Xenia sp. Carnegie-2017 (soft corals): 124437573
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Entry
124437573 CDS
T08024
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear valosin-containing protein-like
KO
K14571
ribosome biogenesis ATPase
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124437573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xen03009
]
124437573
Ribosome biogenesis [BR:
xen03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
124437573
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_5
AAA_22
AAA_14
TIP49
AAA_33
RNA_helicase
AAA_2
NPHP3_N
AAA_18
AAA_25
AAA_17
ABC_tran
NACHT
Mg_chelatase
AAA_28
nSTAND3
Rad17
TsaE
ATPase
Viral_helicase1
nSTAND_NTPase5
NB-ARC
Zeta_toxin
IstB_IS21
DUF5906
Parvo_NS1
Vps4_C
DUF4543
Motif
Other DBs
NCBI-GeneID:
124437573
NCBI-ProteinID:
XP_046843499
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MHEMYQTSNARISDGKTPSTMVEVETSSPMEKGYSIHDHLRMSENTPELVIKNGEEKVEK
YGSSKDRRRKTRQTSTLSNETKKKSSVNNNLVESNEIEIPRVPLMKFSDLGGCXNTIQDV
CKLLVHIKHPEVFDTLGITPPRGFLLHGPPGCGKSLFAHAIAGELDVPIFNVASTQLISG
ISGESEGKIRDVFRRAWDHSPCVLFIDEIDAITPKRENASKEMERRIVAQLLSCLDEMNR
NKDVRVLVIGATNRPDSLDPALRRAGRFDREIRMGIPDERAREEILCVQCKGLKLQEEFD
YKSLASQTPGFVGADLTALVREAAMCAVTRIFNESKTGCSENHSMVLRNSTDLTDANKQK
SVMDLFKSSEAIFTEKQLKDLCITMDDFKQALRDVQPSAKREGFATIPDVTWEDVGALED
VREELTMAIIAPVRHREAFNELGLTNPPGILLAGPPGCGKTLLAKAIANESGINFISVKG
PELLNMYVGESERAVRQVFQRARNSAPCVIFFDELDALCPRRSLSNESTASARVVNQLLT
EMDGLETRKQVFIMAATNRPDIIDPAILRPGRLDKTLYVGLPQEKDRLAILNTLTKGGSK
PRLGNDVDLKAIASDGRCEGFSGADLAALIREACVNALRDCIKGCQYDENGVSAVVFEKH
FEGAFEKIKASVSQKEKHVYENMLERTGK
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgcacgagatgtaccaaacatcaaacgcgagaatttccgatggcaaaacaccatcgacg
atggttgaagtggagacgagttctccaatggaaaaaggttattctattcacgaccatctc
cgaatgtccgaaaacacgcccgagctagttattaagaatggcgaagaaaaggttgagaag
tatggatcgagtaaagacagaagacgaaaaacacgtcagacgtcgacgctttcaaatgaa
acgaagaagaagtccagtgtgaacaacaatcttgttgaaagcaacgaaatcgaaataccg
cgcgttcctctgatgaaattttcagatctcggaggctgtnaaaatacgatccaggatgtt
tgtaagctgttggtccacatcaaacatccggaagtatttgacaccctggggatcactcct
ccgaggggatttttgctccacggcccaccaggatgtggaaaatcgttgtttgctcacgcc
atcgctggcgaactcgacgtgccgattttcaacgtcgcttcgacccaattgatttctggt
atatcaggcgaatccgagggcaagattcgtgacgtgtttcgacgcgcgtgggatcattca
ccgtgtgtgttgttcattgatgaaatcgatgcgataacacctaaacgtgagaacgcatcg
aaggaaatggagcgacgtattgttgcacaattgctttcttgtttggatgaaatgaacaga
aacaaggacgttcgtgtgcttgtgattggtgcaacaaacaggcctgactcccttgatcca
gctttaagacgcgcaggaaggtttgatcgtgagatacgaatgggcattcctgatgaacga
gcaagagaagaaattctttgtgtgcagtgcaaaggtctaaaattgcaagaagagttcgat
tacaagtctttggcaagtcagacgcccggatttgttggtgctgacctaaccgctcttgta
cgagaagcggcaatgtgtgctgtaaccagaatatttaacgaaagtaaaacaggatgttct
gaaaaccattcaatggtactacgaaactcgacggatttgacagatgctaataaacagaaa
agtgtcatggatttgttcaaaagcagtgaagctatttttaccgaaaaacaacttaaagac
ttatgtattacaatggacgactttaagcaagccttacgtgatgttcaaccctcagctaag
cgtgaaggttttgctacaatcccagacgtcacgtgggaagatgtcggcgcattggaagat
gtcagggaagagttgacgatggctataatagctcccgtacgtcaccgcgaggctttcaat
gaacttggtctgaccaatccccccggaatattactggccggaccacctggatgtgggaaa
acgttacttgctaaggccatcgccaacgaatctgggatcaactttatttctgtgaaagga
ccagaacttttgaacatgtatgtcggtgaaagcgaaagagccgtacgtcaagtgtttcaa
cgtgcccgcaactcggcaccatgtgtgatcttctttgacgaactggatgcgctgtgtcca
cgacgatcgcttagcaacgagtcgacggctagcgcacgtgttgttaatcagttgttgacg
gaaatggatggtctggagacaaggaaacaggttttcatcatggcagcaaccaacagacct
gatatcattgatccagctatattgcgacctgggcgacttgataaaacactttacgttggt
ttaccgcaagagaaagatagattagcgatcttgaacactttaacgaagggtggatcgaag
ccaagacttggcaacgatgtggatttgaaggcaatcgcttcggatggtcgctgtgaagga
ttttcaggtgctgatcttgctgctttgattcgagaagcgtgcgttaacgcattgcgcgac
tgtattaaaggttgtcaatatgacgaaaacggcgtttccgctgtcgtattcgagaaacat
ttcgagggagcttttgaaaagatcaaggcttccgtctcacagaaagaaaaacacgtgtac
gaaaacatgcttgaaagaacaggaaaataa
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