Xenia sp. Carnegie-2017 (soft corals): 124435230
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Entry
124435230 CDS
T08024
Name
(RefSeq) Fanconi anemia group J protein homolog
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03440
Homologous recombination
xen03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124435230
03460 Fanconi anemia pathway
124435230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xen03400
]
124435230
Enzymes [BR:
xen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
124435230
DNA repair and recombination proteins [BR:
xen03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
124435230
FA (Fanconi anemia) pathway
Downstream FA components
124435230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
DTP-pb9_B-dom
HBB
Motif
Other DBs
NCBI-GeneID:
124435230
NCBI-ProteinID:
XP_046841127
LinkDB
All DBs
Position
Unknown
AA seq
1608 aa
AA seq
DB search
MADATNFKEFTITGVKVKFPFKPYPSQMSMMSMIIKCIEKRQNSLLESPTGSGKSLALLC
SSLAWQQNEKERVQKKERELEQSFRNLEKLEKMNKNENEIKTEPQIDVKYETCEQKPDAK
FLINSAIKTEIKAEFNEAGFQLTIKAERDTEAKPSVKKEASTGNIEKLNERKKKKNSHNG
CDSEDEMDFQVPRKRFRTPQEQMPRAKKSRHNVNDGLLDSLPDAQCLLLMTVIGLKMMTW
RCEENVPKIYFGTRTHKQITQIIRELNRTEYRNKNMCILASREHTCIHPHVSQAKNKTEE
CRKSIENRECVTYTCQIKAYKMFMVCRHVPGLCVSGKILQILLKSSIREKSTGSRRLWHK
KAWTISELVEIGEMVRGCPYYMTREIKKNADIIFCPYNYLIDPIIRNQMDIDLTGEVLIL
DEAHNIEDSCRDAASWSVNTHQLDEALSDIDFMVSKNIHREQHEIFHYMCATVRKWIVEN
SNVMSGSSKKNDFNKSFEKRYGKETRHFGKVMKPVESSVKIDRRERTVMNAATSSLLEGL
FTVSSFITEKNFKFLHDYRMGITEENVMVSTATIMPNGYIIRGDPKREELYVLNFWCLSP
AVVFSEINEQCRSVILTSGTLSPMATFSSELGCQFPIQLEANHVISRSQVMVGSLSTGPS
GTTLNGSYRFSEKLQFQDELGETILRVCEAVPHGVLCFLSSYGMLDKLTKRWKCTNLWTR
LKRVKNTFCEPRCGDKSDFNGVISDYYECIRVSGDSDDSDCEYAPSGAIFFAVCRGKVSE
GLDFADNNARAVITVGIPFPSLKDIQVELKRKYNDKNHTLKGLLNGRDWYEIQAYRALNQ
ALGRCIRHRNDWGVILLIDERFGMSSKYKNGLSKWLRNKLSHHNSFGDFLSSVKEFTVTR
VNNSCPQNSVLQTPSRTSDVSSQDSSLTVCATSQLTPSRNVEKNINANVSSSISLSDPTL
NSPQNTVHNSVFQGMHTVNNLQPVNDLQQPNNMQQVNNLQQVNNQPQVGKLKQISNMQKV
NNLPQVGKVQQISNMQQVNNLPQVGKLQQISNMQQVNNLPQVGKLQQISNMQQVNNLPQV
GKLQQISNMQQVNNLPQVGKLQQISNMQHVSHLQRRGNPIVFNNAANVTNPLRSANHQQL
GNLMQPRFPCGNGPVLVRFVNAKGEPVRYALLPGQRPPLMTSPNTKNHMAMTSNELGTSE
STGVMSSGIAMDVQVSNAPITMVKIKQEPQSPPDEVKGMCLEDQTSLRNEGSGDNPQKTV
IGQHELCSDGIITDMRTKAGSTSSENVNANKSTSHSTQGSFFSQRPNASNNAYGSTQSIG
LPRKALFSSENLKSSVVKEPDDCKESPSKKSRTNIPPPLDLNKCLGISQSCETVSNDDDT
SDSPILFYTPPSMNADETCGDSEECLETENYNTGTPKKGNKTNKNFAYDERNIDNCGLKT
ACTTVTCTRCDTALYSAKTGDNASITTEEISTDDILGVIIHRLFFIAWKKKKKPPTVKVF
KAVRSDSTVLDKCCPAFSDMNESHTEADARVNSIYREEQSCCYIPLLCKSCEQGMQSCKR
KSRLHVVAVSSVPCGEIRDCPQSIWFNPENVKLVEEYGNMIRKPLRPK
