Xenia sp. Carnegie-2017 (soft corals): 124435408
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Entry
124435408 CDS
T08024
Name
(RefSeq) protein NEDD1-like
KO
K16547
protein NEDD1
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xen03036
]
124435408
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xen04812
]
124435408
Chromosome and associated proteins [BR:
xen03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
124435408
Microtubules and associated factors
gamma-tubulin ring complex
124435408
Cytoskeleton proteins [BR:
xen04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
124435408
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WDR55
WD40_RFWD3
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_IFT122_1st
Cytochrom_D1
NBCH_WD40
WD40_like
Beta-prop_SPT8
HALZ
DUF7165
WD_LRWD1
NRBF2
DivIC
Motif
Other DBs
NCBI-GeneID:
124435408
NCBI-ProteinID:
XP_046841301
LinkDB
All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
MTDGYKLVSGGDDIKLWKWPELKLLYSLKPHSNAVTSLAWSPNNNYLASTAVDNTIVVTS
FTKSAPASIELEGCENDTCLGFNATSRHLVTAGRDKIINIWDLKTRTIKKKIKGPSDAIS
CVTFNWNDTSVAVGTTKGDIVLNSLSTSLTSMPMRLLNTQVLSTITFSDSLRHSIFTIQK
SLLGSVSDDGALNIWDTNTKKISCSFHDGHAAPAMDLSFSPMNDMLLATVGLDKRIVFYD
ILGKKIIKEMQIESPLTSISFMHDGATFAVGTTRGKISLYDLRSGSTPLSSTMAHKSLVQ
CVSFQLPPKSSSSSSSSATLAAKLVSRSATNVGDKKETTASLVQSIAGKPKIVQSSAHNE
NQHTEENDLFSPLRDGTYASTVKLVETNRDADEKMNANISDYKTGASSSKIFSPVNNETD
SYHLPLQRSDSTPNLNDVTISSTSKDIPYVTRQPWAVSNIASNSGDLPPEASKTEKTRRG
ALKLGRNRPSLGRRAVSSTELKVSRQASELGTTQKMADISLTSGKEVLNGQISPTPKNNE
KLPGFHEYQIKFVKNLIEDSMDEFRMNFHQDVVNLQVEMLRQFQIQQNEMKTLLQQHSSN
DALVAENERLREEIKRLKSTH
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggttataaactagtgtctggtggagatgatattaaattatggaagtggcca
gaactgaagcttttgtacagtttaaaaccacattcgaacgctgtcacttctcttgcttgg
agtcccaataataattatttggcaagtacagcagtggacaatacaattgtagtcacatca
ttcacaaagtcagcaccagcatcaattgagcttgaaggctgtgagaatgacacatgtttg
ggcttcaatgccacatctcgacatttagtgactgctggaagggataaaattataaatatt
tgggacctaaagacaaggacaatcaaaaagaaaataaagggtccatcagatgcaataagt
tgtgtgacatttaattggaatgatacaagtgtggctgtgggaaccactaaaggagatatt
gttttaaatagtctgtcaacgtcacttacctcaatgccaatgcgtttattaaatacacag
gttttatctactatcactttttcagacagtttacgccattcaatattcacgattcaaaaa
tcattactgggttctgtcagcgacgatggcgcgttgaacatctgggatacaaatacgaag
aagatttcctgttcttttcacgatggacatgcggcgcctgcgatggatttaagtttttca
ccaatgaatgatatgttattggcaacagttggtcttgacaagaggattgtgttttatgat
atattggggaaaaagattattaaggaaatgcaaatcgaatccccactgacctctatatcg
tttatgcacgacggagcaacatttgctgttggaacaacacgtgggaaaattagcttgtac
gacctgcgatcaggtagcactcccctttcatccaccatggctcataaatccttggtgcag
tgtgtctcattccagttgccaccaaagtccagtagctcatcttcgtcgtctgctacgttg
gcggcaaaattggtgagtaggtcagcaacgaatgttggcgataagaaagagacaactgca
tcattagtccaaagtatagctggcaaacctaaaattgtccaatcatctgctcataacgaa
aaccaacatactgaagaaaatgatttattttctcctctcagagacggaacatatgcgagc
actgtcaaacttgttgagacaaaccgtgatgcagatgaaaaaatgaacgcaaatatatct
gattataagacaggtgcatcatcgtctaaaattttctctccagtcaacaacgaaacagac
tcctatcatttgcctcttcaaagatccgactcgactccaaatttaaatgacgtcaccatt
tcatccaccagtaaagatataccttacgttaccaggcaaccatgggctgtttctaatatt
gcttcgaattccggcgatctgccaccggaagcatccaaaacagagaaaacacgacgagga
gctttaaaactgggtagaaatagaccaagcttaggaaggagagccgtatccagcacggaa
ctgaaagttagcagacaggcgagtgaattggggacgacacaaaagatggccgatatttcc
ttgacgagtggtaaagaagtcttgaatggtcaaatctcgcctacaccaaagaacaatgaa
aagcttcccggctttcatgaataccaaataaaatttgtcaaaaatctcatcgaggactcc
atggacgaattcaggatgaacttccatcaagacgtcgtgaatctgcaggtagaaatgctt
cgacagtttcaaatccaacagaacgaaatgaaaacgttattacaacaacattcatcgaat
gacgctctagtggccgagaatgaacgattacgggaagaaattaaacgtctaaaatctaca
cattaa
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