Xenia sp. Carnegie-2017 (soft corals): 124437645
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Entry
124437645 CDS
T08024
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71-like
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xen03019
]
124437645
04121 Ubiquitin system [BR:
xen04121
]
124437645
Enzymes [BR:
xen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124437645
Messenger RNA biogenesis [BR:
xen03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124437645
Ubiquitin system [BR:
xen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124437645
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
Vgb_lyase
zf-RING_2
zf-RING_5
zf-C3HC4_2
ANCHR-like_BBOX
Neurexophilin
DUF5711
Baculo_PEP_C
HTH_12
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
124437645
NCBI-ProteinID:
XP_046843568
LinkDB
All DBs
Position
Unknown
AA seq
771 aa
AA seq
DB search
MRFQYNDMAFASNRPAKLPLCPGCGRPFEAPKILPCLHTFCRRCLMEAIETNPTKSLSCL
TCYRHVELNENGVDGLRANMFIENIMDIISPHHEYEARERGNTSTNARTNLASHICSNCE
EGLQVTSHCRVCNEDLCDNCTQAHQRVRMTKDHEILPLPAQDDTTTHETVNKRSPEHNER
CLTHKDELLILYCDTCYSPVCRECTLNEHLGHSFIYLQDAVTNNVSSLHKLITEAGRESS
AIDECIAASRAMSERVQVQAQNIASEIRNTVRRHMTALEERERQLLRRVEKIGQVKGKIL
HIQIDELKTSVAGLNNALDAAHKALEHDKEDEIKSAKKSLTDSLNGLRVKRDLMKVHEDD
SIGFSPPDPALQTAIRSLGIVSSNACAMYSVIHGNSHKRAIRSKSAMFIVQARDHHGENR
CTGGDVPHVTIQTPDGLLLRGEVFDRQNGTYAVTYRPQVEGSHIVSVAIRGLQIKDCPFH
VDVKKGRNYQTIGVPVSCFGTEGEGDGELCRPWGVSCTQDGNIIVADRSNNRIQVFNRQG
RFLYKFGSAGSRNGQFDRPAGVTCSMQGHIIVADKDNHRVQVFETDGTFVLKFGERGNKN
GQFHYPWDVAVNTEGQILVSDTRNHRVQLFSSDGSFVNKYGFEGSLWKHFDSPRGVAFNH
EGQMVVTDFNNHRLLVIGTDFQSARFLGTEGVNNGQFLRPQGVAIDEEGNIVVADSRNHR
IQIFQAHGVFCCKFGSPGSNPGQLDRPSGICITPDGCIVVVDFGNNRIQIF
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgagatttcaatataatgacatggcatttgcttcaaatcggccggctaaactgcccttg
tgccctggctgtggcagaccgttcgaagctcctaagattttgccttgtttacacacgttt
tgccgtaggtgtctgatggaagccatcgaaacaaatcccacgaagtcgctctcgtgttta
acttgttaccggcatgtggagttgaacgagaacggtgtagatggcttacgtgcaaacatg
tttattgagaatatcatggatatcatttcgccacatcatgaatatgaagccagagaaaga
ggtaatacttcaacaaatgctagaacaaatctcgcttctcatatatgtagtaactgcgag
gaaggattacaagtgacatcacattgtcgagtttgtaacgaagatttgtgtgacaattgc
acacaggctcatcaacgcgtacgtatgactaaggaccatgaaatattacctctccctgct
caagatgatactacgacacacgaaacagtgaataaacgcagtcccgaacacaacgaacgt
tgtcttacacataaagatgaattacttattctatattgtgacacttgttactctccagtg
tgccgcgagtgcaccttaaatgaacatctcggccatagtttcatctatttgcaagatgct
gtgacaaataacgtgagttctctgcataaacttataactgaagctggtcgagagagtagt
gctatagacgaatgcatagctgcatcccgtgctatgagtgaacgagtgcaagttcaagcc
caaaacatagctagcgaaatccgtaacacagtacgaagacatatgactgcattagaagag
agagaacgtcaattattacgacgtgtggagaagattggccaagtgaaagggaaaatatta
catattcagatagacgagttgaaaacaagtgtagctggtttaaataatgccctcgatgca
gctcataaagctttggaacatgacaaagaagacgaaattaaatcggcaaaaaaatctttg
acagatagtctgaatgggcttcgagtaaaacgcgacctcatgaaagtacacgaggatgat
tctatcggttttagtccacccgatcccgcattacagacggccattagatcacttggcata
gtgagtagtaatgcatgtgctatgtatagtgtaatccatggaaacagtcacaagcgagcg
attcgcagtaaatcggcaatgtttatcgtccaagcaagagatcatcatggtgaaaatcgt
tgcacgggcggtgatgttccacatgtaaccatacaaacacctgatggtctattattacgt
ggtgaagttttcgaccggcaaaatggcacctatgctgtcacatatcgtcctcaggttgaa
ggttcgcatattgtttctgttgcaatacgcggtctacaaatcaaggattgccctttccat
gttgacgttaaaaaaggacgaaattaccaaactatcggtgttcctgttagctgttttggt
actgagggtgaaggtgacggtgagctgtgtcgaccatggggtgtaagttgtactcaagac
ggaaatattatagttgctgatcgaagtaataatcgtattcaagtgttcaatcgtcaagga
cgttttctttacaagttcggatctgctgggtctcgtaatggtcaatttgacagacccgct
ggcgtgacatgcagtatgcaaggccatattattgtcgctgacaaagataaccatcgagta
caggtgtttgaaactgatggtacatttgtgttgaagtttggtgaacgagggaataaaaac
gggcagtttcattatccatgggatgtagcagtgaacacggaagggcagattcttgtctca
gatacacgaaatcatcgcgtccagttgtttagctctgatggatctttcgtgaacaaatat
ggctttgaaggctccctttggaagcattttgattccccacgtggtgttgcttttaatcac
gaaggacaaatggtcgtcacagatttcaataaccatcgcttgctcgtcatcggtacagat
tttcagtcagctagatttctcggcaccgaaggagtgaataatggtcaatttttacggcca
caaggagttgctatcgatgaagaaggcaacatagttgtcgcagactcaagaaatcaccgc
atacagatctttcaagcgcatggtgttttctgttgtaagtttggctcgcccggatcaaat
cctggccagttagatcggccttcaggtatttgtatcacaccagatggatgcattgttgtc
gtagattttggcaataatcgcattcaaattttctag
DBGET
integrated database retrieval system
