Xenia sp. Carnegie-2017 (soft corals): 124436804
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Entry
124436804 CDS
T08024
Name
(RefSeq) syndetin-like
KO
K23288
syndetin
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xen04131
]
124436804
Membrane trafficking [BR:
xen04131
]
Protein recycling
Others
EARP complex
124436804
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndetin_C
Vps54_N
Cwf_Cwc_15
Lectin_C
Motif
Other DBs
NCBI-GeneID:
124436804
NCBI-ProteinID:
XP_046842734
LinkDB
All DBs
Position
Unknown
AA seq
1007 aa
AA seq
DB search
MLLFVLIQPLLSLLFPCFIILTYDQVLQFSQKFLRRDCKHGGILRLRVFKDLMAIRSRFR
TLLGLEHARKDEENEVVEESNAATAVFKEGEREFENDPLSNEEIISSIEEVYFSEVDSFD
ASDYELQKLPEVLNINELDTYRNVLRRQAQAVSKSLYMKVLENQTAYMQELQRVIDIQAT
LEFAKKICDSSRSHLEHSRSETSLGGLTVLAKNRKKQHLVNLLDSLGTIKTLQQTDVRLK
EMLQEENYPGAINLCLECEKAARDFKHYKCISELSANLQDILVQIESELDTALAKTCSNF
DPLHYEKLQTAYRYLGKVQVSIDQLHLHFMNAINSEAFLVLLKHVEENRPQDLNEGGIQT
IPFQELCQKVGVEDFTPCLVDLCKTLWKVMLNYHEVVKWHKQNEYLMEGHGSDETDGQIS
YNKKYVTQKLNHGLHRIWKEVQERVKCYLLGTDLSYFKYDDFIHVLDLVNRLISIGEEFC
GSKSEELHESIRTQTVNYFKNYHRSRLEELRMFLENEVWELCPVKANFSLVILQEFRFLK
KIYNSGKGHRRTDSGNIKSEMSELLQSLYFRFNSFDEQKTEDESEDLLSNTGGDVNDNHN
EDEDDDYDDDDDDDDIPEELKLDYVDEKTGEHSPRSSSHTKLGKKLSRNHGPVVTNTTLN
VLRLFGKYMQMMNVLKPIAFDVVICVSQLFDYYLFAVQRFFCPFIMDESKSYDLSTKLST
SLKRIKENLIVDGYSSSEYSDVSSVDDMKVPAPCLSPLTQLNNAEGLFGLSERIVATESL
VFLAKQFESLQPHLESLIPTTKRAFLSQFYSQTVCTAHELRKPIYQAVASRVVDFNMIVH
LMSSVKWDIKEIMSEHNSYVDMLLKELQLFSARVSQIGRSVPVPNEVLMVLWDHCSRRVN
RSFVDGFSCAKKCTNEGRALMQLDYRQFLVKLEKLTTLRPIPEKDFVEAYIKAYYLTAPD
MERWIREHKEYSTKQLTSLVNCGTGSHFSKKEKQRLLNVIEETEKQR
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgcttttgtttgtgctcattcaacctcttctttctcttctatttccatgtttcattatc
ttaacctacgaccaggtgttgcaattttcacaaaaatttcttcgaagggattgcaaacat
ggcggaatactgagactgagagtttttaaagatcttatggctattcgaagccgttttcgg
actctccttggtctagagcatgcaaggaaagacgaagaaaatgaagttgttgaagaaagc
aatgctgcaactgcagtgtttaaggaaggagaaagagaatttgaaaatgatcctttaagt
aatgaagagattatttccagcatcgaggaagtttatttcagtgaagttgattcatttgat
gcaagtgattacgagcttcagaaactccctgaagttttaaatatcaatgaacttgataca
tacaggaatgtgctacgaagacaagctcaggcggtttctaaaagtttgtatatgaaagta
cttgagaatcaaacagcctacatgcaagagctacaacgtgttattgatattcaagccact
ctagagtttgctaaaaaaatatgtgatagtagtcgaagtcatcttgagcattcacgatca
gaaacatcattaggtggtctgactgttcttgctaaaaatagaaaaaaacaacatttagtg
aatttgttagattctcttggaacaattaaaactcttcaacagacagatgttcgactgaaa
