Xenia sp. Carnegie-2017 (soft corals): 124438050
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Entry
124438050 CDS
T08024
Name
(RefSeq) cleavage stimulation factor subunit 3-like
KO
K14408
cleavage stimulation factor subunit 3
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124438050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xen03019
]
124438050
Messenger RNA biogenesis [BR:
xen03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
124438050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
KorB
Motif
Other DBs
NCBI-GeneID:
124438050
NCBI-ProteinID:
XP_046843995
LinkDB
All DBs
Position
Unknown
AA seq
699 aa
AA seq
DB search
MAYRSKSERGQKAEARLLADPYDTESWNVLLREAQSLPIASGRALYERLVERFPTCGRYW
RLYIEQEMKAKNYENIEQLFQRCLMKVLNVDLWKSYLHYVKETKGSLPTFRDKMTQAFEF
ALDKVGLDFNCYQIWADYIAFLKAGEASGSFAENQKIMNLRKVYQRAVFTPINNLESLWR
DYTSFEQSVNKVLAKKLIDEKTREYMNARRAAKEYEAITRNITRGNPSVPPQGTPSEMKQ
LNLWNKYLQWEKSNPLKSEDMAVLTKRVMYAFEQALLALSFYPNIWYQAALFLEDRSRQL
FDQGDQQNGKIMADEANAIYERATSTHMKFNVMLHFAWADFLESQMKVNKAKDVYENLLS
TPNIDHTLIYIQFMKFSRRSEGIKESRAVFKRAREDTRCCYHVFVAAALMEYYITKDKVV
SMKIFELGLKKFANEAKYILAYLEFLIHLNDDNNTRVLFERVLSNLPQEKSREIFKKFLD
FEANSGDLASYLKVEKRKLSLFKEELESRETTLLVDRYRYLDLYPCTKTELAVLGYETQE
TEECSQTSTSLQGSLVDETMNLPTKFPAPNLSQMSPFKPVPKGTAGVHHIPGGVFPVPPA
AAHLISLMPPPMCFQGPFVMVDELLKMIADCHLQKPQTTSLPEGSYNGGGIRSESMIVED
ARGKKRSLNGNDSDDEEKLVSLPPVNDIYRMRQQKKVAF
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcataccgtagtaaaagtgagagaggacagaaagctgaagcacggttgttagctgat
ccttatgatacagaatcatggaatgtgttgctgcgtgaggctcagtcattgcccatagca
agtggaagagctctgtatgagagacttgttgaaagatttccaacatgcggccgttattgg
agactctatatagaacaagagatgaaagcgaaaaactacgaaaacattgaacagttattt
caacgttgtctcatgaaagtcctaaatgttgatttatggaagtcttatctacattatgtg
aaagaaacaaaaggctcgctaccaacgtttagggacaaaatgacgcaggccttcgaattt
gccttggataaagttggattggactttaattgttatcagatatgggcagattacattgcg
tttttaaaagcaggagaagcaagcggctcattcgcggagaatcaaaaaatcatgaattta
cgtaaagtttatcagagagctgtgtttactcccattaataaccttgagtcactctggaga
gattacacgtcatttgaacagagtgtaaacaaagtattagcaaagaagttgatcgacgag
aaaacgcgcgaatatatgaacgcccgccgtgcagctaaggaatatgaagcaattacaaga
aatattactcgtggtaacccgtctgtgccaccacaagggacccctagtgagatgaaacag
cttaatttatggaataagtatctccagtgggaaaaaagcaaccctttaaaaagtgaagat
atggctgttcttacaaagcgagtaatgtacgcctttgaacaggctttacttgcattgtcc
ttctatccaaatatttggtatcaggctgctttattcttggaagatcgtagtcgacagctg
tttgatcaaggagatcagcaaaatggtaaaataatggcagatgaggctaacgcgatttat
gaaagagcaacgtctacccatatgaagtttaatgtcatgttgcattttgcatgggcggac
tttcttgagagtcaaatgaaggttaataaagcaaaggatgtttacgaaaatttattaagt
acaccaaatattgaccacactttgatctatattcaattcatgaagttctcgagaagatcc
gaaggtattaaagaaagtcgagcggttttcaaacgagcccgcgaggatacgagatgttgc
tatcatgtttttgtcgcagccgctctaatggaatattacataacgaaggacaaagttgtg
tcgatgaagatttttgagctaggtttaaagaaatttgcgaacgaagcaaagtatattctc
gcctatttagaattcttgattcatcttaatgatgataacaatacgcgagttttatttgaa
agagttctcagtaaccttccacaagaaaagtcaagggaaattttcaaaaagttcctcgat
tttgaagccaatagtggcgaccttgcgagttatctaaaagtggaaaaaagaaaattatct
ttgtttaaagaggagctcgagtcacgtgagaccacacttctggtggatagatatcgctat
ttggatctttatccgtgtacaaaaactgaattagctgttcttggctacgagactcaagaa
actgaggaatgtagtcaaacttcgacatctttgcaaggatcacttgttgacgagacgatg
aatttgccaacgaagtttcccgcaccgaatttgagtcaaatgtcgccattcaaacctgta
cctaaagggactgctggagttcatcatattcccggtggtgtatttcctgttccacccgcg
gcagctcatctgatctctttaatgcctccaccaatgtgttttcagggtccttttgttatg
gtggatgaattgcttaaaatgattgctgactgtcatcttcagaaacctcaaacaacatct
ctacctgaaggcagctacaacggtggtggcataaggagtgaaagtatgatagttgaggat
gctagaggcaagaaacgatcattaaatggtaacgatagtgatgatgaagaaaagctcgtg
agccttccacccgtcaatgatatctatcgcatgagacaacagaaaaaagttgccttctga
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