Xenia sp. Carnegie-2017 (soft corals): 124436474
Help
Entry
124436474 CDS
T08024
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xen04040
]
124436474
Ion channels [BR:
xen04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124436474
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
Ank_KRIT1
Extensin_1
Hmw_CFAP97
PhosphMutase
Motif
Other DBs
NCBI-GeneID:
124436474
NCBI-ProteinID:
XP_046842360
LinkDB
All DBs
Position
Unknown
AA seq
1268 aa
AA seq
DB search
MGNTAMSNRSWKWTKLDLTQDTVNEPKDLALTPLLSIEAESETNIVERDDNKMKDINRMK
FAVFNDDEKMINDILREKTSEREIQNLLAELDEKGRPCIFYAVEFRSLRALTCLLNQVKD
TKCVTAKNGETVLHVATEMNDAGILKKLLDHDFVVHLVNDVESKNSRSPLFFAAMYNFVD
VAKVLLEHGGNMTKVDGSNRSPLYIAAEKGRAGLLDLFLKHEKSRVKELLFSKEHGGKHH
QNILHVVVDSGDESTVEVCLQQDEDMIRSCLQEEMNSGGSYLVDAVRKNGLEEILSRFID
TLGDSLVQQNKIREEPVGDSLVQHAAIIEEPQEALPVQHAMIIEEPVEALPVLVQHATIL
EEPLEALPVQHAAIIEEPVEALLVQHAAIIEEPVEALLVQHAAIIEEPVEALPVQHAAII
EEPVEALLVKHATLIEESVEALLVQHAAIIEESEEALPVQHAAIIEEPVRHSLVPLDEKR
KELVRDSLVQHDEKIEELRGDTKSKRRNIREESNFNHLSDEIPHNGQASPTCPRDRYAGF
SHRALLLAVEGGHVEDVKEFLKENRFVKRDKNGTVLHYAVAHPELLKILLKESDIVSLIN
EERTDDGYAPIHAAAKEGRVESVKILIDNRAHLNVLSENQSSPLHCAVSSQNLGVIKLLL
DNCRELIVKVNDNNETPLHTAAYYSSSRVVEYLLKYEIFMTSDIDYPTPLHIAACHGHLE
TVKLLLKHKPSLINHKDKDGETPLFKACSNGKTDVVKFLLDNKADISNGNKVTSKDYVSY
FDAMISNGNKDTAMAMMCHERWKEIMETTKHGPEATMKKLISQGMSEVAYQALVNSETHT
GDPESKNYEIKYDFMCLQKNNARANGNVKPLTAIEAMVKSGSYKCLQHPVCCKYLKEKWK
AFGFKVYLVGFLIYVVFLVSLNVYAFKIPSYEESINNQELPDASITVMIAMSICLVSAGF
QTMKEICQLVLNRESYLRDPVNYLEWTLFISTFIFTAPINDNISVKTSLQWKACSVALFC
AWMNLIMYFRRFAYYGIVIQMMRKIFVTLIKVLSLLLFFFVAFAAAFTVILNDREGFGNF
RTSMLTTAIMTIGEIDFKETFLRHHYYNMFYPTQIVLFVVFVVVMPVVIMNLILALAIED
VSKIKKDAKLRKHIHTANMIINLERKKFIFSYFTKKEKPLKSPLVELPNKEGGLSNFVDG
IIFYDFSSDKEDVSSEQVEKNEDLVTLIKMIKELQIQNAKVLKKSKKNSRLIKNISRIEE
KKNDSAQS
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgggtaacacagcaatgtctaacagatcatggaagtggactaagctggacctcacacaa
gacacagtcaacgaacccaaggatttagcattgacacccctgttatctatcgaagcagag
agcgaaacaaatatagtagaacgagatgacaataagatgaaggatattaaccgaatgaaa
tttgcagtatttaacgatgatgagaaaatgatcaacgatatcttgagggagaaaacaagt
gaacgagaaattcaaaacttacttgccgaacttgatgaaaaaggacgaccatgcatattt
tatgccgtggagttccgaagtcttcgtgcgcttacttgtttgttaaatcaagtgaaagat
acgaagtgtgtgacagctaagaatggagaaactgtacttcatgtagccacggaaatgaat
gacgctggtattcttaaaaaattgttggatcatgatttcgttgttcatcttgtgaacgat
gttgaaagcaagaatagccgctcgccacttttctttgctgccatgtacaactttgtcgac
gtcgccaaggtgttgctggaacatggtggaaatatgacaaaagttgatggctcaaacaga
tcaccattgtatatcgctgcagaaaaaggacgagctggcttgctcgatctattcttaaag
catgaaaaaagtagagtgaaagagttattgttcagcaaggagcatggcgggaaacatcac
caaaatatacttcatgtagttgtggacagcggagatgaaagtactgtagaagtttgtctg
caacaagatgaagatatgatacgttcctgtttgcaagaagaaatgaatagtggtggtagt
tatttggttgacgctgtccgtaaaaacggcttggaggaaatattgtcaaggtttattgat
acgttgggagattcacttgtacagcaaaacaagataagagaagaaccggtgggagattca
cttgtacagcatgccgcgataatagaagaaccgcaagaagctttacctgtacagcatgcc
