Xenia sp. Carnegie-2017 (soft corals): 124435297
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Entry
124435297 CDS
T08024
Name
(RefSeq) LOW QUALITY PROTEIN: helicase domino-like
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124435297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xen03036
]
124435297
Chromosome and associated proteins [BR:
xen03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
124435297
SWR1 complex
124435297
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
Motif
Other DBs
NCBI-GeneID:
124435297
NCBI-ProteinID:
XP_046841189
LinkDB
All DBs
Position
Unknown
AA seq
2860 aa
AA seq
DB search
MAHQSGMGRGVTSPGATIYSLGDQHIQPHMQSPLPPTSPIFTGPVSMAGPVTPSCTTPPL
GSTNIPRFPLPSSSHSIYPTDQHLVSPVRNVMDPGMPLHYQYPPYYSRRPRYSDESPLSS
SPGSTHHVPGYPTGVQTSSNISSFPNKNIPKRTAPVKSGIRRNPGLQIDFSPQKQGEKCH
EEGYPPLNTQYGQKMLRSPGYTNISPSIPANVSEEIKQLRVKVVEYFYQNIELIRKRYQD
NLKELFFLQHGGNLIDFPVWCRRPNPHWFNYQETHKLEDDIDFYVTSNPMENMQVQNIGQ
DYVATQQNFYQSSFGNMQPEKLHGNAGAVIMGTSQQSGSLRLPYIHPRNSIEGHIDLASS
KIYMSKDSTFGTLLPTQHAKHGLNCEPENLAAARAFAINQSKEDIMVEAKREADILKRVA
ELRKEGLWSTKRLPKVQESSRNKTHWDYVLEEMAWLSTDFAQERRWKKNVAKKLSKAVLR
YYQEIKTKEIKAEKETTVKLQKIASSIGKEVRQFWLNIEKVVQYKLQSRIEEKRKKALDV
HLNFIVGQTEKYSSWLAESLKDTKPSSSVASSVTSSTADSSPVSSRQDDDTDDESEISLH
EESEDDEGTIDVEESYDNKELMSAEDEISALQRESEIPIDDLLESLPLEMFTEHSAQSNV
IKDDDDGDVVDETKICAIPEKLPSTSTDGKEEEEMCIDHETNDGDHEFVLRDTMVDVDDE
GTLEEEEKLEEKEDHTAEISLLEQEGELSIEELLQKYNVDDEYDADEVLRSDDDEESIDE
ESSEEEDGTEALLVSHSTQEATPKPTTVSDSPNQELNDAAATAESLQPTGYTLETTKVKT
PIPFLLRGGTLREYQHIGLDWLVTMYEKCLNGILADEMGLGKTIMTIAVLAHLACERGSW
GPHLIVVPTSVMLNWEMEFKKWCPGFKILTYYGNQKERKMKRTGWTKPNAFHVCITSYKL
VVQDHQSFRRKKWNYLILDEAQNIKNFKSQRWQYLLNFNTERRLLLTGTPLQNNLMELWS
LMHFLMPHLFESHKDFKDWFSNPLSGMIEGSSEYNENLIKRLHKVLRPFLLRRLKSEVEK
QMPQKYEHVIRCRLSKRQRVLYDDFMSRTRTKETLESGHLLSVINILMQLRKVCNHPDLF
EPRPTITSLKMTGIVYTTASLVLTVMEHDPLQSINLFTMNLLLTQLEFSLSAFASHRVRL
LQTPSALITEIDNYTPSQTPILLPVKTKFSQPPNGEHFKDVKSNSYEQSVWSEMNMYPDA
LYPGYGGKTYTLPSEQDYYNALEAANNITGSYSMIGDRHEDTPRSDIKCEGSLPYGSDEM
KISKILHTNESRVVNGHVGTLESAAVILDQKSALTEKASQIESSEDVNFCRLSPFVMPRL
EEKRFVARQQKLRXFSTLNTRRCAAQPIYGKDLVESVTILRSPLELTWYRTSIHKPAICE
TLQTCTKSSQERVDEMQEIIKRFVFAVPAVRTQPIQMHACHPPPSHVTMQQNLEEGLIHE
VSHKLNILHPIVRGQLLQFPEVRLIQYDCGKLQTLDVLLRRLRAEKHRALIFTQMTKMLN
VLERFLNYHGYLYLRLDGTTRVEQRQVLMERFNNDRKIFCFILSTRSGGVGVNLTGADTV
IFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLISEKTIEENILKKAHQKRLLGEIAIEG
GNFNTTVLRETTVRDLFSINENDTDLQEMGTAKENSLTQQTSNDQVSKKNPKSQNAFEEA
LMKAEDEQDVRAASLVKAEQDAELAEFNENIPLDDDTALGQCLSKVEEELRELESQLSGV
