Xenia sp. Carnegie-2017 (soft corals): 124434305
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Entry
124434305 CDS
T08024
Name
(RefSeq) clathrin heavy chain 1-like
KO
K04646
clathrin heavy chain
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen04142
Lysosome
xen04144
Endocytosis
xen05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124434305
04142 Lysosome
124434305
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
124434305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xen04131
]
124434305
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xen04147
]
124434305
Membrane trafficking [BR:
xen04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
124434305
Exosome [BR:
xen04147
]
Exosomal proteins
Proteins found in most exosomes
124434305
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
ANAPC3
Isoamylase_C
Motif
Other DBs
NCBI-GeneID:
124434305
NCBI-ProteinID:
XP_046840150
LinkDB
All DBs
Position
Unknown
AA seq
1688 aa
AA seq
DB search
MAQVLPIKFQEHLQLQNIGINAANIGFSTLTMESDKFICVREKIGETAQVVIIDMDNANN
PIRRPISADSAIMNPKSKVIALKAGRTLQIFNIEMKSKMKAHNMTEDVTFWKWISVNTVA
LVTETAVYHWPMEGDSQPQKMFDRHSSLAGCQIINYRTDHDQKWLLLIGIQAQQNRVVGA
MQLYSVERKVSQPIEGHAAAFTQFKVEGNPLESTLFAFAVRGPQGGKLHVIEVGSPPSGN
QPFQKKAVEVFFPPEAQNDFPVAMQVSQKHGIVYLITKYGYVHLYDVESGTCIYMNRISG
DTIFVTTPHDPTSGIIGVNRKGQVLAVSVDEENIVSYITNVLQNPDLALRIAVRNNLGGA
EELFVRKFNNMFSNMQYAEAAKVAANAPKGILRTPQTIQRFQQVPAQQGQTSPLLQYFGI
LLDQGQLNKYESLELCKPVLQQGRKQLLEKWLKEEKLECSEELGDLVKQVDPTLALSVYL
RANVPHKIIQCFAETGQYQKIIIYAKKVNFTPDYIFLLRSVMRVNPEQGSTFASMLVQDE
GEPLADLSQIVDVFMETNQVQACTSFLLDALKNNRPNEGHLQTRLLEMNLLTAPQVADAI
LGNQMFTHYDKAHIAQLCENAGLLQRALEHYTDIFDIKRAIVHTHLLNPEWLVNYFGTLS
VEDSMECLKAMLTNNIRQNLQICVQVATKYHEQLGTTQLIELFESFKSFEGLFYFLGSIV
NFSQDAEVHFKYIQAACKTGQIKEVERICRESNVYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRVPVVVGGLLDVDCSEDIIKNLILVVRGQ
FSTDELVEEVEKRNRLKLLLPLLEARVHEGSEEPATHNALAKIYIDSNNNPERFCRENPF
YDSKVVGKYCEKRDPHLACVAYERGQCDMELINVCNENSLFKSEARYLVRRRDPDLWANV
LVEDNQYRRQLIDQVVQTALSETQDPEDVSCTVKAFMTADLPNELIELLEKIVLENSVFS
EHRNLQNLLILTAIKADRTKVMEYITRLDNYDAPDIASIAIGSELYEEAFAIFKKFDVNT
SAIQVLIENVQNLDRAYEFAERCNEPDVWSLLAKAQLEQSLVKEAIDSFIKADDPSVYTE
VVAIARKEDKYEDLVKYLQMARKKAREGFIETELAFALAKTNRLAELEEFISGPNHAQIK
EVGDRCFNDKMYEAAKILYNNISNYGCLASTLVHLGEFQAAVDGARKANSTRTWKEVCFA
CVDSEEFRLAQMCGLHIVVHADELEELINYYQNRGHFQELIQLLEAALGLERAHMGMFTE
LAILYSKYKPMKMREHLELFWSRVNIPKVFCAAEQAHLWAELVFLYEKYEEYDNAILTMV
AHPTVAWKEAQFKDIVTKVANIELYYKALQFYLDYKPLLLNDLLIVLTPRMDHTRAVTYF
RKINHLPLVKPYLRSVQNHNNKVVNEALNDLLIDEEDYNGLRASIDAFDNFDNIALAQRL
DKHELVEFRRISAYLYKGNNRWQQSVELCKRDKLYKDAMIYSAESRDPEIAENLLNWFLE
NKNYECFAAALFTCYDLLHPDVVLELAWRNNILDFAMPYIIQVLKEYINKVDNLATSEKE
