Xenia sp. Carnegie-2017 (soft corals): 124437710
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Entry
124437710 CDS
T08024
Name
(RefSeq) transcription activator BRG1-like
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124437710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xen03021
]
124437710
03036 Chromosome and associated proteins [BR:
xen03036
]
124437710
Transcription machinery [BR:
xen03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124437710
Chromosome and associated proteins [BR:
xen03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
124437710
Chromatin remodeling factors
BAF complex
124437710
PBAF complex
124437710
GBAF(ncBAF) complex
124437710
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
HSA
SnAC
BRK
ResIII
QLQ
HDA2-3
DEAD
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
124437710
NCBI-ProteinID:
XP_046843630
LinkDB
All DBs
Position
Unknown
AA seq
1464 aa
AA seq
DB search
MMPSRDPGLQRPPQFTYTPENMQRLGKAIQSMQEKGMESDPRYSTLLSLARNAQQMQHLP
GFPSDSSGSSNISNMMPASGQMGLTSTNEGFLDDDGSSLQGKTNGGLTADQINQLRSQIV
AYKMLSHNQPLTDQIKMAIQSKGGTPSQLASAQPTQAEISAVSESTTKESGIWCASSGNA
STSSSIPTSQPQGKEDEQKPQVSQASQSSATQSSTRPATASQILATIQNPARSRLAPVAK
PTGLDPVAILRERKGRIQARITMRIRELEGIPLKALAEDLRLQATIELKALRLLNFQKQL
RADVVSSTRQDTTLETALNSKAYKRNKKQSLREARITEKLEKQQKIEQERKRRLKHQDYL
NSVMVHAREFREFHRTNVSKIAKLNKAVMNYHANSDRERKKEEERLEKERMRRLMEEDEE
GYRKLIDQKKDRRLAYLLDQTDEYISNLTQLVKKHRKDIKRKKREHRKKREEEVDETGEI
IEKMDPEDHVAVVNTETGEMLTGSNAPTASQIEEWLAQNLNYQVAPRQEDSDNEDDVDEE
DEEEEEEGGESVKKNNEDKTEEERRKEEYGAEDDIESTTVYESKNYYNIAHELKEDVKQQ
PSILVGGTLKEYQLSGLEWMVSLHNNNLNGILADEMGLGKTIQTIALLSYLLEKKKIMGP
FLVIVPLSTLSNWTLEFGKWCPSIISICYKGSPNCRRSLANQIRTGKFNVVLTTYEYVMK
DKAVLAKVRWKYMIIDEGHRMKNHHCKLTQILNTYYSAPHRLLLTGTPLQNRLPEMWALL
NFLLPSIFKSCNTFDQWFNAPFAMTGEKVELNEEETLLIIRRLHKVLRPFLLRRLKKEVE
SQLPEKTEYVIKCDMSDLQKLLYQHMYKKGVLLTDGSEKDKKGRGGAKTLMNTIMQLRKI
CNHPFVFQHIEESMAEHLGFTGGLVQGQELVRCAGKFELLDRIMMKLIRTKHKVLLFCQM
TSLMTVMEDYFNYKGIRYLRLDGTTKAEDRGHLLQLFNAPNSIYNVFLLSTRAGGLGLNL
QVADTVVIFDSDWNPHQDQQAQDRAHRIGQTNEVRVLRLVTVNSVEETILAAARYKLNID
EKVIQAGMFNQNSTSGERRAFLEALLENDKDDEEEENEIPDDETVNQMIARNIEEFDLFQ
KMDHERKLREVKCGGKPRLMRRDELPGWILKDDAEVERLTNEDEEEKLFGRGSRQKKTVD
YSEPLTERQWLKAIEDGCLDEMEERKKTKKARKRKRLEDGGETSGQKSSKKKRGRPAVDR
VKMPPIPADLKKKMKKIVKYIVHYRDDDDRPLADIFTVLPSKKDLPDYYQVIKQPVDIKK
LRCRINSHRYRSMDDLQADFMLMCRNAQTYNIEGSIIYDDSIALQSLFLHVREKVEIGEE
