Xenia sp. Carnegie-2017 (soft corals): 124438070
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Entry
124438070 CDS
T08024
Name
(RefSeq) laminin subunit gamma-1-like
KO
K05635
laminin, gamma 1
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124438070
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
Laminin_B
EGF_LMN_ATRN
Motif
Other DBs
NCBI-GeneID:
124438070
NCBI-ProteinID:
XP_046844017
LinkDB
All DBs
Position
Unknown
AA seq
1619 aa
AA seq
DB search
MICLQLCLMVALVLQCIDAQAIRNGNTNSEGRMKCYNEQSEPIRCVPGFVNAAFRREVKS
NNTCGTPATKYCVQTLSTGQREECQYCDSRSNATSHPAILITDVKDDRNYSWWQSDTLYT
FLRNNIYDRTNRFSKVVLTLDLNKAFDIVSIRLRFRSLRPESMAIFKKTTADDNAPWIPY
QYYSTSCQETYGIQPDQLIIGDSNLQTALCTAKYSQIVPIFGGEVLFRTLKNRPGKNNIE
KLPELQEWILATSLKFELDRLNTFADDIFGDPNVLRSYYYAIIDLSVLGKCHCNGHASIC
KPRNGNNYFCECEHNTTGIDCEKCLPTHNNKPWGRATSENAFACEACECNGLAETCEFEA
ELYERTGKGGRCINCRNNTGGAHCERCRVNYHREQDHEDCRACNCNPTGSLSLQCYKDGR
CYCKPGVTGDKCDRCEPNHYGFSSDGCSPCECSVKGTRLDNFQCDDNGQCNCKKNVVGKN
CDKCLDGHFALEKDNPDGCRHCFCYGHSSDCKSAAGYSSVNLTSTFRTGFEGWRAFNSGG
EDLTATLGTWNAGEQSVGVTSINQDSLFLTAPLPYLKKKRSSYSRILSFRFKVASTENMQ
FTKGDIMLISRSRDGLMVSTSLTGQGNPVPTREFQLYQYRLHEDPSFDWGPQLNGFNFQR
LLNHLDEIKIRMTYSDQGTGIIDDISLEYATKDTNAVDFVVWVEECTCPPPYVGLSCDAC
REGHKHEIVNGSAYDRCVRCECNQHADSCDADTGKCDCLHNTVGNDCSICKDGFYGNPTA
GTPDDCKPCPCKYGTKCIEIGGKVTCTVCDEGHQGELCESCVDGYFAAPGDPCRKCNCNG
NIDANAVQNCDSISGDCLKCIYNTRNGPKNQCELCKVGYYGDALTYPKPGCKACDCHENG
TYSSSLNVVDGTPLPCDQNGQCTCRENVVGLKCDQCLENYWNINSGDGCEACACHSTGAY
NDSCDMFSGQCVCKPGVGGRRCDQCLPDHYQFSPEGCRACNCDPNGSLGVSCDEDGRCVC
RPGVLGIKCDQCGENRFNLSAGCTRCPPCYDELQIKVNKLRAFLKALNESSENITRGSAD
ANPDKEFLKRLNIVKDELHLLLLRAENISEADQELMRRLDAVNQTLNVIDEKLKNSETKT
TEADVNAKTASSEVKLAEESIERSWKLVDEIRGPTNRTSEIINEIYKISSNWNKTIINIW
ETVNKIQNRSEDQQREIEELRKKALEALNASTLANREMEDILLDQKNTEAKLMFSDNTIG
ELKALADDVYDNSSKSQSAASSTLQKAEELLDEASKPLAFVNVNETKAEAATSTNEAKEL
QDEARSLKGNTNLQNISDAELMKRVKKLYRIENVTSDLLNQVKQANRTADEAIVNGTKTL
ELAKENLKLLENFNKEVNESMTRADKAKGNLVEIRRLISLANNNTAKANDEIDDARKLVG
DAENIAKSGSETSSKTNDDAEKLKREVDSFVVPDANIYEDVKNAEKMIEKYEERVKNQSR
LVKNAKKTVNESKMNAQSVKDTIKKVRSSIIEVESKIADLGDLDWDRLYELEKAIAEQEK
MERDLKEKVAFLEVDKTRIDRQIKSYYIDLSELNEALVELTKNHGKLHGTCLKEVPDPN
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atgatttgcctacagctatgcttaatggtcgcactagtacttcaatgcatcgatgcgcaa
gctatcaggaatggtaacacgaacagcgaaggcagaatgaaatgttataacgaacagtcc
gaacccattcgatgtgttcctggttttgtgaacgccgcatttcgacgcgaagtgaagtcg
aacaacacttgcggtacacctgctactaaatattgcgttcagactctgtcaaccggtcaa
agagaggaatgccaatattgcgatagtcgcagtaacgcgacaagtcatcctgcgattctt
atcactgacgtgaaggacgacagaaactactcttggtggcaatctgacacgttgtatacg
ttcttaagaaataatatatacgatcgcacgaatcgtttttctaaggttgtgctgaccctg
gatttgaacaaagcttttgatatcgtaagcataagacttcgtttccgttcgttgcggccc
gagtccatggcaatatttaagaaaacaacggccgacgacaatgctccgtggattccctat
caatactactccacctcttgccaagaaacgtacggtattcaacccgaccaacttataatc
ggtgatagtaaccttcaaacagccttgtgcactgcgaaatacagtcaaattgtgcctatt
ttcggaggtgaggtactttttcgaacactgaagaaccgaccgggcaagaacaacatcgaa