gaaatgcttcaggaggaaaattatcctggggcaattaatttatgtttggaatgtgaaaag
gcagcgcgagattttaaacattacaagtgtataagcgaacttagtgcaaatcttcaagac
attcttgttcaaatagagagtgaattagacactgctttagccaaaacatgcagtaatttt
gatccattgcattacgaaaagttacagacagcgtatagatatctcgggaaagtacaagtt
tccatagaccaacttcatcttcattttatgaatgccattaatagtgaagcgtttcttgtt
ttgcttaaacacgtcgaggaaaatcgtccacaagatttaaatgaaggtggaattcaaaca
attccttttcaggaactttgccagaaagttggtgttgaagattttacaccgtgtttagtt
gatttatgtaaaacgctatggaaagtgatgttaaattatcatgaagttgtaaaatggcat
aaacaaaatgaatatttgatggaaggtcatggtagcgatgaaacagacgggcaaatttct
tacaacaagaaatatgtcacacagaagttaaatcatggtttgcataggatttggaaggaa
gttcaagaaagagtgaaatgctaccttctgggaacggatttatcatattttaaatacgac
gattttattcatgttttagatttagtgaatagattaatttcaattggagaagaattctgt
ggtagtaaatcggaagagctgcacgagtcaattcgaacacaaactgtgaattattttaag
aattatcacagatcgcgtctcgaggaactgcgtatgtttttagagaatgaagtttgggag
ttatgtcctgtaaaagctaatttctctttagtaattctacaggaattcagatttctaaag
aagatatacaattcagggaaaggtcacagaaggacagattctggaaacattaaatcagaa
atgagtgagttacttcaatcgttatacttccggtttaactcctttgatgagcagaagact
gaggacgaaagtgaagatttactgagcaatacaggtggtgatgttaatgataatcacaat
gaagatgaagacgacgattatgacgatgacgatgacgatgatgatattccagaggaactg
aagttggattatgttgacgaaaaaactggtgaacattcaccaaggtctagttcgcataca
aaacttggtaaaaaattgagcagaaatcatggaccagttgtcaccaacactactttgaat
gtattaagattatttggcaaatacatgcaaatgatgaatgtattaaaaccgatcgcattt
gatgttgtaatttgtgtctcgcaactttttgattattatctgttcgctgttcaaagattt
ttctgtccctttattatggacgaatcaaaatcatatgatctcagcaccaagctttcaact
tctctgaaaagaatcaaggaaaatctaattgttgatggttatagttcatctgaatattct
gatgtctcgtctgtagatgacatgaaggtaccagctccttgcctttctccgttaactcaa
ttgaacaacgcggagggtttgtttggtctttccgaaagaattgttgcaaccgaatcattg
gtatttttagccaagcaattcgaatcacttcaacctcatttggaatctcttattccgacg
accaaaagagcatttctgtcacaattttattcacagaccgtttgtactgctcatgaatta
aggaaacctatttatcaagccgttgcaagtcgagtcgtagattttaacatgatcgtccat
ttaatgtcaagtgtaaaatgggacatcaaagaaattatgtctgaacacaatagttatgta
gatatgttattaaaagaattgcaattattcagtgcaagagtgtctcaaattggcaggtcg
gttccagtcccaaacgaagtgctcatggttttatgggatcactgctctagacgtgtcaac
agatcgttcgttgatgggttttcatgcgcaaagaaatgtacgaacgagggaagagcccta
atgcaacttgactaccgacaattccttgttaaattggagaagttaaccacactgagacct
atccccgagaaagattttgttgaggcttacatcaaggcgtattatttgactgcaccagat
atggaaagatggatcagagaacataaggagtattctacaaagcaactgacgagtttagtg
aactgtggtacaggatcacatttcagtaaaaaagaaaaacagcgtttgctaaatgtgatt
gaagaaacagagaaacagcgttga
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