NT seq
4827 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgcgacaaattttaaagaattcaccattactggtgtaaaagtgaagtttccc
ttcaaaccctatccaagtcagatgtcaatgatgtcaatgatcataaaatgtatcgaaaaa
cgacaaaattctctacttgagagtcccacaggctcgggaaagagcctggcattgctttgt
tccagtttagcttggcaacaaaatgagaaagagcgtgttcagaaaaaagaaagggaactg
gagcaatcttttcgcaatcttgagaaattagagaagatgaacaaaaatgaaaatgaaata
aagactgaaccccagattgatgtgaaatatgaaacatgcgagcagaaacctgatgcaaag
ttcctcattaactctgctataaagactgaaattaaagcagaatttaacgaggcgggtttt
caacttaccataaaagctgaaagggatacagaagctaaaccatcagtaaaaaaggaagcg
agtacaggaaatatagagaaattgaatgagaggaagaaaaaaaagaatagccataatgga
tgtgatagtgaagatgaaatggattttcaagtaccacgaaagcgatttcggactcctcaa
gaacagatgcctagggccaagaaatcccgtcataatgttaatgatggtttactagattct
ttgccagatgcacaatgtcttttgctgatgacagtcattggtttgaaaatgatgacttgg
agatgtgaagagaatgtcccgaaaatctactttggcacacgaacacataaacagatcaca
caaattatacgggaactcaatcggactgagtatagaaacaaaaacatgtgtatcttagca
agtcgagagcacacttgtattcatccgcatgtttcacaagcgaaaaacaaaacagaagaa
tgtagaaagtccattgaaaatcgtgagtgtgtaacatacacctgtcagattaaagcctac
aagatgtttatggtttgtcgtcacgttcctgggctatgtgtttcagggaaaatcttgcaa
attttactcaagagctcaatacgtgaaaaatcaacaggatctagaagattatggcataaa
aaagcttggacaatttcagaacttgtggagattggggaaatggttaggggatgtccgtac
tacatgacacgtgaaatcaagaagaatgctgatattattttttgtccttataattatctc
atcgatccgattatcagaaatcagatggacatagatcttactggtgaagtgttaatactt
gatgaagctcataatatagaagattcgtgtcgtgatgctgcaagctggtcggtcaatacc
caccaacttgacgaagcactatctgatattgattttatggtgagtaagaacatccaccga
gaacaacatgaaatatttcattatatgtgtgcgacagtacggaagtggatcgtggaaaac
tcgaacgttatgtcgggttcgtcaaaaaagaacgattttaataaaagtttcgagaaaaga
tatgggaaggaaacgaggcattttggcaaggtgatgaagcccgtcgaatcatcagtaaaa
atagacaggagggagaggacggtaatgaatgctgccacgagtagtttacttgaaggattg
ttcacggtttcatcattcataactgaaaagaatttcaagtttcttcatgattacaggatg
ggtatcacagaggaaaatgttatggtatctacggctaccataatgcccaacggatatatt
ataagaggagatcctaaaagagaagagctctatgttcttaatttttggtgtcttagtcct
gctgtggtgttttctgagatcaatgaacaatgtcggagtgttattctcacgtcaggaact
ctctcaccaatggcgacattttcgtcagaacttggttgtcagttcccaatacaactggaa
gctaatcacgtcataagccgttcacaggtaatggttggcagtctttctacaggtccatca
ggaacaactctcaatggttcttatcgtttttccgagaaactacagtttcaagacgaactg
ggggaaacaattctcagagtctgtgaggctgttccacatggcgttctttgctttctatct
tcgtacggcatgttggataaactcactaaacgatggaagtgtaccaatctttggacaaga
ttgaaaagagtgaagaacactttctgcgagccaagatgtggagataaatcagattttaac
ggtgtaatcagcgactattacgaatgcataagagtttctggagactctgatgattcagac
tgcgagtatgcgccttctggtgctattttctttgctgtttgtcgtggaaaagtcagtgaa
ggattggattttgcggacaacaatgcgcgtgcagttattacagtgggaattccgtttccc
