Xenia sp. Carnegie-2017 (soft corals): 124434963
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Entry
124434963 CDS
T08024
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-like isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xen04121
]
124434963
Enzymes [BR:
xen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124434963
Ubiquitin system [BR:
xen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
124434963
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_2
PDZ_6
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-RING_2
zf-C3HC4_3
U-box
DUF1515
zf-RING_16
zf-Nse
DUF2959
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
124434963
NCBI-ProteinID:
XP_046840874
LinkDB
All DBs
Position
Unknown
AA seq
979 aa
AA seq
DB search
MGYRCEIFVDPIPDSLLCDLCSNVYRCPVITSCDHVYCEECLRSWLTNKVHCPKGCREIT
FEQNVTHLLPLQILVGQLNTRCVNYAEGCDIVTQLSDMLAHLEVCDYAKKDAKIIERAIY
TNEQASTIGSLNQVFVCAKGCGLPLLFHDASEHDCVKSLQAQVQSLQAKLSRSEHEREKV
SARLVKREESMQERFTQLEQDLRLYQEQTLNYELKTRDQNSQINYLKRQLDSREADKTAD
ETEMKVVLERAGGILGLNIRGGTEEHDTHRGIYVSKIVENSPASEKLQLYDRILKINEID
LSNASHEEAVRAFKNAGEKLEITVQRFNNSKPGVMFSTGYVSVGVQTEELKTRFSCCYCR
SNVSSLESSPQATISRIHQKEDSGVDENGEHQSDLDPSELRMNTGYTSDDVKPQDEILNR
LLLNSSIAALGKRNSRILPDEAVQTGCEGEDLAEIQSLSNGYYSGNVSQASLENVKTRGN
LEKEGLETNQEIPHDEECCSAVNETDQLYFDSELEYEYEEITIRTCGNKSLGMKLYSGNG
EDVSSVFVDEVDSRSIIGKDGRLIEGDQILKINDFAVTCLDDAVGLLNRRHREIKFLVAR
PVAELQATLLGAESDHDPEAFHHQSRLHLEAFPIGVIHEEDEEEAEALIGKKSREDEKDS
GFARTDDSTKNDSGNDGGDDRPLRDEKEQHKAQMDALGKQIIHFTACASNARELGLRDSP
RERSSDEHSQRSGEREKHSKHSSRKPASKTSSDENSAQEHKSKTHSKSHRSKNSENSPVS
RSKERSECKDRSENRKKKDKANGDSSRSKRDTCESSRSKRDNRESKGNGNHSSSDTKVEW
RVRRNKDGSRIFISKKLKPAKQRLLRERAQKLAEERRGLTTDDETQSVYLGRYWSREDRR
RQLDKVREARRTKKIEVEAERKASQQGTIKRNDFEIIQLTHKKMSCNEQTFDDFMTVEEV
LRQRNRLGMTNGPVFVTTV
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgggctataggtgtgagatatttgtggatcctattccagatagtctgctttgtgattta
tgtagtaatgtatatagatgtcccgttataacctcctgtgatcatgtatattgcgaggag
tgtctgagatcgtggctgacgaacaaagttcactgtcctaaagggtgtagagaaatcacg
ttcgaacagaatgtaacacatttactacctttacagatattggtcggccagttaaatact
cgttgtgtgaattacgccgaaggttgtgacattgtgacgcagttgtccgacatgttggct
catcttgaggtttgtgattacgcaaagaaagacgccaagattatagaacgcgcaatatac
acaaatgaacaagcatcgaccattgggtcattaaatcaggtattcgtgtgtgctaaaggt
tgcggtttgcctctactatttcacgatgcgagcgaacatgattgtgtaaagtctctacaa
gcccaagtacaatctttacaagcaaaactctcgcgctccgaacacgaacgtgaaaaagtg
tctgcgcgtttagtaaaacgcgaagaatcaatgcaggaacgatttacgcaattggaacag
