagtaaaggttggttcaatgattcactgtcgtgttaccaaaattaatgccgaaagattc
caagttgatctcacatgtagaacttctgatttggaggaccgagaagggaagtacagtcgt
ctcaaagacacgtactttgaccaagccagtgaggacaaggacaagaaagctgtcaaagat
gcagaaaagaaagcaaacagacctagttacataaaaagagtgattgttcatcctgcgttt
caaaatatcgctttcaaagacgcagaaaagaaactggcaacaagtgagcaaggagagtgt
atcgtcagacccagtagtaagggatctgatcatctgaccgtcacgtggaaggtagacgaa
ggaatctatcagcatatcgacattaaagaacaaggaaaggaaaatgctttcagtttaggc
aaatctctatggatcgaaaatgaggagtttgaagacttggacgagataattgctcgacac
attcagccaatggcatcctttgcacgtgacatactttcccataaatactacaaggacact
gaaggaggaagtatcaacacgatgcaggaggttctgaaagcagagaaaacaaaaaatccg
aaacgcattccatattttctctctgcgtcaaaggaatttccaggaaagtttcttctcggc
tatatgcctcgaaacaaacctcgtacagagtatgtctctgtgactcctgacggttacaga
tatcgcggtagagtacatgctagtcttaatgctcttttcaaatggttcaaagaacatttc
agggatccagtacctggacaaccgtcaaggcaacgagcttcaaataacatggataccgga
acacctttcactcccggggaatatacccccgtacgtgatgcaacaccccgaggaacgaca
ccgaggagtaccccgcagattgacccgtcaaaacttttgcctcaacttcgtcaagccttc
ccaggtggtatgctaaaaaatcctcatatgtacaacaatcttacggcagctgtaaccaac
cagagtcctcaaacatctcgaggacagtatcctcagtttggctacacacagcagtttcct
caacaatatcaacaaccgcagtattctaggtag
DBGET
integrated database retrieval system