atgataatagaagaaccggtggaagctttacctgtacttgtacagcatgccacgatacta
gaagaaccgttggaagctttacctgtacagcatgccgcgataatagaagaaccagtggaa
gctttacttgtacagcatgccgcgataatagaagaaccggtggaagctttacttgtacag
catgctgcgataatagaagaaccggtggaagctttacctgtacagcatgccgcgataata
gaagaaccggtggaagctttacttgtaaagcatgccacgttaatagaagaatcggttgaa
gctttacttgtacagcatgccgcgataatagaagaatcggaggaagctttacctgtgcag
catgccgcgataatagaagaaccggtgagacattcacttgtaccgcttgacgagaaaaga
aaagaattggtgagagattcacttgtacagcatgacgagaaaatagaagaactgagggga
gatacaaaaagcaagagacgcaacataagagaagaatcgaatttcaatcatttatctgat
gaaatcccgcacaacggccaagcgtcgcctacgtgtccgcgcgatcgttatgcaggtttc
tctcatcgagccttgctccttgcagtagaaggtggtcatgttgaagacgtgaaagaattt
ctaaaagaaaatcgtttcgttaaaagagataaaaatggcacagttcttcattatgcagta
gctcatcctgaactactgaagattttgctgaaggaaagtgacattgtttcattgataaat
gaagaaagaacagacgatggttatgctccaattcatgccgcagctaaagaaggccgagtc
gagagtgtgaaaattttgattgacaaccgtgctcatctgaacgtcctctcagaaaaccaa
agttcgccattacattgcgctgttagttctcagaatcttggtgtgattaaattattactt
gacaattgtagagagttaattgtcaaggttaatgacaacaatgaaactccgcttcataca
gctgcatactatagtagctcacgggtcgttgaatatcttctgaaatacgaaatatttatg
acgagcgacatcgactatcccactccacttcatattgcagcgtgtcatggacatctcgaa
actgttaaattgctgctaaaacacaaaccttccttgatcaaccacaaagacaaagatgga
gagacaccactgtttaaagcttgctcgaatggcaagacagatgtagtgaaatttttactc
gataataaagcagacattagtaatggaaataaagttacaagcaaggattacgtttcttat
tttgacgcaatgattagtaatggaaataaagatacagctatggcgatgatgtgccatgaa
agatggaaagagataatggaaacaacaaagcatggtcctgaagcaacgatgaaaaagttg
atttcccaaggtatgtccgaagtggcatatcaagcactcgttaacagcgagacgcacaca
ggtgatccagaaagcaagaattacgaaattaaatacgactttatgtgtttacagaaaaat
aatgctagagcaaatggaaatgtgaagccgctgactgccatcgaagcgatggtaaaaagt
ggcagctacaaatgcttacagcatcctgtctgctgtaaatatctgaaagaaaaatggaag
gcatttggattcaaagtttatttggttggatttttaatttatgtcgtgtttctggtttct
ctaaacgtttatgcgttcaaaattccttcatacgaagagtcaattaataatcaagaatta
ccagatgcatcaataactgttatgatagcgatgagtatctgtcttgtttctgccggcttt
cagacaatgaaagaaatttgtcagttggtgcttaacagggagagttatttacgcgaccca
gtcaactatttggaatggactctcttcatatcaacattcatctttactgcaccgattaac
gacaatatctctgtaaagacaagtttacaatggaaagcctgttctgtggcgttgttctgt
gcttggatgaatcttattatgtatttcagaagatttgcctactacggtattgttatacaa
atgatgaggaaaattttcgtcacattgatcaaggttttgagtctgttattatttttcttc
gtcgcgtttgcagcagcttttacagtgatactgaatgacagagagggattcgggaatttt
cgaacctcgatgttaactacagcgatcatgacgatcggagaaattgattttaaggagaca
tttcttcgtcaccattattacaacatgttttacccaacacagatagttctttttgtcgtt
ttcgtcgtcgtcatgcctgtcgttattatgaacctcattctcgcccttgccattgaggat
gtatctaagattaaaaaggacgccaaattgcggaaacatattcatacggcgaacatgatc
atcaaccttgaaagaaagaagttcatattttcttatttcacgaaaaaagaaaagccactt
aaaagtcctttggtggaattgcccaacaaagaaggtggattatctaattttgttgatgga
attatattttatgatttttcctccgataaagaagacgtgagctcggagcaagtcgaaaaa
aatgaagatctagtgacgttgattaaaatgattaaagaattacaaattcagaatgctaaa
gtgttgaaaaagtcaaaaaaaaattctagactgatcaagaatatttcgcgaattgaagaa
aagaaaaatgactctgctcagtcttaa
DBGET
integrated database retrieval system
