Xenia sp. Carnegie-2017 (soft corals): 124437726
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Entry
124437726 CDS
T08024
Name
(RefSeq) LOW QUALITY PROTEIN: low-density lipoprotein receptor-related protein 4-like
KO
K20053
very low-density lipoprotein receptor
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xen04131
]
124437726
Membrane trafficking [BR:
xen04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
124437726
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
DAG1
Adeno_E3_CR2
DUF6377
Motif
Other DBs
NCBI-GeneID:
124437726
NCBI-ProteinID:
XP_046843631
LinkDB
All DBs
Position
Unknown
AA seq
931 aa
AA seq
DB search
MLLKCSALTCDNKGDCKCNAASVDGKYKTILEKFICDGDPDCDDNSDELNCATRNCKDDE
HKCGNGRCIKKNWFCDNYADCKDESDESPLRCNFTTCKSDQIRCNNGVCLPNSFKCDRTT
DCLHGEDERNCDFYRNCSTSEFQCNNKKCVSKKYVCDGGDDCDDNSDEANCKTCSSNSFS
CSSGDQCIPKNLKCNGKNDCKDGSDEQSCPTVSKPHLFQSELFCDGECKLVFKCDGENDC
DDGADEKNCDAIKCAISTEVLCDDGKSCVMNYKFCDGKNDCLDGSDEKSSRCDKTDIIKT
VSCDADDYQCMNSSSCINSSQLCDKKKDCPLGDDEHSCLRSVSCAADEYLCRNSSSCINN
SQLCDKKKDCPLGEDEQSCLINECDYNNGNCTHNCHDTKTSYYCSCKNGFKLSKDNRSCI
DINECEIIGECSQTCLNAAGSFKCLCTKGYILSGDERDCIPGTGKRAELVVAAGLDIRSI
TTDGSHLKRFVEESTKNAVAVDLFLAKRFMFWADAFLNKIFRSNFDTSIAKPLVVATING
LKDLAVDWITGKLYWLSTYLQSSYFDVAELDGSNRKTILILKIDIHSIVLNPLKGYIYWS
CITTPKISRANMNGKNIEDIVTNSIRAPTGLTIDYAIEKLFWLDTKKHEIESSDLDGRNR
RPLNIGNLQDLFDIAVFGKYIYWTDHIKKTLSAANKFTGQNKSILIYNEKIPSFVPKRLS
VRHSLSQPSGFNPCNKDNGGCSHLCLIVPNGFNCTCPNNGSLLNDGKSCKMAMSVKSTEF
ASTSTPTSEEYSQSSETTAVHLLVTLGATAAQRKSHKNDSTIQIIFITTACVVACLVIII
VAMICYRKKKNANKMEIHYISGAGDVKIFAPEDRNPTNSKKDAYMKFESKNFEDWTEDED
GDHFDDQQESQREYKTFFRIGDKERLVAEAV
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgcttctaaaatgttcagctttgacttgtgataataaaggcgactgcaaatgtaatgcg
gctagcgtcgatggaaaatataaaaccatactcgagaaattcatctgcgatggcgatcca
gattgtgacgacaatagtgatgagttgaattgtgccactaggaactgcaaagatgatgag
cataaatgtggtaatggtcgctgtattaaaaagaattggttttgtgacaattatgcagat
tgtaaagatgagagtgatgagtcaccacttcgatgcaacttcacaacctgtaaatctgat
cagattcgatgcaacaatggtgtctgtttgcccaactcttttaaatgtgataggactaca
gattgcttacatggtgaagatgagcgcaattgtgatttttaccgaaattgttccaccagt
gaatttcaatgtaataacaaaaaatgtgtcagtaagaaatatgtttgtgatggtggtgat
gattgtgatgataactctgatgaagctaattgcaaaacatgcagttcaaactcattctca
tgttcgtctggagatcagtgtattccaaagaatcttaaatgtaatgggaaaaatgactgt
aaagatggttctgatgagcaatcctgtccaactgtgagtaaaccccacttgtttcaaagt
gaattattctgtgatggtgaatgcaagcttgtcttcaaatgtgatggtgaaaatgattgc
gatgatggtgctgatgagaagaactgtgatgccattaaatgtgcaataagcacggaagtt
ttatgtgatgatggcaaatcttgtgttatgaattacaaattttgtgatggtaaaaatgat
tgtcttgatggaagtgacgagaagtcttcaagatgtgataaaacagatataataaagact
gtttcttgtgatgccgacgattatcaatgtatgaattcttcatcatgcattaatagcagt
cagttatgtgataagaagaaggattgtccattaggagacgatgagcactcttgcttaagg
agtgtttcttgtgctgctgatgaatacctatgtaggaattcttcatcgtgtattaacaac
agtcagttatgtgataagaagaaggattgtcctttaggagaagatgaacagtcttgctta
ataaacgaatgtgactacaacaacggaaactgtactcacaattgtcatgatactaaaaca
agctattattgctcttgcaagaacggattcaaattgtcaaaagataatagaagctgtata
gacattaacgaatgtgaaattattggcgaatgcagtcagacttgtttaaacgctgctggc
tcttttaaatgtttatgcacgaaaggttatattctttcgggtgatgaacgagactgcatt
ccggggacaggaaaaagagcagagttagttgttgcagctgggttggatatacgaagtata
acgactgatggctcacacttgaaacgttttgtagaagaaagcactaaaaatgcagttgca
gttgatttatttcttgcaaaacgtttcatgttttgggctgatgccttcttaaacaagata
ttccgttccaattttgatacaagcattgcaaagccactcgttgttgcgacaatcaatgga
ttgaaggatctggccgttgattggataacaggaaaactttactggttatcaacatatctg
caaagctcatacttcgatgtagctgaattagatggatccaacaggaaaacaattttgatt
ttaaaaatcgatattcacagtattgttctcaatccactcaaaggatacatttactggagt
tgtatcactaccccaaagatatccagagctaacatgaatgggaagaatatagaggacatt
gtaacaaattcaattagagcccccactggtttgaccattgattatgctattgagaaatta
ttttggttggatacgaaaaaacacgaaattgaatcaagtgatttggacggccgaaatcgt
cgacctctcaacattgggaatcttcaagatttgtttgatattgctgtgtttggtaaatat
atttactggacagatcacatcaagaaaactctctccgccgcgaataaatttaccggacaa
aataaatcaatattaatctacaatgagaaaattcctagttttgtgcccaaaaggctttca
gttcgtcattctctctctcaaccatcaggctttaatccatgtaacaaagataacggtgga
tgtagccatttatgtttgattgttcccaatggcttcaactgtacatgtcctaataatggc
tcgttattgaatgacggaaagagttgcaaaatggctatgtcagtcaaatccacagaattt
gcatcaacatcaactccaacgtctgaagagtattcgcaaagttcagaaacaacagcagtg
catttgttagttacacttggcgctactgctgcacagcggaaatcacataaaaatgattca
actattcaaattattttcattacaacggcttgtgttgtagcctgtcttgtgatcatcatt
gttgctatgatttgttatcgtaagaagaaaaatgctaataaaatggagatacattacatc
tcgggcgctggcgatgttaagatatttgcacccgaagaccgaaatccaactaatagtaag
aaagatgcatatatgaaatttgaaagtaaaaattttgaagattggactgaagatgaggac
ggcgatcattttgatgaccaacaagaaagtcaaagagaatacaaaacatttttccgaata
ggtgataaggagcggctagttgctgaggccgtgtag
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