ERYAVKFVEATQIFATNEELEVDEKKLELSKKDWELRHIQSLKEEEEKHSNTGNCGEQLE
VTYTTEESKQVKKSKNKSNKSEKTYTGKKPSANSSTIFSKPTTLKGQAKLPSASTSSDLA
EMNVEGGPASSFRSVRSTSKRSTRQNARLSRWIEFVDEVTGEEMPLWRPLTPPSEGKDDI
YVDHSQNYMYESKPLPEVLLPRITRTRRYLGDYKKHGRRSAFAFKHPYKEAVRRGLRKPH
SIFDRRALEAFFKIVAMLSNAKKAKMKMTKQPSQTSQQAQQQAQQQHSVRQQGDLQMIDT
GPEWFVHEDWALLQAVHYLQEMPIDLTVVNLGHTPNWLLVSDIVNTSSRTYRTARQCRDR
YVNVVMPREDGKAPLIEEREKKMKTKLKAPYAPPEYSAFVGNQPLPKPKDGHGTRLHALH
AHDNGRSSTIHHSSLFELVKKTSVKRKPNVKHSINTEPYQKPGNGQGNSVTGVNVEDVYL
DPAKIAAMKVERIQREKAEAVRQQQQQQQQQQQQQQQQQHTSKEHQQQLQTQPVVHALSQ
LPTSSIATKITVTAQQPVQLASAGQQQAQVMPTYQNQRLANAQSQILTSTSQKITTARMA
ATLSSKQVANLQGVASIPGTLVKTAAGSNIVVKAPGNVVGPLTMSKRLATQTGNPTAPTL
TTMKTGVSSENRPLANRDSAVQFLASAANGNIRLSTTTLSPSNTLVVSQTQTGQRLQDPL
HAGKFMAPKTFMQTGTKQLTQQQFNLLQKRLEQHQQRCQQQAVVQPSLPIKQVVQQPGSI
RKIAPPTTQKLLSVGAKVEQQRLPQTMTITRPMQQTVQQPATQVQQATQQQLQQLVQQQH
LKQLQVQQKQQQDKTTPIHLVTTQQQHLPVTSQQIKRVQLPTAQQVTTGLAQTGLVTTAG
MGGAPTKHVVKLIPGQHTYHHASLVKQRLQQQAKQVAHSRQQQPVQTGLSQSSTESNSTS
ASSVTNVQTLLQTSLTTHSSPQIQQQSMDKPLQPKLPLNKPITASIAGQAITSLQGVVST
MTVSSTVVSTTTSSTQGIQSINTNNQHQSPYAMRSRSQSK
NT seq
8583 nt
NT seq
+upstream
nt +downstream
nt
atggcacatcagtcaggtatgggacgtggtgtcacctcgccaggtgcaaccatctatagt
ctgggtgatcaacacattcaaccacacatgcagtcacctcttcctccaaccagcccaatc
ttcacaggtccagtttcaatggctggaccagtcactccttcttgtacaacaccaccattg
ggctctactaacatccctcgttttcctttgccatcttcttctcattccatttatcccaca
gatcaacaccttgtgtctcctgtgagaaatgtgatggaccctggtatgccattacactac
caatatccaccatattacagcagacgacccagatattctgatgagtccccattgtcctca
tcacctggaagtacacatcatgtccctggctaccctacaggtgtacaaacatcatcaaac
atttcatcttttccaaataaaaatatcccaaaacgaacagcacctgtcaaaagtggcata
agaagaaatccaggccttcaaattgacttctctcctcaaaagcaaggggaaaagtgtcat
gaggagggttatcctcccctcaacacccaatatggacaaaaaatgctaaggtccccaggt
tataccaatatatctccttccatccctgcaaatgtaagtgaagaaataaagcaattacga
gtaaaagttgttgaatacttttatcaaaatattgagttaattcgaaagagataccaagac
aatttgaaggagctgtttttcttgcaacatggaggaaacctgatagattttcctgtatgg
tgtcgaaggccaaatccacattggtttaattatcaagaaacacataaacttgaagatgat
attgacttctatgttacttcaaacccaatggaaaacatgcaagttcaaaacatagggcaa
gattacgtagcaacccaacaaaatttctaccagagtagttttggaaacatgcagccagaa
aagctgcatggaaatgctggggctgttatcatgggtacttcacaacaatctggtagcctt
cgtctgccatacatccaccctagaaattctattgagggccatattgatcttgctagctca
aagatctatatgtcaaaggattcaacttttggtacactgttaccaacacaacatgctaag
catggtttaaattgtgagccagaaaatttagctgctgcccgagcttttgctatcaatcag
tcaaaggaagatattatggttgaagctaaacgtgaagcagatatccttaaaagggttgca
gaattaagaaaggaaggtctttggtcaaccaagaggttgccaaaggtgcaagaatcaagt
