Xenia sp. Carnegie-2017 (soft corals): 124434587
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Entry
124434587 CDS
T08024
Name
(RefSeq) LOW QUALITY PROTEIN: protein strawberry notch homolog 1-like
KO
K26273
protein strawberry notch
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xen03036
]
124434587
Chromosome and associated proteins [BR:
xen03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
124434587
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Helicase_C
Protamine_3
Motif
Other DBs
NCBI-GeneID:
124434587
NCBI-ProteinID:
XP_046840422
LinkDB
All DBs
Position
Unknown
AA seq
1366 aa
AA seq
DB search
MSRLNNGMERESDLLSCALLDIGLDLNPHESISSNGNVRPTGDEIDFTGASLSLSSTTNP
NDLLDWSYLLSNTNGNSFTTNHDDDLSSFLEPFNQSTRASHFTSGTGVHNGPYISSNLRE
TVLSKDGYTPLTATLRTNAAVDCSLRDLLSTDNDLGGSLAVKPAVSVVDVNKDISRKVAV
QKLWANEDMKLSDVKESTVDDDEEEDDELGYSDTYAQYWPSKLKIGKSHPDSVVETSSLS
SVAPPDVWYRLAIPKEVIDKHFLSALQLEAIVYACQRHEIILGDGSRAGFLIGDGAGVGK
GRTVAGIISENYLLGRKRALWLSVSNDLKYDAVRDLRDINCNVNVRTLNKFKYDAKLSSS
ENGSFKKGVLFATYSSLIGESQGSSKYRTRLSQIVKWCGSDFDGVIVLDECHKAKNLVPT
GSSKPTKTGKSVLELQEMLPKARVVYCSATGASEPKNMAYMSRLGIWGKGTPFKEFGQFI
QAVEKRGVGAMELVAMDMKLRGMYMARQLSFAGVTFDIKEVPLSEKFIQMYNASAILWEQ
AREKFALALTLAPDQAKIGKKLWAQFWAAHQRFFKYLCIASKVEAVVAIAQEAIKNGKCV
VIGLQSTGEARTLEQLGENGELNEFVSTAKGVFQALIEKRFPVANNKGRFVEDDFPKLSQ
VGKKRKSVRDLHKTRDKKIKKDEVFGRTFLSDNDDDISSVDDDNDNASLNNDSKSCDSND
DENGDDVIEIDSESDSDEDNWLKKIEKPKKKKKMRNGEHSSQTANNMEVLRAAGLHVNSL
NWSKPSRDSSSTAVKAAPIAKNSGSSTSFDDVFAKLEAAEKKNDNMNLSLVDYIKTTSLT
SEHYKNITPAEQCQVMKTEXLHKLDYIASYLPNNTLDKLMNDLGGPDKVAEMTGRKGRVV
SGKDGSVQYELRNERDVRLEMLNIAEKTRFMNGEKNVAIISEAASSGISLQADRRAKNQK
RRVHITLELPWSADKAIQQFGRTHRSNQVNAPEYLFLISKLSGEQRFASIVAKRLESLGA
LTHGDRRATESRDLSKYNFDNKYGRTALELVLKSVVGLESPIVKPPSDYQGDFFQDVRVG
LIGVGLVGANGILDKDSFNISKFLNRLLGLQVALQNGLFQYFTNTLEAVIQRAKRNGRYD
EGILDLGSNGEAVHRLSTRTFENIDASGSTELHTVSVERGLSWEQAQVKLQENEMADEGF
YLSKQVRNNKRTAILVKQVYNFGKKRFFRVYRPNTGMQLKMETLPEIQKKHDKVAIWTAE
PAWIEQYESSETQCSHSYWKGNCKRKVLGLSCVVGLRTRTYHILSGSVLRVWDIVEDVLS
TQGGNNSRMQIIRVRTMDGLRVVGSSIPTNCVEALSTRLSSSTANE
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggctcaacaatggcatggagcgcgagtcggatctcttatcttgcgctttgtta
gacattgggcttgatttgaaccctcatgaatcgatatcaagtaatggaaatgtaagaccg
actggagacgaaatagattttaccggtgcttcattgtcattatcatcgacaactaacccc
aatgatctcttggattggtcatatttactctcaaataccaacggaaacagtttcacaaca
aatcatgatgacgatttgtcgagctttttagaacctttcaatcagtctacgagggcaagt
cacttcacaagtggtactggagtgcataatgggccttatatttcttctaacttgagagag
acagttttgagtaaagatggttatactcctctaactgccacgctaagaactaatgctgct
gtagactgttcattgagagatctgctctcgacagataacgatttaggaggaagtttagcg
gttaaaccggctgtgagtgtcgtagatgtcaacaaagatatttcacggaaagttgctgtt
caaaaactttgggcaaatgaagacatgaaactcagtgatgtaaaagagtcaacagttgat
gatgatgaggaagaagatgatgaacttggctattcagacacatatgcacaatattggcct
agtaaattgaagattggaaaaagtcatccagattctgttgttgaaacaagttcgttatca
agtgttgcgcctccagatgtttggtataggttggcaattcctaaagaggttattgacaag
catttcttgtctgcattacaacttgaagccattgtttatgcttgtcagcgtcatgaaatt
atacttggtgatggttcaagagcaggatttttaataggtgatggtgcaggggttggaaag
ggtcgaacagtagctggtataatcagtgaaaactatctgttgggtagaaagagagcatta
tggttgagtgtatcaaatgatcttaaatatgatgctgttcgagatctccgagacatcaat
tgcaatgttaatgttcgcacgttgaacaagtttaaatatgatgccaagctgtcatcaagt