LVINKSVASDREEEDEDEVEDQGEEESDGSDDDTTLSSLKMRIKINKEEKAKKKQGHFKK
VGESASQQEDNSEMESAGESESST
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atgatgccatcaagagatccaggcttacaaagacctcctcaatttacttatactcctgag
aatatgcaacgtctgggaaaggcaattcaatctatgcaggagaaaggaatggaatcagat
cctcgctatagtactctattatcacttgcacgtaatgcccagcaaatgcagcatttacca
ggattccctagtgactctagtggcagctcaaatattagcaatatgatgccagcatctgga
cagatgggactaacttcaacaaatgaaggtttccttgatgatgatggttcttctcttcaa
ggaaagaccaatggaggacttactgctgatcaaattaatcaattgcgcagtcaaattgtg
gcgtacaaaatgctctcacataatcagcctctcacagatcaaatcaaaatggcaattcaa
agtaaaggtggtacgccatcacagttagccagtgctcaaccaacacaagcagaaatttca
gctgtgtctgaaagcacaaccaaagaatctggtatttggtgtgcatcatcaggtaatgca
agtacaagcagttctattccaacatctcaaccacaaggcaaagaagatgaacagaaacct
caggtttctcaagctagtcagtcatctgcaactcaaagctcaactagacctgctacagct
tcacaaatcttagcaactattcaaaatcctgctcggtctcgattggctcccgttgctaaa
ccaacaggattggatccagttgccatactgcgtgaaaggaaaggtagaattcaagctcgt
ataactatgcgcattcgtgagttggaaggtattccattaaaggctttggcagaggatcta
agactgcaagcaaccatcgaattaaaagcattacgacttttaaactttcaaaaacagtta
cgtgctgacgttgtatcatcaacacgccaagacacgactttagaaactgctctaaactcg
aaggcctacaaacgaaacaaaaaacaatctctacgtgaagcaaggataacggaaaaactg
gaaaagcaacaaaagattgaacaagaacgtaaacgaagattgaagcatcaagattatcta
aattcggtgatggttcatgctcgcgaatttcgagaatttcatcgaacaaatgtttctaag
attgccaaacttaacaaagccgtgatgaattatcatgcgaacagcgaccgagagagaaag
aaggaggaagagagattagaaaaagaaagaatgagaagacttatggaagaagacgaagaa
ggttatcgcaaactcattgatcaaaagaaagacaggcgtctggcatatcttctcgatcag
acagatgaatacatcagcaatttgactcaactcgtaaaaaagcacaggaaagatatcaag
agaaagaaaagagagcatcgtaaaaaacgcgaggaagaagtcgatgaaacaggggaaatt
attgaaaaaatggatcctgaagatcacgtggccgtcgtcaatacggaaacgggtgaaatg
ttgaccggaagtaatgcaccaacagctagtcagattgaagaatggttggcgcagaatctt
aactatcaagttgcaccacgtcaagaagattctgacaatgaagatgatgtcgatgaagaa
gatgaggaagaagaagaagagggcggtgaaagtgttaagaaaaataatgaagataaaact
gaggaagagagaagaaaagaagaatacggagctgaagatgatatcgagagtacaacggtt
tatgaaagtaaaaattactacaacattgctcatgagcttaaagaagatgtgaaacaacaa
ccaagtattttggttggaggaacacttaaggaatatcagctgagtggtttggagtggatg
gtatctttacacaataacaacttaaatggtatacttgctgatgagatgggactgggaaag
accattcaaaccatcgctttactttcttatttacttgaaaagaagaaaattatgggacca
tttttggtcattgtgcctttgtcgacgttgtctaactggacgttggagtttggaaaatgg
tgtccatcaattatttccatctgttataagggctcacctaattgtcgacgatccctcgcc
aaccaaataaggactggaaaatttaacgttgttcttacgacatatgaatacgttatgaaa