cgaaataagacacattgggattatgtcttagaagaaatggcctggttatctacagatttt
gctcaagagagacggtggaagaaaaatgttgctaagaagcttagcaaggctgtcctcaga
tattatcaagaaatcaagacgaaagagataaaagctgaaaaagaaaccactgtgaaactt
cagaagatagccagcagtataggaaaggaagttagacagttttggttaaatattgagaag
gttgtccaatacaaacttcaaagtagaattgaagagaagcgaaagaaggcacttgatgtc
catttaaacttcattgttggtcaaactgagaaatattcctcctggcttgctgagagtttg
aaagatactaaaccatccagtagtgttgctagttcagtaacatcatcaactgctgattca
tcaccagtctcctcacgacaagatgatgatacagatgatgagagtgaaattagtcttcat
gaagaaagtgaggacgatgaagggactatagatgttgaagaatcttatgacaacaaggag
cttatgagtgcagaagacgaaatttccgcattgcaacgtgaaagtgagattccaatagat
gatcttttagaaagtttaccgttggagatgtttacagaacattcagcacaaagtaatgtg
ataaaagatgatgatgatggtgatgttgtagatgaaacaaaaatctgtgctattcccgag
aaattgccatctacgtcgactgacggaaaggaagaggaagagatgtgtatagaccatgaa
acaaacgatggtgatcatgaatttgtcctgagggataccatggttgatgtggatgatgag
ggaacattggaggaagaggaaaaacttgaggaaaaggaggatcacactgctgagatatca
ttattggaacaagaaggtgaattatcaattgaggaacttctacaaaagtacaatgttgac
gatgagtatgatgctgatgaagtgttaagaagtgacgatgatgaggagagtattgatgaa
gagtccagtgaagaagaagacggtacagaagctcttctcgtgagtcactcaactcaagag
gcgactccgaaaccaactactgtttctgatagtccaaatcaagaactgaatgatgcagca
gcaactgctgaaagtttacagccaactggttacacgttggagacaacaaaggtgaaaaca
cctataccattcttgcttcgtggtggtaccttacgagagtaccaacatattggtcttgat
tggttagtcaccatgtatgagaaatgtcttaatggtattcttgctgatgagatgggtctt
ggaaagacgatcatgacaatcgctgttctcgctcacctggcatgtgaacgtgggagttgg
ggcccacatcttattgttgtacccacaagtgttatgttgaactgggaaatggagttcaag
aaatggtgtcctggtttcaaaattctcacttactacggtaaccagaaggaacgaaaaatg
aagaggacgggttggacaaaaccaaatgcatttcatgtttgtattacatcgtacaaactt
gtcgtacaagatcatcagtcatttcgacgcaagaaatggaattaccttatcttggacgaa
gcgcaaaatatcaaaaatttcaaatcacaacgctggcaatatttgctcaattttaatacg
gaacgtcgacttttactcactggcaccccacttcagaataatctcatggagctttggtcc
cttatgcattttcttatgcctcatctgttcgagtctcataaagatttcaaagattggttc
tcaaaccctttatcgggtatgatagaaggaagcagcgaatataacgaaaatcttatcaaa
cgactccataaagtattaaggccttttctccttcgtcgtttgaagtcagaagtcgagaaa
caaatgcctcaaaaatacgagcacgtgattagatgcagactttcaaaacgtcaacgcgtg
ctttacgatgacttcatgtctcgaacaaggacaaaagaaacgctggaaagtggccatcta
cttagcgtcattaatatattgatgcaattaagaaaggtctgtaaccatcctgatttattc
gaacctcgtcccacgataacttctctcaaaatgactggtatcgtttacactacggcttct
ctagttctcacagttatggaacatgatccattacaatctatcaacttgtttacaatgaac
ttgctgcttacgcaactcgagtttagtttaagcgcattcgcgagtcaccgtgtccgcctg
ctgcaaacaccgtctgctcttataacggaaattgataattacacaccgtctcaaacgcca
atcttactcccagtgaaaacaaaattctcacaacctccaaacggcgagcattttaaagat
gttaaatcaaattcatatgaacaatctgtgtggagtgagatgaacatgtatcctgatgca