RKDQEETKQDQPLVFGSDQLMLTAGPNMAAAPAPGMVPGMAPGMMPPGGPMMYTGGYPQA
ATGFPQQY
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagttttaccaattaaatttcaggagcatttgcagcttcaaaatattggcatc
aatgcagcgaacataggtttctctactcttaccatggagtctgataaatttatctgtgtt
cgtgagaagattggtgaaacagcacaagttgtcattattgacatggacaatgcaaataat
ccaattcgccgacctatctcggcagattctgctataatgaatccaaaatccaaagtcatt
gctttaaaagctggacgtacattgcaaattttcaacattgaaatgaaaagtaaaatgaaa
gctcacaacatgactgaagatgttactttttggaaatggattagtgtcaatactgttgct
ttggttacagaaacagctgtttatcattggccaatggaaggtgattcgcaacctcagaag
atgtttgatcgtcattcaagtttggcaggctgtcagattatcaactatcgtacggatcat
gaccagaaatggctactgctcattggcattcaggcacaacaaaatcgtgttgttggagca
atgcaattatattctgttgaaagaaaagttagtcagccaattgaagggcatgcagctgca
ttcacacagtttaaggttgaaggaaatccccttgaatcaacattatttgcatttgctgtt
cgtggccctcaaggaggcaagttacatgtgattgaagtggggtcaccaccatctggaaac
caaccttttcaaaagaaagcagttgaagttttctttcctcctgaagctcaaaatgacttc
cctgttgccatgcaggttagtcaaaaacatggtattgtatatctcatcaccaaatatggt
tatgttcatctttatgatgttgaaagtggtacatgcatttacatgaatcgaatcagtggt
gacaccattttcgtgacaactcctcatgacccaacaagtggtattattggtgttaataga
aagggacaggttcttgctgttagcgttgatgaggaaaatattgtatcgtatatcaccaat
gtacttcaaaatcctgaccttgcattgcgcattgccgtacgaaataacttgggaggagca
gaagagctgtttgtgaggaagttcaataacatgttcagtaacatgcaatatgcagaagct
gccaaagtggctgcaaatgcaccgaagggtatccttagaacccctcaaaccatccagcga
tttcaacaagtaccagcacaacaaggacaaacatcacctttgctgcaatattttggtatc
ttacttgaccaaggacaattaaataagtatgagtctcttgaattgtgtaaaccagtgtta
caacagggtcgtaaacaactgcttgagaaatggctgaaggaagaaaagcttgaatgtagt
gaagaactcggtgatttagttaaacaagttgatccaactcttgcattgtctgtctattta
cgtgcaaatgttccacataaaattattcaatgttttgcggagactggacagtatcaaaaa
atcatcatttatgcaaagaaagtgaatttcactcccgattatatttttcttttgcggagt
gtaatgcgtgtgaaccctgagcaaggaagtacatttgcaagcatgttagttcaagatgaa
ggtgaacctcttgctgatctcagtcagattgtcgatgtatttatggaaacaaatcaagtt
caagcttgtacatcatttctccttgatgctttgaaaaacaaccgtccaaatgaaggtcac
cttcaaacacgtttgctggaaatgaatttactcactgctcctcaggttgcagatgcaatc
cttggaaatcaaatgttcactcattatgacaaagctcacattgctcaattgtgtgaaaat
gcaggccttcttcaacgggctttggaacattatacagacatttttgacattaaaagagcc
attgtacatactcatcttctaaaccctgagtggttggtaaattattttggcactttgtct
gtcgaggactcaatggaatgtttgaaagcaatgttaacaaataacatcagacaaaatctt
caaatttgtgttcaagtagccaccaaataccatgaacaattaggaacaacacaacttatt
gaattatttgaatcatttaaaagttttgaaggtttgttttattttcttggatcaattgtc
aactttagtcaagatgcagaagtacatttcaagtatattcaagctgcatgtaaaactgga
caaattaaagaagttgaaagaatttgtcgtgaaagtaatgtttatgatccagagcgagta
aagaatttcttgaaagaagccaagcttacagatcaattgcctttgattattgtttgtgat
cgctttgactttgttcacgatcttgtcctttatctttaccgaaataatctacagaaatac
attgagatttatgtccagaaggttaatccatctagagttcctgttgttgttggtggtctt
ttggatgttgattgttccgaggacatcattaaaaatcttatacttgttgtacgaggacag