gataaagccgttcttgctaaggttcgttggaaatacatgataattgacgaaggtcacaga
atgaaaaatcatcattgtaaattgacacaaattttaaatacgtattactcagctcctcat
cgccttcttttgactggaacacctttacagaaccgtcttcctgagatgtgggctttgctt
aactttttgctaccatccatctttaaatcttgtaacacatttgatcaatggtttaatgca
ccttttgctatgaccggggaaaaggttgagttgaacgaggaagaaacattgttgataata
cgacgtctgcacaaagttttacgtcctttcttattgcgtcgtttgaaaaaagaagttgaa
tcacagttgcccgagaagacggaatatgttattaaatgcgatatgtctgacctacagaag
cttttgtaccaacatatgtataagaaaggagttcttttaactgacggctccgagaaggat
aaaaagggtcgtggaggtgctaaaacattgatgaatactatcatgcaacttaggaagata
tgtaaccatccatttgtctttcaacatattgaggagtctatggctgaacatttaggtttc
actggaggactggtacagggacaagaactagtgcgttgtgctggcaaatttgaacttctt
gatcgtattatgatgaaactaattcgcactaaacacaaagttttgttattttgtcaaatg
acatccctcatgaccgtaatggaagattatttcaactataaaggtatcagataccttcgt
ttggatggaacaacgaaggcagaagatcgtggacatctattgcaattattcaatgcgccc
aattcaatatataatgtctttcttctgagtacaagagccggaggtctgggacttaatcta
caagttgctgacactgtggttatttttgacagtgattggaatcctcaccaggatcagcaa
gctcaggatcgagcccatcgtattggtcaaacaaatgaagtgagagtattaagattggtg
actgttaacagtgtagaagaaaccatccttgctgcagctcgatataaacttaacattgat
gaaaaagtcatccaagcaggcatgtttaatcaaaattcaacatcaggtgaacggagggct
ttccttgaagcattgttggaaaacgataaagatgatgaagaagaggaaaatgaaatcccg
gatgacgagactgttaatcagatgattgcaagaaatattgaagaatttgatctctttcag
aaaatggaccatgaaaggaaacttcgggaagtgaagtgtggtggcaagcctcgattgatg
cgtcgtgatgaacttcctggttggatccttaaagatgacgctgaggttgaaagactaacc
aatgaagatgaagaggaaaaattgtttggacgtggtagtcgtcaaaaaaagacagtggat
tatagtgaaccattaaccgaacgacaatggcttaaggctattgaagatggctgtctggac
gaaatggaagaaaggaaaaagacgaaaaaagccagaaaacgtaaacgtctagaagatggt
ggagaaacttctggtcaaaagtcgtccaagaaaaagcgaggtcgaccggcggttgataga
gttaaaatgccgcccattcctgctgatttaaagaaaaaaatgaaaaaaattgtgaagtac
attgttcattatcgagacgatgatgatcgcccattggctgacatctttaccgtactacct
tcaaagaaagaccttccagattattatcaagttatcaaacaacccgttgatattaaaaaa
ttaaggtgtcgaatcaacagtcatcgctatcgttccatggatgatcttcaagcagatttt
atgttaatgtgtcgaaacgctcaaacttataatattgaaggctccatcatttatgatgat
tcgatcgctttacagtctctattccttcatgtccgtgagaaagttgaaattggagaagaa
ctggtgataaataaatcagtggccagtgatagagaagaagaagatgaagatgaggtcgag
gatcaaggtgaagaagaaagcgatggttcggatgatgatacgacattgtcatcattaaaa
atgagaattaagataaacaaagaggaaaaggccaaaaagaaacaaggtcatttcaaaaaa
gtgggcgaaagcgcttctcaacaggaagacaattctgagatggaatccgctggcgaatca
gaaagttctacatga
DBGET
integrated database retrieval system