ctctaccctggatatgggggcaaaacgtataccctaccctctgaacaagattactacaat
gctcttgaagcggcgaacaacatcactggatcatattccatgattggcgacagacatgaa
gatactcctcgaagtgatattaagtgtgaaggtagtttgccatatggtagtgacgaaatg
aagatctccaaaattttgcataccaatgagagtcgagtcgttaatggtcatgttgggaca
ctagagtctgctgctgttatattagaccagaagtctgctttgacagagaaggcatcacag
atagagtctagtgaagatgttaatttttgtcgtttatcaccgtttgtaatgcctcgttta
gaagagaagcgtttcgttgctcggcaacagaagcttcgtnntttctcaacattgaacacc
agaagatgtgcagcccaaccaatctacggtaaagatctcgtggaatccgttactattctt
cgaagtccactagaattaacttggtatagaacgtccattcataaaccagctatttgtgaa
acgctacaaacctgtactaagtcatcacaggaacgcgttgacgagatgcaagaaattatc
aagaggtttgtgttcgctgttccagccgtacgaacccaacccattcaaatgcatgcatgt
catcctccaccgtcacacgtcactatgcagcaaaatctcgaagaaggattgatacatgaa
gtatcgcacaagctaaacatacttcatccaattgttagagggcagctcttacagtttcct
gaagttcgtctcatacaatacgactgcggaaagcttcaaactttagatgttttattacga
agattgagagcagaaaagcacagagctctcatctttactcaaatgaccaaaatgttgaat
gttttggaacgttttcttaactatcacggctatctttatcttcgtcttgatggaacaaca
cgcgtagagcaaagacaggtacttatggagcgtttcaacaacgatcgaaaaatcttttgt
ttcatcctttccactcgaagtggtggcgtgggagttaacctaacgggggcagacacagtt
atattctacgacagtgactggaatccgaccatggatgctcaagcacaagaccgctgtcac
aggattggtcaaacgcgtgacgtgcatatttatagattgataagtgaaaagacaatagag
gaaaatatacttaagaaagctcatcagaaacgtttgctaggggagatcgctatcgagggc
ggtaactttaacacaactgtcttgagggaaactaccgtacgagatctgttttctatcaac
gaaaatgatacagatttgcaagagatgggaacagctaaagagaatagtttgacacaacaa
acttcaaacgatcaagtttcaaagaagaatccgaaatcacagaatgcatttgaggaggcg
ttaatgaaggctgaagatgagcaagatgtacgagcagcttcattagtgaaagcagaacag
gatgctgaacttgctgaattcaatgaaaatatccctcttgacgatgatacagccttgggg
caatgtctttcaaaggttgaagaagagctacgtgaactagagagtcagctgtctggtgtt
gaacgctatgctgtaaagttcgtcgaagccactcagatctttgcaactaacgaagagctt
gaagttgacgagaaaaaacttgagttgtctaagaaagactgggaactacgtcatatccag
tccctaaaggaggaggaagagaagcattctaatactgggaactgtggcgaacagctcgag
gtcacatatacaactgaggaatctaagcaggttaaaaaatctaagaataaatctaacaaa
agtgaaaaaacttataccggaaagaaaccttcggcaaattctagcacgatcttctcaaaa
cctaccactttaaaagggcaggccaaactgccatcggcatcaacgtcttccgatctcgct
gagatgaatgtcgagggaggtcctgccagttcatttcgatctgttcgaagtactagcaag
cgtagtactcgtcaaaatgcccgcctgtctcgatggatagagtttgtcgatgaagttact
ggtgaagaaatgcctttatggcgaccgcttacccctccaagtgaaggcaaagacgatatt
tatgttgatcactcgcaaaattacatgtacgagtcgaaacctcttcctgaagtactattg
cctagaataacacgtacaagacgttatcttggggactataagaaacacggtcgacgaagt
gctttcgcatttaaacatccttataaggaggcagtaagacggggtcttcgtaaacctcat
tcaatattcgatcgtcgtgcactggaagcgttctttaaaatcgtcgcaatgttaagtaat
