Xenia sp. Carnegie-2017 (soft corals): 124437159
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Entry
124437159 CDS
T08024
Name
(RefSeq) uncharacterized protein LOC124437159
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen04080
Neuroactive ligand-receptor interaction
xen04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124437159
04082 Neuroactive ligand signaling
124437159
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xen04040
]
124437159
Ion channels [BR:
xen04040
]
Ligand-gated channels
GABA-A
124437159
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Pox_VLTF3
Motif
Other DBs
NCBI-GeneID:
124437159
NCBI-ProteinID:
XP_046843123
LinkDB
All DBs
Position
Unknown
AA seq
865 aa
AA seq
DB search
MKLFAIAIFSIVLMNKYVVSLTPPKLNRSELIKYVSADTKIADSILRDYDKRFIPIISGP
LTVKLQIVIANILKIANMEAEIIIFIRQTWYDYRLSWNGTKRIKVREHFLDKIWIPDVRI
RNLKDIKRFPGLGGVNMNIYPDGRVYLSQLVHIEASCSMDLRRFPMDRQTCFLNFSSFAY
GKSQLNFTTSGKKVDVRYYHLPQFELVHATDFLEKSGSKFTVSLTFQRRAGYYILQVYIP
ASFLVVLSWLAFLMESSNITDRLTLEITMILSAVFLLGSINNGVAQVSYTKASDLFVIVS
FAFIFFALLETMLVYRICRLSQKESTKISDVVTSSLDKQLKSCNENLAYDHNKETSVTNS
VDPLRMPAYEENNDTINTNITEKKKSSNVSSLINSISLVLFPLAYIGFNIGYWSYYLMID
VKGDYLSSVLLIKKNKRQTSFARKMKFFVVAIFSFVLMNKFAVSLTPPKLNKSELIKYIS
ADTKIADSILRDYDKRFIPTISDPLTVELQVVIEDILKVANMEAEMIIFIRQIWYDYRLS
WNGTKRIKVREHFLDKIWIPDVRITSLKEIKQFPGLGGVNMNIYPNGRVYLSKLIHIRIN
CPMYLQRFPIDWQTCLLNFKSYAYDNSKLNFTTSSKKVEVRHHHLSQFEFVGSKKILKNK
GNISTFTVFLKFRRRVGHYILQGFLPATFLVVLSWLAFLIKSSNISDRLTLEITIILSTV
VLLDNNNDKIVQVSYVKALDLFIIVCFGFIFVALLETMLVYRLWILAQRESTKTSDVVAS
SLDKKLKPPNKHPPREDEKKITVNNNFSDPLQISSYEENNGTINIKTTEQKKSSSASCLM
DKISLVLFPLVFIGFNIGYWYHFLS
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatttgcgatagcaatattctctatcgtgttgatgaacaaatacgttgtgtcg
ttgactccaccaaaattaaacagatcggagctgatcaagtatgtaagtgctgatacaaaa
attgcagacagtatcttgcgtgactacgataaacgttttataccaattatatcaggtcct
ttgacagtgaaactccaaattgtgatagcaaatattcttaaaatagccaacatggaggct
gagataattatctttataagacaaacatggtatgattatcgactctcgtggaatggaacg
aagaggataaaagttcgagaacactttttagataaaatatggattccagatgttcgcatc
agaaatttaaaagacattaaacgattcccaggactcggtggagtaaacatgaacatttat
ccagacggtcgagtgtatttaagtcaattagttcacatagaagcaagctgttctatggat
ttgcgtagatttccaatggacaggcaaacttgttttctcaatttttcgtctttcgcctat
ggaaagtcacagctaaactttacaacgtcagggaagaaggttgacgtacgctactatcac
cttccacagtttgagttggttcatgctacagactttctggaaaaaagtggaagcaagttc
acagtttccctcacttttcaacgacgtgcaggttattatatacttcaagtgtatataccg
gcttcatttcttgtcgtactttcatggcttgcatttctcatggaatcgtcaaatatcacg
gatcgtcttacattggagatcaccatgattctgtcggccgtttttctcctcggcagtatc
aataatggtgttgctcaggtgtcctacacaaaggcttcggatctgtttgtcatcgtaagc
tttgcttttattttttttgcattattggaaacaatgttggtctatcgcatttgtcggctg
tctcagaaagaatcaacgaaaattagtgacgtcgttacaagctcacttgataagcagcta
aaatcgtgcaacgaaaacctcgcctatgatcataataaagaaacttctgtgaccaactct
gttgatccacttcgaatgccagcttatgaagagaacaacgataccataaacaccaacata
acggagaaaaagaaatcatcaaatgtttcatctttgatcaatagcatcagtttggtttta
ttcccccttgcatacattggattcaacattggatattggagctattatctaatgatcgat
gttaaaggcgattatttatcttctgttttgctgataaagaaaaacaaacgccaaacgtct
tttgcacgaaagatgaagttttttgtggtagcaatattctctttcgtgttgatgaacaag
ttcgctgtctcgttgactccaccaaaattaaacaaatcagagctaatcaagtatataagt
gctgatacaaaaatcgctgacagtatcttgcgtgactacgataaacgctttataccaacg
atatcagatccgttgacagtggaactccaagttgtgatagaagacattcttaaagtagcc
aacatggaggctgagatgattatctttataagacaaatatggtatgattatcgactctca
tggaatggaacgaagagaataaaagtcagagaacactttttagataaaatatggattcca
gatgttcgcatcacgagtttaaaagaaattaagcaatttccaggactcggtggagtaaat
atgaacatttatcccaacgggagagtgtatttaagtaaattaatccacattagaataaat
tgtccaatgtatctacaaagatttccaatcgactggcaaacttgccttctcaatttcaaa
tcttacgcttatgataattcaaagctaaactttacaacgtcatcaaaaaaggtcgaagta
cgtcatcatcacctttcgcagtttgagtttgttggctccaaaaagatcctgaaaaacaaa
ggcaatatttcaacgtttacagtttttctgaaatttcgaagacgtgtgggacactacata
cttcaaggttttttaccggctacatttcttgtcgtactttcatggcttgcctttcttatt
aagtcgtcaaatatctcggatcgtcttacattggagatcacgataattttgtccaccgtt
gttcttctcgacaacaacaacgataaaattgttcaggtgtcctacgtcaaggctcttgat
ttgttcatcatcgtttgttttggtttcatcttcgtcgccttattggaaacaatgttggtg
tatagactttggattctggcccagagagaatcaacgaaaactagtgacgttgttgctagt
tcccttgacaagaagctaaagcctcccaacaaacacccaccacgtgaggatgagaaaaaa
atcaccgtgaacaacaacttcagcgatccacttcaaatctcatcttatgaagagaacaat
ggtaccataaacatcaaaacaacagaacaaaaaaaatcgtccagtgcttcatgtttgatg
gacaaaatcagcttggtgttgttccccctcgtattcataggattcaacattggatactgg
taccattttcttagttaa
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