agtttgaaagacattcaagtggaactgaaaagaaagtacaacgataagaatcataccttg
aaaggactcttgaatggtcgtgattggtacgaaattcaagcttatagagcgcttaatcag
gcattaggacgttgtatcaggcacagaaatgactggggtgtgattttgttaattgatgaa
agatttggtatgtcttccaagtacaaaaatggattgtctaaatggttacgtaacaaactc
tctcatcacaactcgttcggtgattttttatcatcagtaaaggagttcactgtgacacgc
gtgaataattcatgtcctcagaattctgtacttcaaacaccgtctcgtacctctgatgtc
tcaagtcaggattcttcgctaacagtctgtgcaacctcccagttaactccatcgagaaac
gtcgagaaaaacatcaatgcgaatgtgtcatcttccatttccttgtctgatcccacgtta
aatagcccgcaaaacactgtgcataattcagtgtttcaaggcatgcatacagtgaacaac
ctgcaacctgtcaatgatctgcaacaacccaataacatgcaacaagtcaataacctgcag
caggtcaataaccaaccgcaagttggaaaactgaaacaaatcagcaacatgcagaaggtc
aataacctaccacaagttggaaaagtgcaacaaatcagcaacatgcagcaggtcaataac
ctaccacaagttggaaaactgcaacaaatcagcaacatgcagcaggtcaataacctacca
caagttggaaaactgcaacaaatcagcaacatgcagcaggtcaataacctaccacaagtt
ggaaaactgcaacaaatcagcaacatgcagcaggtcaataacctaccgcaagttggaaaa
ctgcaacaaatcagcaacatgcagcatgtcagccatttgcaacgcaggggcaatccgata
gttttcaataacgcagcaaatgttaccaatcctctgcgaagtgcaaaccatcaacaactg
ggtaaccttatgcagccaaggtttccatgtggtaacggaccagtgttagttagatttgtc
aatgcaaaaggggaacccgttcgatatgcacttttacctggacagcgtcctccgttgatg
acctcgccaaacaccaaaaatcatatggcaatgactagtaatgaattagggacctctgag
agcacaggagtaatgagttctgggattgccatggacgttcaagtatcaaatgctccgata
actatggtaaaaatcaaacaagaacctcaaagtccccctgatgaagtgaagggtatgtgt
ttggaggatcaaacatcgttgaggaatgaaggcagcggcgataatcctcagaaaacagtt
attggtcaacatgaattgtgttcagatggtatcattactgacatgcgcactaaggccggc
tcaacgtcatcagagaacgtgaatgctaacaagagtacatcacacagcacacagggatct
tttttctctcaaagacctaatgcatctaacaatgcatacggctcgactcagtcgatcgga
ttgccaagaaaagcactgttttcttcagagaatttgaaatccagtgtagtaaaagaacct
gacgattgtaaggaatcgccatcaaagaagtctcgaactaacattcctccacctttagat
ctaaataaatgtttaggaatatcacaatcctgtgagactgtgtcgaatgatgatgacacc
tctgactcacctatcctcttttataccccaccatcaatgaacgctgatgaaacttgtggg
gatagtgaggaatgtttagaaacagagaattataatacgggaacaccgaaaaaagggaac
aaaacaaataagaatttcgcgtatgacgaaaggaatatagataattgtggattgaagact
gcgtgtacgacagtcacgtgcactcgttgtgatacagctttgtattcagctaaaacagga
gataatgcttcaattacaactgaagagatctcaaccgatgacattctcggagttattata
cacagattatttttcattgcgtggaagaagaagaagaaaccaccaacagtaaaagttttt
aaagcggttcgcagtgattcaacagttctagataaatgctgtccggctttttcagacatg
aatgaatcacataccgaagcagacgcaagggtgaacagtatttaccgcgaggaacagtcg
tgttgttacattccacttttatgcaaatcgtgtgaacagggcatgcaatcttgtaaacgc
aagtctagacttcatgttgttgctgtatccagtgttccttgtggggagattagggactgt
ccacaatcgatttggtttaatcccgaaaatgtaaagctcgtcgaagaatacggaaatatg
ataaggaaaccactacgacctaagtga
DBGET
integrated database retrieval system
