Xenia sp. Carnegie-2017 (soft corals): 124437854
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Entry
124437854 CDS
T08024
Name
(RefSeq) nuclear pore complex protein Nup153-like isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03013
Nucleocytoplasmic transport
xen03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124437854
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124437854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xen03019
]
124437854
Messenger RNA biogenesis [BR:
xen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124437854
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
124437854
NCBI-ProteinID:
XP_046843745
LinkDB
All DBs
Position
Unknown
AA seq
1620 aa
AA seq
DB search
MVDQPNQKSYKIRGHSRQRRSSKPYLRPNEAKNKGIFDKVKEYFNPSWLVGYFSSSKDDS
EEYERNLDSHATVTHEEGSASNVREPIQHASSYVAEEDENEDSFESFENDSEQSLNEDDM
NDDLTVHDKNDRREKLDNRDHSIRLSGSLDDDFEDAKERQKRTVFDSSDRIFQRTDHLTR
KPLPSLLHSRAASSSLLLQRGMHGIRNKGNLFSANSGGSTTSRMKFSSTPITAHDTGESS
ANLVNDKLARHSLSARNLSINDRMSTRNETPKMASVPEDKPSRTSSLPALSTTNSTPLFS
VEKFVTPVQRSFKNKRVGSPNYPGPVIYGGALNVSREIPFKRRKMSTSPGSESHHPVSKL
RIRGVKQLSTQSAAAGRSSTKTAQRILDALESVSSPLKDVRRIPAPISLASASPLSFIPS
KTRTIPPKTKVGPRVSYLQAKLIGDPPVSSLQTPDVAKVSFVEEPRESTEVQSDPSPSTT
RRPSNPRSQDSTFFSDLNDVVLKTSLPGSLAPKSLPTSLSPIENTKKSGGKMKSAPRREA
MHYSSNKNSPESEVANPLPEINNAIPLPVNLNKNLSFPMFNSSKTLHSNNDVARKSFIDD
KQKKPPSCERQESPRNGFLFSSPETESRKFSVKECLETADNEVSFSFSEPAPVKVSGNKK
PSRSSSLQSSKSAPLLYTSPTQNSVSLFSKSPQSDDAFSPSRNDVMSTPEEIKNPESVNV
KNFVANIENTAPCQWKKPVETCKSSFAKKENQIGNLKKLEAPKGTSDSNTKQAAVLKPKF
AAPKDLWECPTCMIQNKNDILQCPACQTSKPGSVGPSQLQNQTNSSNEGSTSGGFSFTSG
KVNSTSSGGGFTFGNVKSASSGGGLSGKDVNSTSSGGGFTFGNVNSASSGGGLPGKDVNA
TSSGGGFTFGNVNSASSGGEIPSKDVNATSSGGGFTFGNVNSASSGGEIPSKDVNATSSG
GEIPSKDVNATSSGGGFTLGNVNSTSSHLKSKTDNINKDSSSGGFSFANTRVNPIASGGG
VTSTDVSSISSGGGFNFGASQTNQSTNIGSTFTFGQNKTTESSNFTFGSNNVTKSDANVT
STSEETKSSVIFSFGAGKSDENSANTIFSSAASSSKNIDKQIFSFGAPSSQTTTDNTLNT
KKESQKSNLSQVKQPTMNIAQAAAVGLLKVPGKEIETSEPVNKDIRQTNAGSTFAFPTSA
NTPSSLKTGLEQTAGSKVTNAGSTFAFTTSANAPSSSKSDLEQTAGSKVTNQNQAVSLNA
GVSPFSLLNKNSVETKTPGGLFKFGVAPSTTSTATLSTVSVVTPITTFLNATGSTIPQVS
PLNPSSTPKNTPFSFTGSLSQPKATVASAVPSFDIAASTSNKTAPLTQTNPSTFSFLGSA
ATQTTKATPAFNFGAVNGPTSSNGVSSTPTAATTSGLFSFTGSQPPVLPTQLAVENSNSM
GGEEMDADSNSNHGQSTFIQNPGGFNFSSAVSNTGQTPGGVFGALGNSSTAPSAQSGGFN
FSANTGASSTFQFGSSSSSMSGGFNFGASAPSSNTTPFMFGSSSTSVSGSTNQTSTPLSF
SFGGNGIKPAQNPTPAACDKPALFSMGAGQTTPSNRVFKKAVRRKRVGQEFEMKKSNDAS
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atggtcgatcaacctaaccagaagtcgtataaaatccgcggtcattcaaggcaacgaaga