ttctcaactgatgaattagtggaggaagttgaaaaacgaaaccgtttgaaattgcttttg
ccattgcttgaagctcgtgtacatgaaggctcagaagaaccagctacccataatgcactt
gcaaagatatatattgactcaaataataatcccgaacgtttttgtagagagaatccattc
tatgacagcaaagtcgttggtaaatattgtgaaaaacgtgatccacatctcgcatgtgtt
gcatatgaacgtggacaatgtgacatggaactaattaatgtatgcaacgagaattcatta
tttaaaagcgaagcgcgttatcttgtcagacgtcgtgatccggatctttgggcaaatgtt
cttgttgaagacaatcaatatcgtagacagcttattgaccaagtggtacagactgccctt
tctgagactcaggatcctgaggatgtgtcttgcacggtgaaagcttttatgacagctgat
ctaccaaatgaacttattgaactgcttgagaagattgttcttgagaattctgtcttcagt
gaacataggaatcttcaaaacttgttgattttaactgctatcaaggcagatcgtacgaaa
gtaatggagtatatcactcgacttgataactatgatgctccagatattgcaagtattgct
attggaagtgaattatacgaagaagcttttgccatttttaagaaatttgatgtcaacact
tccgctattcaggtccttattgagaacgttcaaaatcttgatcgtgcttacgaatttgct
gagcgctgtaatgaaccagatgtctggagtcttcttgctaaagctcaacttgagcagagt
cttgtaaaggaggcgattgattcgtttataaaggctgacgatccttcagtttatactgaa
gttgtcgctattgcaagaaaagaagacaaatatgaagatttagtgaaatatcttcaaatg
gcgcgaaagaaagctagagaaggatttatagaaacagaacttgcatttgctttggcaaaa
actaacagattagctgagttagaagaattcatttctggaccaaatcatgctcaaataaaa
gaggtcggtgaccgatgttttaatgataaaatgtatgaagcagcaaaaattctctacaac
aacatatcaaactatggttgtcttgcctccaccttggttcatctaggggaatttcaagct
gctgtggacggagcaaggaaagcaaacagtacgagaacgtggaaagaggtatgttttgca
tgcgtggatagtgaagagtttcgtttggctcaaatgtgtggtctacatatcgttgtccac
gctgatgaactggaagaactcatcaattattaccaaaaccgtggccatttccaagagcta
attcaactcctggaggctgcattaggactggaacgagctcatatgggaatgtttactgag
ctagctatcctttactcaaagtataaaccaatgaaaatgagggaacatcttgaattgttt
tggtctcgagttaacattccaaaggtgttctgcgctgcagagcaagctcatttgtgggca
gagctagtgttcttgtatgaaaaatatgaagagtatgacaacgcaattcttactatggtt
gctcatcctactgtggcttggaaagaagctcagtttaaagacatcgtcactaaagttgcc
aatatagagttgtactataaagctcttcaattctatctcgactacaaacctctcctgctc
aacgatctactcatagtcctcacccctcgaatggatcatacccgtgctgtgacctatttt
cgtaaaatcaatcatttaccgctggtcaaaccgtatcttcgttccgttcaaaatcacaac
aacaaagttgttaatgaggcgttaaatgatctcttgatcgatgaagaagattataatggt
cttcgtgcatccattgatgctttcgataattttgacaacatcgctttagcccagagactt
gataaacacgagttagtcgagttcagaagaattagtgcttatttatacaaaggaaacaat
agatggcagcaatctgtagagctttgcaaaagagataaactttataaggatgcgatgatc
tattcagctgagtcacgtgatcctgaaatagcagaaaatcttcttaattggttcttagag
aataaaaattatgaatgttttgctgcggcgttatttacgtgttatgatttactgcatcca
gatgttgtccttgaattagcgtggagaaataatattttggactttgccatgccttacatt
atacaagttttaaaggagtatataaacaaggtggacaatcttgcgacgtcggagaaagaa
cgcaaagatcaagaagaaacaaaacaggatcaaccattagtgtttggcagtgatcagttg
atgttaactgctggaccaaatatggcagcagcaccagctccaggaatggtaccaggaatg
gctccaggcatgatgcctcctggtggccctatgatgtacacaggaggctatccacaagct
gcgactggtttcccccagcaatattag
DBGET
integrated database retrieval system