gcaaagaaggcgaagatgaaaatgactaaacaaccttcccaaacttcacaacaagcgcaa
caacaagcgcaacaacagcattctgtaagacaacaaggcgacttacaaatgattgataca
ggtcccgaatggtttgtacacgaagattgggcattattgcaggcagtccattatcttcaa
gaaatgcctattgatcttactgttgttaatcttggtcatacaccaaactggcttttggtc
agcgatatagttaacaccagcagtcgtacatatagaactgcgcgacagtgtcgagatcgc
tatgtcaatgttgtaatgcctagagaagacggaaaagctccgttgattgaggagagggaa
aagaaaatgaagacaaaacttaaagcaccatatgcacccccggaatactcagcattcgtt
ggaaatcaacctttacccaaaccaaaagatggtcacggtacaagattacacgctctgcat
gctcatgacaatggtcgttccagtaccattcatcattcgtctttatttgaactggtgaaa
aaaacatccgtcaaacgtaaaccaaatgtgaaacatagtataaacactgaaccttatcaa
aagccaggaaatggacaggggaattctgttactggcgttaatgttgaagatgtctacctt
gatcctgcaaaaattgctgctatgaaagtagaaaggattcaacgtgagaaagctgaggct
gtacgtcaacaacagcagcagcagcaacaacaacagcaacaacaacaacaacaacaacac
acaagtaaagaacaccagcaacaattgcaaacacaaccagttgttcatgctttgtctcag
cttcctacatcttctattgcgacaaaaattactgtaacggctcaacaacctgtacaatta
gcttctgctggtcaacagcaggctcaagtgatgccgacctaccaaaatcagagacttgct
aacgcacagtctcaaatattaacgtcgacaagtcagaaaattactactgctcgaatggct
gccactttgagcagtaaacaagttgcaaatttgcaaggcgtcgcctcaatcccgggtacg
ctggtcaagacagctgcaggctctaatattgttgttaaagcacccggtaacgtagtcggt
ccgctgaccatgagcaaaagactggcaacgcaaactggtaatccaacagcgccgaccctt
accactatgaaaacaggtgtatctagtgaaaatcgtcctttggccaatagagattctgct
gtccagtttctagcgtcagctgctaacggcaatattcgtttatcaacaaccactttatct
ccttccaatacacttgttgtttcccaaacacagactggacaaagacttcaagatccatta
cacgcaggcaaattcatggctccaaaaacgtttatgcaaactggtacgaagcaattaaca
cagcagcaattcaacctattacagaaacgcctggaacagcaccagcaacgttgtcagcag
caagcagttgtacaaccttcactacccatcaaacaagttgtgcaacaaccaggtagtatt
cgaaagattgctcctccaaccacgcagaaacttctatcagtaggagcgaaggttgagcaa
caacgtctaccgcagacaatgactatcacacgaccaatgcaacaaacagtgcaacagcct
gcaacacaggtgcaacaagctacgcaacagcagcttcaacaactggtgcaacagcaacac
ttaaaacaattacaggttcaacagaagcaacagcaagataaaacaacaccaatccatctt
gtaacaacgcaacagcaacatcttccagtcacatcacaacaaattaaacgagtgcaactt
cctactgcacaacaagtcactactggcttagcccagacaggtttggtaacaacggcaggt
atgggtggtgcaccaactaaacatgttgtgaaacttattcctggacaacatacctatcat
catgctagtcttgtgaaacaacgtttgcaacaacaagcaaaacaagttgctcattcaagg
caacaacagccagttcaaactggcctatcacagtcaagcacagaaagcaattcaacatca
gcttcctcagtaacgaatgtacaaacacttttgcaaacatcgttaacaactcattcaagt
ccacagatacaacaacagtctatggacaagcctttacagccaaagctgccactaaacaaa
ccaattactgcaagcatagctggtcaagctataacatcactacagggcgtagtaagtacc
atgactgtttcaagtacagttgtgtctaccacaacttcctctacacaaggaattcaaagc
attaacacaaacaatcagcatcaatcgccatatgcaatgagatcaagaagtcaatcaaaa
tga
DBGET
integrated database retrieval system
