Xenia sp. Carnegie-2017 (soft corals): 124436970
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Entry
124436970 CDS
T08024
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear valosin-containing protein-like
KO
K14571
ribosome biogenesis ATPase
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124436970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xen03009
]
124436970
Ribosome biogenesis [BR:
xen03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
124436970
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
Nucleolin_bd
AAA_16
AAA_5
AAA_22
AAA_14
AAA_33
TIP49
RNA_helicase
AAA_18
ABC_tran
AAA_2
AAA_25
AAA_28
AAA_17
NPHP3_N
Mg_chelatase
NACHT
nSTAND3
Rad17
TsaE
Viral_helicase1
Zeta_toxin
NB-ARC
nSTAND_NTPase5
IstB_IS21
Parvo_NS1
DUF5906
Vps4_C
Motif
Other DBs
NCBI-GeneID:
124436970
NCBI-ProteinID:
XP_046842918
LinkDB
All DBs
Position
Unknown
AA seq
845 aa
AA seq
DB search
MRKQKAKSCSPKPFRAWTPMSTTKGLFAPRRRGGYTSDVLLLPRLKEFLHGFLWERKPSV
DDAVDYLQKTYRDYSRKKKAPFRTSVQMIYDELKCNEMKLKAEKRKRYDEDDALSDKCSA
AEDTVSFSSDSELSEDEEGDSLCTENLVNCSMHEMYQTSNARISDGKTPSTMVEVETSSP
MEKGYSIHDHLRMSENTPELVIKNDEEKEEKVEKYGSSKDRRRKTRRTSTLSDETKKKSS
VNNNLVESNEIEIPRVPLMKFSDLGGCKNTIQDVCKLLVHIKHPEVFDTLGITPPXGILL
HGPPGCGKSLFAHAIAGELDVPIFNVASTQLISGISGESEGKIRDVFRRAWDHSPCVLFI
DEIDAITPKRENASKEMERRIVAQLLSCLDEMNRNKDVRVLVIGATNRPDSLDPALRRAG
RFDREIRMGIPDERAREEILCVQCKGLKLQEEFDYKSLASQTPGFVGADLTALVREAAMC
AVTRIFNESETGCSENHSMVLRNSTNLTDPNKQKSVMDLFKSSEAIFTENQLKDLCITMD
DFKQALRDVQPSAKREGFATIPDVTWEDVGALEDVREELTMAIIAPVRHREAFNELGLTN
PPGILLAGPPGCGKTLLAKAIANESGINFISVKGPELLNMYVGESERAVRQVFQRARNSA
PCVIFFDELDALCPRRSLSNESTASARVVNQLLTEMDGLETRKQVFIMAATNRPDIIDPA
ILRPGRLDKTLYVGLPQEKDRLAILNTLTKGGSKPRLGNDVDLKAIASDGRCEGFSGADL
SALIREACVNALRDCIKGSQSDENQNGVSAVVFEKHFEGAFEKIKASVSQKEKHVYENML
ERTGK
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaacaaaaagcgaagtcttgctctccgaaaccttttagagcttggactcctatg
agcacgacaaaaggtttgtttgccccaagacgtcgaggagggtatacgagtgatgttctg
ttgcttcccagattaaaagagtttttacatggctttctgtgggaaagaaagccatcagtc
gacgatgctgtcgattacttacaaaaaacatacagagattattcaaggaaaaagaaagct
cctttcaggacaagtgttcaaatgatttacgatgaattgaaatgcaacgagatgaaactg
aaagcagagaaaagaaaacggtatgatgaagacgatgccttgtcagacaaatgtagtgct
gcagaagataccgtgtccttttcatctgattctgagttatctgaagatgaggaaggagat
agtctttgcacggaaaatttggtgaactgctccatgcacgagatgtaccaaacatcaaac
gcgagaatttccgatggcaaaacaccatcgacgatggttgaagtggagacgagttctcca
atggaaaaaggttattccattcacgaccatctccgaatgtccgaaaacacgcccgagcta
gttattaagaatgacgaggaaaaggaagaaaaggttgagaagtatggatcgagtaaagac
agaagacgaaaaacacgtcggacgtcgacgctttcagatgaaacgaagaagaagtccagt
gtgaacaacaatcttgttgaaagcaacgaaatcgaaataccgcgcgttcctctgatgaaa
ttttcagatctcggaggctgtaaaaatacgatccaggatgtttgtaagctgttggtccac
atcaaacatccggaagtatttgacaccctggggatcactcctccgnnagggattttgctc
cacggcccaccaggatgtggaaaatcgttgtttgctcacgccatcgctggcgaactcgac
gtgccgattttcaacgtcgcttcgacccaattgatttctggtatatcaggcgaatccgag
ggcaagattcgtgacgtgtttcgacgcgcgtgggatcattcaccgtgtgtgttgttcatt
gatgaaatcgatgcgataacacctaaacgtgagaacgcatcgaaggaaatggagcgacgt
attgttgcacaattgctttcttgtttggatgaaatgaacagaaacaaggacgttcgtgtg
cttgtgattggtgcaacaaacaggcctgactcccttgatccagctttaagacgcgcagga
aggtttgatcgtgagatacgaatgggcattcctgatgaacgagcaagagaagaaattctt
tgtgtgcagtgcaaaggtctaaaattgcaagaagagttcgattacaagtctttggcaagt
cagacgcccggatttgttggtgctgacctaaccgctcttgtacgagaagcggcaatgtgt
gctgtaaccaggatatttaacgaaagtgaaacaggatgctctgaaaaccattcaatggta
ctacgaaactcgacgaatttgacggaccctaataaacagaaaagtgtcatggatttgttc
aaaagcagtgaagctatttttaccgaaaaccaacttaaagacttatgtattacaatggac
gactttaagcaagcattacgtgatgttcaaccctcagctaagcgtgaaggttttgctaca
atcccagacgtcacgtgggaagatgtcggcgcattagaagatgtcagggaagagttgacg
atggctataatagctcccgtacgtcaccgcgaggctttcaatgaacttggtctgaccaat
ccccccggaatattactggccggaccacctggatgtgggaaaacgttacttgctaaggcc
atcgccaacgaatctgggatcaactttatttccgtgaaaggaccagaacttttgaacatg
tatgtcggtgaaagcgaaagagccgtacgtcaagtgtttcaacgtgcccgcaactcagca
ccatgtgtgatcttctttgacgaactggatgcgctgtgtccacgacgatcgcttagcaac
gagtcgacggctagcgcacgtgttgttaatcagttgttgacggaaatggatggtctggag
acaaggaaacaggttttcatcatggcagcaaccaacagacctgatatcattgatccagct
atattgcgacctgggcgccttgataaaacactttacgttggtttaccgcaagagaaagat
agattagcgatcttgaacactttaacgaagggtggatcgaagccaagacttggcaacgat
gtggatttgaaggcaatcgcttcggatggtcgctgtgaaggattttcaggtgctgatctt
tctgctttgattcgagaagcgtgcgttaacgcattgcgcgactgtattaaaggtagtcaa
tctgacgagaatcaaaacggcgtttccgctgtcgtattcgagaaacattttgaaggagct
tttgaaaagatcaaggcttccgtctcacagaaagaaaaacacgtgtacgaaaacatgctt
gaaagaacaggaaaataa
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