Xenia sp. Carnegie-2017 (soft corals): 124434931
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Entry
124434931 CDS
T08024
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3-like
KO
K22611
spliceosome associated factor 3, U4/U6 recycling protein
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xen03041
]
124434931
03036 Chromosome and associated proteins [BR:
xen03036
]
124434931
Spliceosome [BR:
xen03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
124434931
Chromosome and associated proteins [BR:
xen03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
124434931
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_occluded
RRM_11
RRM_7
TPR_14
HAT_Syf1_CNRKL1_C
Lsm_interact
RRM_10
KorB_C
LSM_int_assoc
DUF8400
Motif
Other DBs
NCBI-GeneID:
124434931
NCBI-ProteinID:
XP_046840830
LinkDB
All DBs
Position
Unknown
AA seq
889 aa
AA seq
DB search
MNMADDSTTEKAVMSDDVSHAECDVQMKMREENDDEVTSSDDEMPEDSQVTELREFLENS
PFHYESHLKLIQALREIGDLDKTRQARETMSRMFPLTPEIWLEWIKDEMPLSCITEQKTY
IHDLFEKAVQDYQSVKLWTEYCQFVMDNMDGEAGIEEARMVFERAITAVGLHVTEGAAIW
DGYREFEMALCDSYQTIAEGSNGPQFQKKLSQQKEKVKTLFRREVSVPLIGMQAAYREYE
QWLGDEGIQENIMREYKRAETKLEKCLPFEETLASAESPKLTEYREYIAFEMKENDLARV
QCLYERAMLENCLNSEFWIEYTNYLDMKVSIIDVVLPVHERAVRNCPWVVTLWCSYIKAL
ERTSQSQDKVQEVFDRGMNAMISNADDSILLWRCFLECLRRRVKDWKQENAERVDLMKAF
DDATDYIKSNFGKDGDSQHFILRYKAYFEATKLDNISGAKKIWDFIMLHHNRESKFWVEY
IQLLRQVQDNIGCRKLFNRAIQTSNDEPEKLCELYLKFEKEEGSLSDLDVAVNKCSERLK
RVWAQKQKEYERSDATRQAEDEANAKKEKVKADKRTNKKAEEKLKIQKVKRKHEDIDDND
IKDEQPSAKRPFVSKDEKAPQLKHPTLATKEDKVHGSCKDHLKVFVSNLLFSVDEEQLKS
VFSPLGEIEEIRLIKNLQGKSKGYAYVEFKHQSSVSAALATDRQQLCGRPMFVSQCVDKT
QTPTTFRFSTTLDKTTVFVTNLPFEMNSTEIEDVFSEHGKVKQVRLVTNRAGKSKGYAYV
EFEDESGAAAAVLKQDQKTVKNRVINVALSNPPKRERQETDVKHIRPDTGSRPGRARTQV
QFVPRALKKTQVADSSEAHAILDSSVESKQSDKVKSGLSNDDFRKMLQK
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgaatatggcggacgattctacaacagaaaaggctgtcatgtcagacgatgtttctcat
gcagaatgtgatgtgcaaatgaaaatgagagaagagaatgatgatgaagttacttctagt
gatgatgaaatgccagaagatagtcaagtaactgaactacgagagttccttgaaaactca
cctttccattatgagagtcatcttaaattgattcaagcattgcgcgagattggtgacctg
gacaaaacaaggcaagccagagaaacaatgagtcgtatgttccctttaaccccagaaatt
tggttggaatggattaaagatgagatgccactctcttgtatcacagaacagaaaacttat
atccatgatctgtttgagaaagctgttcaagattatcaatctgtcaaactgtggacagaa
tattgtcagtttgttatggataacatggatggtgaggcagggatagaagaggctcgaatg
gtatttgagagagcaataactgctgttggtcttcatgtgactgagggtgcagctatttgg
gatggttatagggaatttgaaatggccttgtgcgactcatatcaaacaattgctgaagga
tccaatggtccacaattccagaagaaacttagccaacagaaagaaaaagtgaaaactctt
ttcagacgagaagtctctgtcccattaattggaatgcaagctgcttatcgagaatatgaa
caatggttaggagatgaaggaatacaggaaaatatcatgcgagaatacaaacgagccgaa
accaaacttgaaaaatgtttacctttcgaagagacattggcatcagcagagtctccaaag
cttactgaataccgcgagtatatagcattcgagatgaaagagaacgacttagcgagggtt
caatgtctttacgagagagctatgttggagaactgtttgaattcagaattttggattgaa
tacacgaactatttggatatgaaagtcagtattatcgatgttgtcttacctgttcatgaa
cgcgctgttcgtaactgtccgtgggttgtaacgttgtggtgtagttacatcaaggccttg
gaacgaacttctcaaagtcaagacaaagtacaagaggtttttgaccgcggaatgaatgca
atgatttcaaatgcagatgattcaatcttgctttggcgctgttttttggaatgtctgaga
cggcgtgtaaaagactggaaacaagaaaacgcagaaagggtggacttgatgaaagcattt
gatgacgctacagattatatcaagtcaaacttcgggaaagacggagatagtcagcatttc
attttaagatataaggcctactttgaggcaacgaagctggacaatatctcaggtgccaaa
aaaatatgggatttcattatgttacatcataatcgtgagtcaaagttttgggttgaatac
attcagttgttaagacaagtacaggataacatcggttgtagaaagctgtttaatcgtgcg
atacaaacatcaaatgatgagcctgaaaaactttgtgaactttatcttaagtttgaaaaa
gaagaaggatctttaagtgatcttgatgtcgctgttaacaagtgttctgaaagactgaaa
cgagtttgggctcaaaaacaaaaggaatatgagaggagtgatgctacccgtcaagcggag
gatgaagcgaatgccaagaaggagaaagtaaaagctgataaacgcaccaataaaaaagca
gaagagaaactaaaaattcaaaaagtcaaacgaaaacatgaagatattgacgataacgat
attaaagatgaacagccaagcgcaaaacgtcctttcgtatcgaaagacgaaaaagcacca
caattgaaacatccaacgctagcgactaaggaagataaagttcatggcagctgcaaagac
catttgaaagtatttgttagcaatttactcttttctgtcgacgaggagcaattaaaaagt
gtattttcgccgctgggtgaaatagaggaaattcgtttgattaaaaatctacaaggaaaa
tctaaaggatacgcatacgtcgaatttaaacatcagagctctgtttcagccgctttggct
acagacagacaacagttgtgtggacgaccgatgtttgtttcgcagtgtgtggataaaact
caaactccgaccactttcaggttttccacaaccctcgacaagaccaccgtctttgtcacc
aacctgccatttgaaatgaatagtacagaaattgaagatgtttttagcgagcatggcaaa
gtaaagcaggttcgtttggtcacaaatagggcaggaaagtcgaaaggatacgcttatgta
gaatttgaagacgagtcgggtgctgcagcggcggttttgaagcaggaccagaagactgtg
aagaatcgcgttattaatgtagctttatcaaatccaccaaaacgagaacgccaagaaact
gacgtaaaacacattcgtcctgacacaggaagtcgtcccggtcgtgcgcgcacgcaggtt
caatttgtacccagggctttgaaaaaaacacaggtcgcggacagttcggaagcacacgcc
atcttggacagctcagttgaatcgaagcagtcggataaagtgaagtctggactgagcaat
gatgattttcgaaagatgttgcagaaatag
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