agttccaaaccttacttgaggcctaacgaagcaaaaaataagggaatttttgataaagtc
aaagaatacttcaatccaagttggttggtcgggtatttttcatcaagcaaggacgattct
gaagagtacgagcgaaatttagacagtcacgctactgtcacacatgaggaaggcagtgct
tcgaatgtgagagagccaatacagcatgcttcttcttatgttgcagaagaggatgaaaat
gaggacagttttgaaagttttgaaaatgattctgaacagagtttgaatgaggacgatatg
aatgatgatctaactgttcacgacaagaatgacagaagggagaaacttgataaccgtgat
cactcgattcgattgtcaggttccctagatgatgattttgaggatgccaaagaaagacaa
aagaggacagtctttgattcttcagatcgtatatttcaaaggaccgatcatcttactcgg
aaaccattaccttccttactccattctcgtgctgcatcaagctcgttgctattgcaacgt
gggatgcacggcattcgaaataaaggaaatttattcagtgcaaattcaggtggaagcact
acttctagaatgaaattttcatcaacaccaattaccgcacatgatactggtgaatcaagt
gctaatctcgtgaatgataaactagcaaggcattctttaagtgcaaggaatttatcaata
aatgaccgcatgtcgactagaaatgagacaccaaaaatggcttctgtgccagaagataaa
ccatcaagaacatcaagtttaccagctctttcaactaccaattctacaccgttgttttct
gtcgagaaatttgtcacacctgtgcaacgatcgttcaaaaataaacgggttggttcacca
aactatcctggacctgtgatttatggtggagctttgaatgtttctcgtgaaatacctttt
aaaagaaggaagatgtcaacatcgccaggctccgagagccatcatcctgtatcaaaatta
cgtattcgaggtgtaaaacagttatcaacacaaagtgctgctgctggccgatccagcaca
aaaacggctcaacgtattcttgatgctttggagtcagtctcttcccctcttaaggatgtt
cgacgtattcctgcacccatatcattggcatctgcttcacctttatcttttattccttca
aagacaagaacaatacctcccaagacaaaagttggtccaagggtttcatatctgcaggca
aaattaattggtgatcctcctgtatcgtcacttcaaacccccgatgttgcgaaagtttcg
tttgttgaagaaccccgtgaatccacagaagtccaatctgatccatcaccttcaaccacg
cgccgaccttcaaatccccgctcccaagatagcacgtttttcagtgatctaaatgatgtc
gttctcaagacttctctgcctggttctttagcgcccaaatctttaccaacctctctatcg
ccaattgagaatacgaaaaaatctggtggcaaaatgaaaagcgctccacgcagggaagcg
atgcattatagctcgaataaaaacagcccggaaagcgaggttgcgaatcctctaccggaa
atcaataatgccataccacttcctgtgaacttgaataagaatttatctttcccaatgttc
aattcgtccaaaacacttcattcaaataacgatgtcgccaggaaaagttttattgatgac
aaacaaaagaaaccgccatcctgcgaaaggcaagagtcacctagaaacggctttctcttt
tcatctcccgaaactgaatctcgaaaattttcagttaaagagtgtcttgaaaccgcggat
aacgaggtatcgttctcctttagtgaacctgcgccagtaaaggtttctggaaataaaaaa
ccttcaaggagttcttcattgcaatcttcaaaatctgcgcctttgttatacacttcgccg
actcaaaattccgtttcgttattttcgaagagtcctcaaagcgatgacgcattttcgcca
tcaagaaatgacgtaatgtcgacgcctgaagagataaaaaatccagaatctgtgaatgtc
aagaactttgtggcaaatatcgagaatacagctccttgccagtggaaaaaacccgtggaa
acttgtaaaagcagtttcgctaagaaggaaaaccagattgggaacttgaagaagctagaa
gctcccaaaggtacttcggatagcaatactaaacaggctgctgtactaaaacctaaattt
gctgccccaaaagacttatgggaatgccccacgtgtatgatccaaaataaaaacgacatc
ctgcagtgtcccgcctgtcagacgagcaaacctggatccgtaggtccttcacagttacag
aatcagaccaacagcagtaatgaaggctccacctcgggtggtttttcctttacaagtggt
