Xenia sp. Carnegie-2017 (soft corals): 124436434
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Entry
124436434 CDS
T08024
Name
(RefSeq) RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xen03041
]
124436434
Spliceosome [BR:
xen03041
]
Common components
Common spliceosomal components
General mRNP proteins
124436434
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_PARP14_3
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
124436434
NCBI-ProteinID:
XP_046842316
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MADEFDIEAMLEAPYKSAENGKSKKHDSDDDDDGKSKRSRRKRSKSRSRSGDRRRSKRSR
SGERRKRRSRSGERRSRRSPSPDRRRRSPSPRRRPSRGDEKRDRDRKRRSRSGSDDSGHW
QVLPRDETISAEERDRRTVFCMQLSRNIRPRDLEEFFSKVGQVRDVRIISDRNSRRSKGI
AYVEFTDASAVPLALKLTGQRLLNAPIIVQETQAEKNRLAAEAEKLKRPLGPTRVYVGSL
HFNITEQMIKAIFEPFGVIDTVQMIMDSETGRSKGYCFIQFRDPDSAKRAMEQMNGFELA
GRPIKVGPVTERTDTGGMSFLDDEEYEKGGIVMNTAARAALMQKLSQTHSAGLTVPGAPP
ANPAVSILQTPVSIPLPTPCLMISNMFDPSKEQDKDWHLDIQDDVLDELSKLGGIVHIHV
DQTSMQGNVYLKCVTPDIAVAAVKTMHGRYFAGKQLLAKTMPLSQYHGMFPNAAMAVKPL
KPTA
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgaatttgacatagaagccatgcttgaagcgccgtacaagagtgcagaaaat
ggcaagtcaaagaaacatgactcggacgacgatgatgacgggaagagcaaacgatcacga
cgcaagcgcagtaaaagcagaagtcgaagtggagatcgacgtcgcagcaaaaggtcgcgt
agcggagagagacgaaagagacgaagtcgtagcggggaacgacgatcacgtcgtagtcca
agtccggacagacgtcgtcgtagtccaagtcctagacgacgaccaagtaggggagatgaa
aagcgtgatagggatagaaaaagaagatcgcgaagtggtagtgacgacagcggccattgg
caagttttacctcgtgatgaaacaatctccgccgaagaacgagatagacgtacagtcttc
tgtatgcagctctcgaggaacataagaccacgtgacttggaggagttcttttcgaaagtc
ggacaagttcgtgatgttcgaatcatatcggatcgtaattcaagacgatccaagggcatt
gcatacgtagagttcacggatgcttctgccgttcctttggctttgaagctcactggtcaa
cgtttgcttaacgcacccatcattgtacaggagactcaggctgagaagaacagactagca
gctgaggctgagaaattgaaacgtccgctaggaccaacacgtgtttacgttggctcatta
cattttaacattaccgaacaaatgatcaaagcgatatttgaacctttcggcgttatagat
actgttcagatgatcatggattccgaaacaggaagatccaaaggatattgctttatacaa
tttcgtgatcccgatagtgcaaaaagagctatggaacagatgaatggatttgaactcgct
ggaagaccaataaaggttggtccagtaacagaacggacagatactgggggaatgtcattc
cttgacgatgaggaatacgagaaggggggtattgtaatgaacactgctgcaagagctgct
ctgatgcaaaagttatctcaaacacattcagctgggttaactgtaccaggtgcgccccca
gctaatccagcagtatccattctgcagacaccagttagcattccattaccaactccttgc
ttgatgataagcaacatgtttgatccttcaaaggaacaagacaaggactggcatttggac
atacaggatgacgtcttggacgaactctcaaaattaggaggcatagttcatattcatgtt
gatcagacatctatgcagggaaatgtttacttgaagtgtgtcacacctgatattgctgtg
gctgctgtgaagacgatgcatggtagatattttgctggtaagcaacttctggctaaaacg
atgcctttgtctcagtaccacggaatgtttccaaatgcagccatggctgtgaaacctttg
aaaccaacagcttga
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