Xenia sp. Carnegie-2017 (soft corals): 124436626
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Entry
124436626 CDS
T08024
Name
(RefSeq) vacuolar protein sorting-associated protein 35-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124436626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xen04131
]
124436626
Membrane trafficking [BR:
xen04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
124436626
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
124436626
NCBI-ProteinID:
XP_046842547
LinkDB
All DBs
Position
Unknown
AA seq
832 aa
AA seq
DB search
MLIKSEIFTILISKSTTYELWREAFFEFLIKKLPFPTMAPPTQLSSQDEQEKLLDEALQV
VKSQSFQMKRCLDKSKLMDGLKHASNMLSELRTSLLSPKSYYELYMAISDQLRHLELHLV
DEFQKGRKVSDLYELVQYAGNIVPRLYLLITVGVVYIKARETSRKDILKDLVEMCRGVQH
PLRGLFLRNYLLQCTRNLLPDLEEDASDVEDGDVKDSIDFILLNFSEMNKLWVRMQHQGH
TRDKEKREKERQELRILVGTNLVRLSQLDGVDVNLYQTVVLKGVLEQVVSCKDAIAQEYL
MECIIQVFPDEFHLQTLSTFLQSCANLHAKVNVKNIIISLHSRLAAFAAKDDGEGIPEDI
KLFDIFSQQVSTIVQAREDMPVEDIIALQVSLINLALNCYEDRFDYVDKVLEYTEEIFSK
KNLTHVEKNNAISRELTRLLKIPVDCYNNILKLLKLKFFAPLFNYFDYDARKDMAIYVIT
NAVENETLIPSQDLVDTILSMVSPLVVDQQDQPPEPDDPEDFAEEQSLMGRFINLFHSEN
LDQQYLILNTARKHFGSGGEKRIKFTLPPVIFSAYRLAMDYNYLEDKDEKWDKKCQKIFQ
FCHQTVGALAKSEYGELSLRLYLQGALTADQHDFSNAETVAYEFMSQAFSLYEDEISDSR
AQLAAITLIMGTFEKMTCFGEENHEPLRTQCALAAAKLLKKPDQCRAVAICSHLFWSASN
SEKAQNERGNEKRVMECLKKALRIANQCMDTTLQVQLFVEILNRYLVYYENGCETITTAI
LKQLMEKIREELPNLESSGEETDQINRHFENTEAHIRSKKEENDDLYSDVNV
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgctaataaaaagcgaaatattcacgattttaatttcaaaatccacaacatacgagctg
tggcgagaggcgtttttcgagtttttgataaaaaaattgccatttcccaccatggctcca
ccgacccagctctcatcgcaagacgagcaggaaaagcttcttgatgaagctttacaagtc
gtcaagtcgcaatcatttcaaatgaaaagatgtttggataaaagcaaactgatggatggt
cttaaacatgcatcaaatatgcttagcgagttgaggacatctctcttgtctccgaaaagc
tattatgaactttacatggccatttcagatcagttacgtcatcttgaattgcatcttgtt
gacgaattccagaagggaagaaaagtttctgacctttatgaattagtgcaatatgcagga
aatattgtaccaagattatatttattgatcactgtcggggtagtttacatcaaggcaagg
gaaacttccaggaaagatatcttgaaagatctcgtggaaatgtgtcgtggtgtgcaacat
ccgttgagaggtttatttctgagaaattatctcctccaatgtactagaaatttgctgcca
gatttagaggaagatgccagtgatgtcgaggatggtgacgtgaaagattccattgacttt
attctcctgaatttctcggaaatgaacaaactttgggtgcgcatgcaacatcaaggacac
acgcgcgacaaagagaagagggaaaaggaacgacaggaacttcgtattttggtgggaaca
aatcttgttcgtctcagtcaacttgacggcgttgatgttaacttgtatcagacggttgtg
ttgaaaggcgttcttgaacaagtggtgagttgcaaagatgccattgcacaggagtattta
atggaatgtataattcaggttttccccgacgagtttcacttgcaaacattaagcacattt
cttcaatcgtgtgccaatcttcacgccaaagtaaacgttaagaacatcattatttctctt
cactcgcgtctcgctgcgttcgcagcaaaagatgacggcgagggtatacctgaagacatc
aaattgttcgacatcttctcacagcaagtatctaccattgtacaggctcgtgaagacatg
ccggtcgaagatattattgccctgcaagtttctctgataaatctcgcgttgaattgttat
gaagaccgctttgattatgtcgataaagttttggagtacactgaggaaatatttagcaag
aaaaacttaacccacgtggagaaaaacaacgccatatctcgtgagcttactcgactgcta
aaaatccccgtggattgttacaacaatatacttaaattgttgaaactaaagttttttgcg
ccgttgttcaactacttcgactacgatgcaagaaaggatatggccatttatgtcatcaca
aatgccgttgaaaacgaaaccctaataccatcacaggacctcgtggataccattttatca
atggtttctcccctagtcgtcgatcaacaggatcaaccaccagaaccagatgaccccgaa
gattttgccgaagagcaaagcctcatgggacggtttataaatttgtttcattcggaaaac
cttgaccagcagtacttgattttgaacacggcaaggaaacattttggtagcggtggagag
aagaggataaaattcaccttaccccccgtgatattctctgcttatcgactggcaatggac
tacaactatttagaagacaaggatgagaaatgggacaaaaaatgtcagaaaatttttcag
ttttgtcatcagaccgtcggcgctttagcaaagtcggaatatggtgaactttctctacga
ctctatcttcaaggcgctctgaccgctgaccaacacgacttctcgaacgctgagaccgtc
gcatatgagtttatgagccaggctttttctttgtacgaggatgaaattagcgattcgcgg
gctcaactcgcggcaatcactctcatcatgggcacttttgaaaagatgacgtgttttggc
gaggagaaccatgaacctttgcgaacccaatgcgctcttgccgcagcaaagttgttgaag
aaaccagatcaatgtcgagcggttgcgatttgttcacatctcttctggtctgctagcaac
tccgagaaagctcaaaacgagcgtggtaatgaaaaacgtgtgatggaatgcttaaagaaa
gcattacgtatcgccaatcaatgcatggacacaacactacaagttcaactcttcgtcgag
atcctaaatcgttacttggtttactacgagaacggttgcgaaacgataacgactgccatc
ctgaaacagctgatggagaaaattcgcgaagaattgccgaacctggaatctagtggcgaa
gaaacggatcaaatcaacagacattttgaaaacaccgaagcgcatattcgctctaagaaa
gaagaaaacgacgacttgtattctgacgttaatgtttaa
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