gatttgagattgtaccaagagcaaacgttgaattatgaattaaaaacaagagatcaaaat
tcccagataaactatttaaagagacagttggatagtcgcgaagcagacaagacagcagat
gaaacggagatgaaagttgttcttgaacgcgctggtggtatcctgggtttgaatattcgt
ggtggaactgaggagcacgacacacatcggggaatttacgtatccaaaatagtcgaaaac
agccctgcatctgaaaaacttcaactctatgacagaattttaaaaattaatgaaatcgac
ttgtcgaacgcatcccacgaggaagccgtgcgagcttttaaaaacgctggtgagaaatta
gagattacagttcaacgatttaacaactctaaacccggcgttatgttttctactggttat
gtttccgttggtgttcaaacagaggaactgaaaacaaggttttcatgttgttactgtcgt
agcaatgtttcgtcccttgaatcctcgccacaagctacaataagtagaatacatcagaaa
gaagactctggtgttgacgagaacggtgaacatcagtcggatcttgatcccagcgaactt
cgcatgaatacaggatacacgtcggatgatgtgaaaccacaagatgaaatattgaacagg
ttgttgttgaattcatctattgcagcgttggggaaacgaaacagcagaattctacctgat
gaagctgttcaaacaggctgcgagggagaggatttggccgaaatacagagtttaagtaat
ggttactattcgggaaatgttagtcaagctagcttggaaaacgtcaaaactcgagggaat
ttggagaaagaaggactggagacgaaccaagaaataccacatgacgaagaatgttgtagt
gcggtcaatgaaacagatcaattgtactttgattctgagttggagtatgaatacgaagaa
attactatcagaacgtgtggaaacaaatcacttggaatgaaactgtactctggtaatggt
gaggatgtcagttcggtatttgttgacgaggtggattctcggtctattattggtaaagac
ggtcgcttgattgaaggagatcaaatattgaagattaacgattttgctgtaacgtgcttg
gatgatgctgttggtttgctgaatcgaagacacagagaaataaagtttcttgttgcaagg
cctgttgcagagttacaggcaactctcctcggagccgagagtgatcacgaccccgaagct
tttcatcatcaatctcgattgcatctcgaagcctttccgattggtgtcatacacgaagaa
gatgaagaggaagctgaagcattgattggcaaaaaatctcgagaggatgagaaagatagt
ggatttgcacgcaccgatgatagcacgaaaaatgattctggaaatgatggaggagatgat
cgacctttgagggatgaaaaggagcaacacaaagcacagatggatgcgttaggaaagcag
attattcattttaccgcgtgtgctagtaacgcacgagagttgggcttgcgggatagtcca
cgcgagaggagctccgacgaacactcacaacgttctggtgaacgagagaaacattcaaag
catagctcgcgaaaaccagcaagtaaaacatcctcggacgaaaattctgctcaagaacat
aaatcaaaaactcacagcaaatcgcatcgatctaaaaatagtgaaaacagtccagtatcg
cgaagtaaagagagatcagagtgtaaggatagaagtgaaaatcgaaaaaagaaagacaaa
gcaaacggagattctagcagatctaagagggatacttgtgaatccagtagatcaaagagg
gataatcgtgagtcgaaaggaaatggtaatcattcgtcgagtgacacaaaagttgaatgg
cgagtgagaagaaacaaagatggaagtcgaattttcataagtaagaaactgaaacccgcc
aaacagagattgttacgcgagcgtgcgcagaaattagccgaagaaagacgaggattgacg
acagatgatgaaactcagtctgtgtatcttggaagatattggagtcgagaggatcgtcga
agacagcttgacaaagttcgcgaagctagaagaacgaaaaaaatagaagttgaagctgaa
aggaaagcatcgcaacaagggacaattaaaagaaatgatttcgaaataattcaacttacg
cataaaaaaatgtcttgtaacgaacaaacatttgatgattttatgacagttgaagaggtt
ttgagacaaaggaacaggttgggtatgactaatggtccagtgtttgtgaccacggtgtaa
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