Xenia sp. Carnegie-2017 (soft corals): 124434167
Help
Entry
124434167 CDS
T08024
Name
(RefSeq) small nuclear ribonucleoprotein Sm D3-like
KO
K11088
small nuclear ribonucleoprotein D3
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124434167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xen03019
]
124434167
03041 Spliceosome [BR:
xen03041
]
124434167
03032 DNA replication proteins [BR:
xen03032
]
124434167
Messenger RNA biogenesis [BR:
xen03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
124434167
Spliceosome [BR:
xen03041
]
Complex A
U1 snRNP components
Sm proteins
124434167
U2 snRNP components
124434167
Complex B
U1 snRNP components
124434167
U4/U6.U5 tri-snRNP components
124434167
Complex C
U2 snRNP components
124434167
DNA replication proteins [BR:
xen03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
124434167
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
124434167
NCBI-ProteinID:
XP_046840006
LinkDB
All DBs
Position
Unknown
AA seq
133 aa
AA seq
DB search
MSIGIPIKILHEAEGHIITLETLTGEVYRGKLIEAEDNMNIQMSEITLTARDGRVSQLQN
VFIRGSKVRFIILPDMLKNAPMFKKQRDKGSAAGRGKSAILRAQAAARGRGDHFRGRGRA
GHRGGGRGFQHRR
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgtcgataggtattcccatcaagattttgcatgaagctgaaggacatattattactttg
gagacattaacgggagaggtttatcgaggtaaactaatcgaggctgaagataatatgaac
attcaaatgtcagaaataacgttgactgcgcgagatggacgtgtgtctcaactgcaaaac
gtgtttatccgtggaagtaaagtccgttttataatactaccagacatgttgaaaaatgca
cctatgtttaagaagcaaagggataaaggctcagctgctggacgaggaaagtcggctatt
ttaagagcacaagctgcagctagaggccgtggtgaccatttcagaggccgaggaagggct
gggcatagaggtggcggaagaggatttcagcatagaagataa
DBGET
integrated database retrieval system
