Xenia sp. Carnegie-2017 (soft corals): 124434636
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Entry
124434636 CDS
T08024
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xen03009
]
124434636
Enzymes [BR:
xen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124434636
Ribosome biogenesis [BR:
xen03009
]
Eukaryotic type
90S particles
Helicases
124434636
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Flavi_DEAD
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
124434636
NCBI-ProteinID:
XP_046840480
LinkDB
All DBs
Position
Unknown
AA seq
568 aa
AA seq
DB search
MGVCLPLMTSLIAHIVAYSQDEKDRPSNVEFDDGEGNVSDVLDFFGDKSSKLFMNEEKTF
DNLQKLKSNEKIEKPPKRNKKRKRKVVNSEMEFAESMSVKKVKKNEKNLLELHKEKVNAL
RNRNHISVKGADISDPIECFTELDLEYSCPQYILNNILESGYTKPTPIQMQAIPLILQQR
ELLACAPTGSGKTAAFILPILYHLKESMKCGFRCVILSPTRELAQQIYRECLHLSKGKAF
RIHILTKAKEQNFGPKSNKHFDILVTTPSRLVHLLQQTPCAIQLENVEWLIFDEADKLFE
EGKNGFRDQISTIYQSCCNTKVKRALFSATLSNGIEEWARTHLDNVVQVTVGVRNSATET
VEQELLFVGQECGKLIAIRDIIHKGFEPPMLLFVQSKERAKELFHELIYDGLNVDVIHSD
RTQSQRDNIIKCFRTGKIWVLICTELMGRGIDFKGVNLVVNYDFPTTSVAYIHRIGRTGR
AGRRGKAITIFTEDDVGNLRSIANVVKSSGGNVPDWMLKLKKQTRKASKKLSKQPVKRKS
IKTTTKYDLYQAKKKREMVKSSKRKASQ
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgtgtttaccgcttatgacgtcactgattgcgcatattgttgcctactcgcag
gatgagaaagatagaccttctaatgttgaatttgatgatggggaaggaaatgtgagtgat
gttcttgatttttttggcgataaaagctctaaactgtttatgaatgaagaaaaaactttc
gataacttacaaaaactgaaaagtaatgagaaaattgagaaacctccgaaaaggaataaa
aagcggaaaagaaaagttgtgaattcagaaatggaatttgcagagagtatgagtgtcaaa
aaggtgaagaaaaacgaaaaaaatttgttggaattgcataaagaaaaggtgaatgcttta
cgaaacagaaaccacatttctgtaaaaggtgctgatatttcagatccaattgaatgtttt
acagaactagatttagagtactcctgtcctcaatatattttaaataatattcttgaatct
ggctatacaaaacccactccaattcaaatgcaagccataccacttattcttcagcaacgt
gaactgttggcttgtgctccaactggttcaggaaaaactgcagcttttattttaccaatt
ctttatcatcttaaggaatcaatgaaatgtgggtttagatgtgtcattctttctccaaca
agagaactggctcagcaaatttatcgtgaatgtttgcatctttccaaaggaaaagcattt
agaattcatattttaactaaggcgaaagaacaaaactttggaccaaagtcaaacaaacat
tttgatattttggtgacaacaccaagtcgtctagtacaccttctccaacagactccatgt
gctatacagttagaaaatgttgaatggttgatctttgatgaagcagacaaattgtttgaa
gaaggcaaaaatggatttagagatcaaatttcaaccatatatcagtcttgttgtaatact
aaagtgaaaagagcattgtttagtgcaacattatccaatggcattgaggaatgggcaaga
acgcatttggataatgtagttcaagttactgttggtgttagaaactcagcaacagaaaca
gtagagcaagaattgttgtttgttggtcaagaatgtggaaaattaattgctattcgtgat
attatacataaagggtttgaaccaccaatgttgttatttgttcagtctaaagaacgagca
aaagaattgtttcatgaacttatttatgatggactcaatgtagatgtcattcattcagac
agaacacaaagccagcgtgacaatattataaaatgttttcgaactggcaagatttgggtt
ttaatttgcactgaactaatgggccgtggaattgatttcaaaggtgttaatttggttgta
aattatgactttccaacgacatctgtggcatatattcatagaattggtagaacaggtcgt
gctgggcggcgaggaaaagcaattacaatttttactgaagatgatgtaggaaatttaaga
agcattgcaaatgttgttaaatcttctggtggtaatgttcctgattggatgttaaagtta
aagaaacagacaagaaaagccagtaaaaaactatcgaagcaacctgtgaaaagaaagagt
ataaaaacgacaacgaaatatgatttatatcaagctaagaaaaaaagagaaatggtaaaa
agctcaaaacgaaaagctagtcaataa
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