Xenia sp. Carnegie-2017 (soft corals): 124435485
Help
Entry
124435485 CDS
T08024
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xen03041
]
124435485
Enzymes [BR:
xen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124435485
Spliceosome [BR:
xen03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
124435485
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Ubiquitin_TPR1
CMS1
LodA_C
Motif
Other DBs
NCBI-GeneID:
124435485
NCBI-ProteinID:
XP_046841404
LinkDB
All DBs
Position
Unknown
AA seq
899 aa
AA seq
DB search
MHRRVIAHRLNAKRRTADVLINEKVDFSGLILSKDVLKGLKSAGFERPSPIQMKAIPIGR
CGVDLIAQAKSGTGKTCVFSVIALENIILTKMSQQVLVLVPTREIAVQIKDVMNSIGQHM
QGLHVNVFIGGLSIXDDKNKLKLCQIAIGTPGRVKHLIDSKLLSTSSIRLLILDEADKLL
EENFQDQINWIFSTLPESKQVLALSATYPNYLSKHLQKYMRNPTFVCLNAMDPALEGEDS
SLFCTIPSHSLPHKTFDEKVNNLLVMLSQISFHQCLIFSNYQIRAKNLSETLAKNGFLST
HISGGQGQNERLDAMRKLKEFKCRILISTDLMSRGIDAERVNLVINMDLPRDSETYLHRV
GRAGRYGSYGVAINFVAAGKEESSLKDIEIKCGINFDPMPEDLSELICEDAFAECSLMKS
KGEIPSLTSTAATTIVGEGKAKEDDVVCSETTNLVHNGETSSTMTKENLVEGLNGGAKNK
IHEIVAFTDIVVDKSFECVHINEQKKNKEMLTGAIENNSDNSESSTTEILNYGIIKDDEL
AENKNIYTSQASVVAGVCRQGNGQTVEDPGIMGNVKNEFVDVKSENVAVENQEGTTSKVN
SVEGKEIKSEHNIETMYDTQNKLNNFKSAMIYPSTSQVIFHKQWGNGFFTEKNKLDECKM
SESSVCDDCVLSSQNCEESCDSTEESCDSTEESCDLSEESSSACEESYESYENLRGSCKD
SRVSCEVAHDLCVKLRDLCEKSSDLHAPISCRYFDDMFVKHLNYHANTGLHKDLENEKPL
SCLAKRTSLLNEVNEFGSTEFVSGYGREVFEMRTSAPQECVGAQSCNLETNKTNTTVNST
DSLNIWNHGNEAMFYGATTDDVTAYMAQLPVDWTSMWYRAYDKQTNHIMKYTKFYHESY
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgtagagttattgcacatcgtttaaatgcaaaacgtcgcacagcagacgtctta
atcaatgagaaagtcgatttctcagggttaattttatccaaagatgtcctcaaagggttg
aaaagtgctggatttgaaagaccatcaccaattcaaatgaaagctattcctattggtcgt
tgtggtgtagatttgattgcacaagcaaaatctggcacagggaaaacatgtgtctttagt
gtgattgctttggaaaacatcattcttacaaagatgtctcaacaagtgttggttcttgta
ccgactcgagagatagctgttcaaatcaaggatgtaatgaactctattggtcaacatatg
caaggacttcatgtaaatgtttttattggtggtttgtctatttaagatgacaagaacaag
ttgaaactttgtcaaattgctattggtacaccaggacgggtcaaacatctaattgacagc
aaacttttgtctacttcttccattcgattgcttattcttgatgaggctgataaactattg
gaggaaaactttcaagatcagatcaattggatattttcaacacttcctgaaagcaagcaa
gtgttggctttgtctgcaacctatccaaactatcttagcaagcatttacagaaatatatg
agaaatccaacttttgtttgtttaaatgccatggaccctgcactagaaggtgaggattca
tcattattttgtacaataccaagtcattctctcccacataaaacatttgatgaaaaggtt
aataatttactggttatgttgtcacagatatctttccatcaatgccttatcttttctaac
tatcaaataagagcaaagaatttgagtgaaactttggctaaaaatggatttctttctaca
catatttcaggtggtcaagggcaaaatgaacgtcttgatgcaatgaggaagttgaaggag
ttcaaatgtcgtattttgatatcaacagatcttatgtctcgtggcatcgatgctgaacgt
gtgaaccttgtgattaacatggatcttccacgtgactctgagacatatttacatagagtt
gggagggctggacgttacggatcgtatggcgtggccataaatttcgtggccgcaggaaaa
gaggaatcaagtttgaaagacatcgaaattaaatgtggaataaacttcgatcctatgcca
gaagatttatctgagctcatatgtgaagatgcgtttgctgaatgtagtttgatgaagtca
aaaggtgagataccttcattaacttctacggctgctacaaccatagttggagaagggaag
gcgaaagaagatgatgtcgtttgcagtgaaactacaaaccttgttcataatggcgaaacg
agttccacaatgacgaaagaaaatttagttgaaggcttgaatggaggagcgaagaataaa
attcatgagattgtagctttcactgacattgttgttgataaaagttttgaatgtgttcac
attaatgaacaaaagaaaaataaagaaatgttaacgggagcaattgaaaataattcagac
aatagcgaaagttccacaacggaaatcttgaactatggcattattaaagatgatgagttg
gctgaaaacaagaacatttacacatctcaagcttctgttgttgctggcgtttgtcgtcaa
ggaaacggacagactgtcgaggatccaggaattatgggtaatgtgaaaaacgaatttgtt
gacgttaagagtgaaaatgttgctgttgaaaatcaggaaggtacgacatccaaagtgaac
agtgtagaaggaaaagaaatcaaaagtgaacacaacattgaaacaatgtacgatacacaa
aacaaactaaataactttaaaagtgctatgatttatccttcaacgtcacaagtcatcttt
cataaacaatggggtaatggattttttactgagaaaaacaaattggatgaatgtaagatg
tcggaatcctccgtttgtgatgattgtgtattatcaagccaaaattgcgaagagtcatgt
gattctactgaagagtcatgtgattctactgaagaatcatgtgatttgagtgaagagtca
agtagtgcgtgtgaagagtcgtatgaatcgtatgaaaatttgcgtggttcgtgtaaagac
tcgcgtgtttcgtgtgaagtagcacacgatttgtgtgtaaagctgcgcgatttgtgtgaa
aaatcgagcgatttgcacgcgcctatctcatgcaggtattttgatgatatgtttgtaaaa
catttaaactatcatgcaaacacaggccttcataaagatttagaaaatgaaaaaccatta
tcctgtttggcaaagagaacaagcttgctcaatgaggttaatgaatttggctcaacagaa
ttcgtctctggttatggaagagaagtttttgaaatgagaacttctgctccacaagaatgt
gttggtgcacaatcctgcaatttagaaactaataaaacaaatacgacagtcaattccacc
gattccctcaacatatggaaccatggcaacgaagccatgttttatggtgccaccactgat
gacgtcacagcttacatggcgcagttgcccgttgattggacaagcatgtggtatagagcc
tacgataaacaaaccaatcacataatgaaatacacgaagttttatcatgaaagttattga
DBGET
integrated database retrieval system
