KEGG   Xenia sp. Carnegie-2017 (soft corals): 124436874
Entry
124436874         CDS       T08024                                 
Name
(RefSeq) LOW QUALITY PROTEIN: katanin p80 WD40 repeat-containing subunit B1-like
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
xen  Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:xen00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:xen04812]
    124436874
Cytoskeleton proteins [BR:xen04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     124436874
SSDB
Motif
Pfam: WD40 Katanin_con80 WD40_Prp19 WDR55 EIF3I WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_EML ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_SPT8 WDR90_beta-prop_4th eIF2A Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_LRRK2 Beta-prop_VPS8 Cytochrom_D1 WD40_like WDR54 Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 124436874
NCBI-ProteinID: XP_046842811
LinkDB
Position
Unknown
AA seq 712 aa
MTSVTTRAFGKKCWKQHEFVAHGHNVNCLALGRGTGTLMVTGGEDKKVNMWMVGKPNVIL
SLTGHTSPVECVQFNDGEDSVVAGSQSGTMKIWDVEAAKITRTLTGHKSSIKCTDFHPYG
EYISSGSMDTNVKLWDIRRKGCIMTFKGHTDVVNQVRFSPDGRWIVSASNDSRCKLWDLA
SGKLLSEVSHAGPVNTVEFHPKEFLMATGSNDRTVKFWDLEKICLVSTTELESNPVRSVL
FHCDGHCLFSGSIDSLKLYGWEPVRCFDSCTVGWGKISDMVFASGKLVAASFCQTIASIW
EVDFQNIEEMIENFEQLSTKNHEPHEAKILNPPNQIKANEEKKVSPQRKVFDSKRPATSS
SKARKSKLEQPVDKNQVRQQGVHHPLITEMFLRQNLFLSDHRFDQDIFRWQMTMKMIPSR
PSRNLFNLLLLINQKIMIKWKVCRKLPRKSSEKPSEKSVIHKSQETEVTPVVKGNENEKE
VYVKEKPDHIPSSSKPKTLIPSDRDKPAGLDMHEFLPGNDSPTQTNYQDSHFAPSIKISE
EERLDSIRKGHISFTAVLTNRHRNVNMVWRLWNDGDIKGAVQIAINMNDQSTLVDFLGVL
CLKQTLWTLDICSVVLPSVNELLLSRYETYVQTGASIIKLVLRNFSPVIKSNMAAPPVSV
GVDVVREERFQKCQLCHAHLLALRSVIKTKVNVSGRNGSLFRELSLLLSSLD
NT seq 2139 nt   +upstreamnt  +downstreamnt
atgacgtccgttaccacgcgtgcctttggcaagaagtgttggaagcaacatgaatttgtt
gcacatggtcacaatgtcaactgtcttgcccttggtagaggtactggtacacttatggtt
acaggaggtgaagataagaaagttaatatgtggatggttggaaagcccaatgttattctg
agtctcactggtcacacaagcccagttgaatgtgtacaattcaatgatggtgaagatagt
gttgttgctggctcacagtcgggaactatgaaaatatgggatgttgaagctgctaaaatt
acaaggacactcacagggcacaagtctagcatcaagtgtacagattttcacccttatggc
gagtatatttcttcagggtcaatggatacgaatgtcaagctgtgggatatccgacgtaaa
ggttgtataatgacatttaagggacacacagatgttgtcaatcaagtgagattcagtcct
gatgggcgatggattgtctctgctagcaatgacagtcgatgcaagttatgggacctggca
tcaggtaaactgctgtctgaagtgagtcatgctggacctgttaatactgtcgagtttcat
ccaaaggaatttttaatggcaactggcagtaatgatagaacagtaaaattttgggacttg
gaaaaaatttgtttggtttccactacagaacttgagtcaaacccagtgagatccgttttg
tttcattgtgatggacattgtctctttagtggttcaattgattctttaaagctatatggc
tgggaacctgtgagatgttttgatagttgtacagttggttggggaaagatttctgacatg
gtttttgcttctggaaaacttgttgcagcatcattttgtcagactatagcttcaatatgg
gaggttgactttcagaacatcgaagaaatgattgagaattttgaacaactttcaacaaag
aatcatgaaccacatgaagctaagattttgaaccctcctaatcaaatcaaagcaaacgaa
gaaaagaaagttagtcctcagagaaaggtgtttgattcaaaacgacctgcaacaagctca
agcaaagcacgcaaaagtaaactggaacaacctgttgataaaaatcaagtacgccagcaa
ggagtacaccaccctctgattacggagatgtttttacgccaaaatctgttcttgagcgat
caccgattcgatcaagacatctttcgctggcaaatgacaatgaaaatgattccaagtcga
ccttcaaggaacctcttcaacctactgcttctaataaaccagaaaataatgataaaatgg
aaagtttgcagaaagttaccccggaaaagttcagaaaagccatcagaaaaatctgtgata
cataaaagtcaggagacagaggtgacccctgtcgtcaagggaaatgaaaatgaaaaagag
gtttatgtgaaagaaaaacccgatcacattccgtcttctagcaaaccaaagacgttgata
ccatctgaccgcgataaaccagctggactggacatgcacgagtttttaccaggcaacgat
tcacctacgcaaacgaattatcaagattcgcattttgcaccatccataaagattagcgag
gaggagagattagatagcataaggaagggacatatttcttttaccgccgtgttaacgaat
cgtcatcgaaatgtgaacatggtgtggcgactatggaatgatggggatataaagggagct
gtgcaaattgctataaatatgaacgatcaatcaactttggtggactttctcggtgtactc
tgtcttaagcaaactctttggacgctcgatatctgttctgttgtccttccaagtgtgaat
gaattgcttttgagcagatatgaaacctacgttcagaccggtgcgtcaatcatcaaactt
gttctgagaaatttttcccccgttataaagagtaacatggctgctccccccgtctctgtt
ggtgttgatgttgtccgagaggaaaggtttcagaaatgtcagctgtgtcacgcacatttg
ctggcattacgtagtgttatcaaaacgaaagtgaacgtgtctggaagaaatggtagcttg
tttcgtgagttatctctgcttctgtcttccttggattga

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