gaaaatggaagttttaaaaaaggtgttttgtttgcaacctattcatctttaattggtgag
agtcaaggatcatcgaaatatcgtacacgattaagtcaaattgtaaaatggtgtggttct
gattttgatggtgttattgttcttgatgagtgtcataaggcaaaaaatcttgtaccaact
ggctcatctaaacctacaaagacaggaaagagtgtcctggaacttcaagagatgctccct
aaggcacgtgttgtctattgcagtgctacaggtgcgtctgagcctaaaaacatggcgtat
atgtctcgacttggtatctggggaaaaggaacgccattcaaggaatttgggcagtttatt
caagctgttgaaaaacgtggtgttggggcgatggaattagttgccatggatatgaagctc
cgtggcatgtatatggctcgtcagttgagttttgccggagtaacgtttgatattaaagag
gttcctttaagtgagaagtttatacagatgtataacgcttcggcaatattgtgggaacaa
gcgagagaaaaatttgccttggcgttgacgcttgctcctgatcaggcaaagattggcaag
aaattgtgggctcagttttgggcagcgcatcagcgtttttttaaatatttgtgtattgct
tctaaagttgaagccgtcgttgctattgctcaagaggcaattaaaaatggaaaatgtgtc
gtcattggtttacagtccactggagaagcgcggactttggagcaacttggtgaaaacggt
gaactgaacgagttcgtctccaccgcaaaaggtgtgtttcaagctcttattgaaaaaaga
tttcctgttgcaaataataaaggaagatttgttgaagacgactttcctaaattgtctcaa
gtgggcaagaaaagaaaatctgttcgtgaccttcacaaaacaagagacaaaaaaattaaa
aaggatgaagtatttggacgtactttcttgagcgataacgacgatgatatcagttcagtt
gacgacgataatgataacgcgtctttaaataacgattccaagtcatgtgacagtaatgac
gatgaaaatggtgatgacgtcattgaaattgattccgaatcggattccgacgaagataat
tggttgaaaaaaattgaaaaacccaaaaagaagaaaaaaatgcgtaatggcgaacattct
tcacagactgccaacaatatggaagtgttacgagccgctggtcttcatgtcaattcactc
aactggagtaaaccatcacgtgattcttcatccacagctgtcaaggcggctcctattgcg
aaaaattctggttcttcaacaagttttgatgatgtttttgccaaactggaagcagctgaa
aagaagaacgataacatgaacttgagtcttgttgattacattaagacaacaagtctaacg
tcagaacattacaaaaatatcactcctgcagagcaatgtcaggtgatgaaaactgaanct
ttacataaactggactatatagcgagctatctgcccaataatacattggataagttgatg
aatgacttgggcggtccagataaagttgctgagatgacgggacgtaaaggacgtgtggtg
tcagggaaggatggttctgtacaatatgaacttagaaatgaaagagacgttcgcttggag
atgttaaatattgctgaaaaaacgcgttttatgaatggagagaagaatgttgccattatt
tctgaagctgcaagctctggtatctctttacaagcagatcgtcgtgctaagaaccaaaaa
cgtcgtgtacacataactctagagttaccttggagtgcagataaagctatacaacaattt
ggtcgaactcatcgttccaatcaagttaacgcaccagaatatctttttcttatatccaag
ttgtctggtgagcaaaggtttgcatctatcgtggcaaaacgcttggaaagcttgggtgcg
cttacacatggtgaccgacgggctacagaatcgcgggatctcagcaaatataactttgat
aataaatacggtcgaactgcccttgagcttgtacttaaatcagtagttggtcttgaatca
ccgatagtcaagcctccatctgattatcaaggggatttttttcaagatgttcgtgttggt
ttaattggtgttggtttagttggtgcgaacggtattttggataaagattcctttaatatt
tccaaatttttaaatcgccttcttggattgcaagtagctcttcaaaatggcttgtttcaa
tactttactaacactttggaggccgttattcaaagagcaaaacgaaacggtcgttatgac
gagggaattttagatttgggctcaaatggcgaagctgtacaccggttaagcactagaacg
ttcgaaaatattgacgcttctggatctacagagttacatactgtaagtgtggagcgtggt
ttgtcttgggaacaagctcaagtcaaattgcaagaaaacgaaatggcagacgaaggattt
tatttgtcaaagcaggtacgaaacaacaaaaggactgcaattcttgtaaaacaagtgtat
aattttggaaaaaaacgattttttcgtgtttatcgaccaaacactggaatgcaattaaaa
atggaaacactacccgaaatccagaaaaaacatgataaggttgcaatttggacggctgaa
cctgcttggatcgagcaatacgaatcatcagaaacacaatgctctcattcctattggaaa
ggaaactgtaaaagaaaggttttgggtttatcgtgtgttgttggacttcgtacgcgtacc
tatcatatcctgagtggctcagttttaagagtctgggacatagtggaggatgtcttgagt
acacagggaggtaacaattcccggatgcaaattattcgtgttcgaacgatggacggttta
cgtgttgttggttcatcaattcccactaattgcgtagaagctttgagcactcgactatct
tcatcgactgccaatgaataa
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