aaagttaactccacctcatcaggagggggctttacctttggtaatgtcaaatctgcctct
tccggagggggattatctggcaaggatgtcaactctacctcatcaggagggggatttaca
tttggtaatgtcaactctgcctcttcaggagggggattacctggcaaagatgtcaacgct
acttcatcaggagggggatttacctttggtaatgtcaactctgcctcatcaggaggggaa
atacctagcaaagatgtcaacgctacttcatcaggagggggatttacctttggtaatgtc
aactctgcctcatcaggaggggaaatacctagcaaagatgtcaacgctacttcatcagga
ggggaaatacctagcaaagatgtcaacgctacctcatcaggaggaggatttaccttgggt
aatgtcaactcaacatcttcacatttgaagagtaagacagacaacattaataaagattcg
tcatctggtggtttttcatttgccaacactcgtgtcaaccctatcgcatcaggagggggt
gttacaagcacagatgtcagctctatctcatcaggagggggattcaactttggcgctagt
caaaccaaccaatctacaaacattggatcaacttttaccttcggtcagaacaaaacaaca
gaatcgtcgaacttcacttttggaagcaataacgttacaaaatctgatgctaacgttacc
tcaacaagtgaggagactaagtcttcggtcattttctcgtttggtgctggaaaatcagac
gagaattccgccaacacgatcttttcaagtgctgcaagctcaagcaagaatattgataaa
cagatattttctttcggcgctccatcctctcaaacgacaactgacaatactctaaacaca
aaaaaggaaagtcaaaaatccaaccttagtcaagtaaagcaaccaacaatgaacatagcg
caagctgctgcagttggtctattgaaagttccgggaaaagaaatcgaaacaagtgaacca
gtcaataaagacataagacaaaccaatgctggctcaacatttgcattccccacctctgca
aacacaccgtcttcattgaaaactggtttggagcaaaccgctggttctaaggttaccaat
gctggctcaacatttgccttcaccacgtctgcaaacgcaccgtcctcatcgaaaagtgat
ttggagcaaaccgctggttctaaggttaccaatcaaaatcaagccgtttctttgaacgct
ggtgtctcgcctttctctttgctgaacaagaactctgtagaaaccaagaccccaggcggt
ctttttaaatttggagttgcgccatctactacctccacggcaactttgagtacagtatca
gttgttacacccattacaacgttccttaatgccacgggttcaacgataccccaagtcagc
ccgttaaatccctcgtccacccctaagaatacgcctttttctttcaccggttccttatct
cagcctaaggctactgtagcatccgctgtcccatcttttgatatcgccgcttcaacttcg
aataaaacagcaccgttaacgcaaaccaatccttcgacgttttcgttccttggctcagcg
gctacacagactaccaaagcaactccagcttttaattttggtgcagtgaacgggcctaca
tcaagtaatggagtaagttctacaccgaccgctgctacgacatccggtctgttttctttc
actggctcacagccacccgtcttacccactcagcttgctgttgagaattccaactcaatg
ggtggcgaagagatggacgcggactcgaatagcaatcacggtcaatcaacgttcattcaa
aacccgggaggcttcaatttttcctcggctgtttcaaatacaggccaaactccggggggt
gtatttggagcccttggcaacagctctacagctccttccgcccaatccggggggttcaac
ttttctgccaatactggggcgagttccacatttcagtttggatcttcatctagttcaatg
tcaggaggttttaactttggtgcatcagcgcctagctcaaacacaactcccttcatgttc
ggcagctcgtctacgtcggtcagcggttctacaaatcaaacttctactccgttgagtttc
agttttggcgggaatggcattaaacccgcacaaaatcccacacccgctgcgtgtgataag
cctgcattgtttagcatgggcgccgggcaaaccactccttccaatagagtcttcaagaaa
gcagtgcgacgaaaacgagttggacaagaatttgaaatgaagaagagcaacgacgcttca
tga
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integrated database retrieval system
