Xenia sp. Carnegie-2017 (soft corals): 124436179
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Entry
124436179 CDS
T08024
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35 isoform X1
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xen03041
]
124436179
Enzymes [BR:
xen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
124436179
Spliceosome [BR:
xen03041
]
Complex C
Other components
Complex C specific factors
124436179
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
ABC_tran
Cas3-like_C_2
AAA_7
nSTAND3
AAA_19
NB-ARC
Motif
Other DBs
NCBI-GeneID:
124436179
NCBI-ProteinID:
XP_046842079
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MAAGGMRLQFWKPGTEAPSIQHERTDKDGEEAGVVAFPSDVVSSSIARLRQRLPVFKHRT
NILYLVEKYQTVIIVGETGCGKSTQIPQYLFESGLASHGKVIGVTQPRRVAATSVAMRVA
EEKGTMIGQEVGYHIRFDDCTDPQKTAIKFVTDGMLIREMMADPLLTKYTVIMLDEVHER
TLYTDVILGLLKKIQKKRKDLKLIVTSATMDAEMFRDFFNTNISKDKSKDTAAILSVEGR
TFPTEIYYVLSPVADYIKASVDAVIGIHLEQEPGDVLVFLTGQDEVESAVSMIIQKARTL
PKGHGFLKVLPIYSGLSHAEQMRIFERSKPKERKAVVATNIAETSLTIDGIVYVVDCGFV
KIKTYSVDTGLESLVVVPVSQASADQRAGRAGRVRSGKAYRLYTEDAFHNLSPAGVPEMQ
RTNLAPVILQLKSMGIDNVLRFDFLARPPAEHMIRALELLYALEALDDDGCLTTPLGVNM
AEFPLEPNLAKMLLVSGEFGCSEEILTIATMLQIKNVFVTPSNEKRASARAKLKFSVYEG
DHLSLLNVYQSFLQHKKNSKWCHENFLNYKGLCHAIKIREQLKRLIKSFGVALRSVEDDP
TPILRCIVKGFFANAARLHADGTYRSVRENHPLYIHPTSVLYTEKPLQWIVYHELQQTSK
EFMRDITVIQSSWLYELAPHYYEYGTARELAAKRAKHE
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggagggatgagattgcagttttggaaaccagggacagaagcgccttccatc
caacatgaaaggactgataaagatggcgaggaagctggagtagttgcctttcccagtgat
gttgtgtcatcgtctatcgcgagattgcgtcaacgattgcctgtgtttaagcatcgtaca
aacattttatatcttgttgaaaaataccagacagtcataattgttggtgaaactggttgt
ggtaaatcaacacagatccctcagtatttatttgaaagtggtcttgcttcacatggcaaa
gttattggtgtaactcaaccaagaagagttgctgcaacatcagttgctatgcgtgttgct
gaagaaaaaggaaccatgattggtcaagaagttggttatcacatacgatttgatgactgt
actgacccacagaaaactgccatcaaatttgtaacagatggaatgttaatccgtgaaatg
atggcggatcctttactaacgaagtacactgtaataatgttagatgaagtacatgagagg
acattatacactgacgtcattttgggtttgctcaaaaagatacaaaagaaacgaaaagat
cttaaactcatcgtgacatcagcaacaatggatgcagagatgttcagagacttttttaac
acaaacatatccaaggataaaagcaaagatacggctgcaattctgtctgtcgaaggacga
acattccccactgaaatctactatgtcttaagtccagttgctgactacataaaggccagt
gtcgatgccgtcataggaatacatttggaacaagaaccaggagatgttttagtgttttta
accggtcaagacgaagttgaaagcgctgtgtccatgatcattcaaaaagcaaggacatta
ccaaaaggtcatggatttctcaaagtgctgcctatttacagtggtttatctcacgctgaa
cagatgcgtatatttgaacgttcaaaaccaaaagaacgcaaggctgttgttgcaacaaat
atcgccgagacgtcgttaactatcgatggaattgtttacgttgtcgactgtggttttgtc
aagataaaaacatactcagtagatacaggactcgaatccctcgtcgttgtaccagtatcg
caagcatccgctgaccagagggccggcagagcggggcgcgtgcgatcaggaaaagcatac
agattatacacagaagacgcatttcacaatctctctccagctggtgttcctgagatgcaa
aggactaatttagctccagtgatactgcagctgaaatccatgggaatcgacaatgttttg
agattcgattttttagcgaggcctccagccgagcatatgataagagcactggaactgctt
tatgctctagaagctttagacgatgacggttgtcttacaacgccactcggggtaaacatg
gccgagtttcctctcgaaccaaatctggcaaaaatgctcttggtttcaggcgagtttggt
tgctctgaagaaatactgacaatagccacgatgcttcaaataaaaaatgtctttgtgaca
ccgtccaacgaaaagagagcatcggcacgagcgaagctgaagttctctgtgtacgaaggc
gatcatttatctttactgaatgtgtaccaaagctttctacagcacaagaaaaactcaaaa
tggtgtcatgaaaattttcttaactataaaggtctttgtcacgctatcaagattcgagaa
caactcaagcgtcttataaagtcatttggtgtggccttgaggtctgttgaagacgaccca
actcccattttacgttgcattgtcaagggatttttcgctaatgcagccagactccacgcc
gacggcacttacaggagtgtcagagaaaatcacccactttacattcatccaacgtctgtg
ttgtatacagagaaaccacttcaatggatcgtatatcacgagttgcaacaaacatcgaag
gaatttatgcgagatataactgtgatccagtcctcttggctgtatgaacttgctcctcat
tattatgaatacggcactgctcgagaattagcagcaaaaagagccaaacatgaatag
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