aagttaccagagttacaggaatggatccttgcaacgtccttaaaattcgaactggaccgt
ttgaacacttttgccgatgacatttttggcgatcccaacgttctcaggagctactactac
gccatcattgacctttctgtattgggaaaatgtcactgcaatggtcacgcatcgatttgt
aaaccaagaaatggtaataactatttctgcgagtgcgaacacaacacgactggtattgac
tgcgagaaatgcctaccgacacacaacaataaaccttggggaagagcgactagtgagaat
gcttttgcttgtgaagcgtgtgaatgtaatggccttgcggaaacctgcgaattcgaggca
gaactttacgaaaggaccggcaagggtggtcgatgtataaactgtcgtaataacacgggg
ggggctcactgtgagagatgtcgtgtgaattaccaccgtgaacaagatcacgaagactgc
cgagcatgtaactgcaatcctactggttcattgagtctgcagtgttacaaggacggtcgc
tgttactgcaaacctggtgtaactggggataaatgtgatcgttgcgagcctaaccactac
ggtttctcttcggatgggtgcagtccgtgtgaatgctcggtgaaaggaacgcgattggat
aacttccaatgtgacgacaacggtcagtgtaattgcaagaaaaacgttgttggtaagaac
tgtgacaagtgtcttgacggtcactttgccctggagaaggacaatcccgatggatgtcgt
cactgcttctgctatggtcattcatccgactgtaagtcagctgctggctactccagtgtc
aacctgacatcgaccttccgtactggttttgagggatggcgagcatttaacagcggaggc
gaggacctaacggcaacgcttggaacgtggaatgctggtgaacaaagcgtgggggtgacg
tcgatcaaccaagattctcttttcctcaccgcaccgcttccatatttaaaaaagaaacgc
agcagttattcgaggatcttgtccttccgctttaaagttgccagtacagaaaacatgcag
ttcaccaaaggcgacatcatgttgatatcaaggagtagagatggattgatggtttcaact
tctctcacgggacaaggtaaccccgtaccgacgcgtgaattccaactataccaatatcgt
cttcacgaggacccgtcgtttgactggggcccacagctaaatggcttcaattttcaacgc
ttgctcaaccatttggatgaaatcaaaatcagaatgacgtattccgaccaaggcacgggc
atcatcgacgacatatctctggagtacgcgaccaaagatacgaatgccgtcgacttcgtg
gtttgggtagaggagtgcacctgcccacccccctacgttggattgtcctgtgatgcctgt
cgcgaggggcataagcacgagatagtcaatggttctgcgtatgacagatgcgttcgatgc
gaatgtaaccagcacgcggacagctgcgatgccgatacgggaaaatgtgactgcttgcac
aacacagttggaaatgattgctcgatttgcaaagacggtttttacggcaacccaaccgca
ggtactccggatgattgcaagccatgcccgtgtaaatacgggacaaagtgcatcgaaatt
ggcggaaaagtcacgtgtacagtttgcgatgaaggacatcaaggtgaactttgtgaatcg
tgtgtcgacggatattttgctgcgcccggggatccttgcagaaaatgcaattgcaacggt
aacatcgatgcgaacgctgttcagaattgcgactccatttctggcgactgtttaaagtgc
atatacaacacacgaaacggtccgaagaatcagtgcgagctctgtaaagtcggttactat
ggtgatgcgttgacttatccaaaacccggatgcaaagcctgcgactgtcacgaaaatgga
acgtactcatcatcgttgaatgtcgtcgatggcacacccttaccatgtgatcagaatggt
cagtgtacgtgccgcgagaacgtcgttggtttgaaatgcgaccaatgtttggagaattac
tggaacatcaactccggggatggttgtgaggcgtgcgcatgtcactcgacgggtgcttac
aatgatagttgcgacatgttctctggacaatgcgtctgcaagcctggtgttggtggtcga
cgttgtgatcaatgtttaccagatcattaccaattctcgcccgagggctgccgagcttgc
aattgtgatccaaacggatctctaggcgtctcgtgtgacgaggacggacgttgtgtttgc
cgaccaggtgtcttaggaatcaaatgtgatcaatgtggcgaaaatcgattcaatctttct
gctggatgtacacgctgccctccttgctatgacgaacttcagatcaaggtaaacaagctt
cgggcatttttgaaagcattgaacgagtccagcgagaacataacccgtggctccgcagac
gcaaatccggacaaggagttcttaaaacgcttgaacattgtgaaagatgagttacatttg
ttattattgagagcagaaaacatttctgaggccgaccaagagctaatgcgtcgactggat
gccgtcaatcaaactttgaatgttatcgatgaaaagctaaaaaacagcgaaactaagaca
acggaagctgacgtgaatgcaaagactgccagcagtgaagtgaaattggccgaagagtca
attgagcgttcctggaaacttgtcgatgaaatacgtggcccgacgaatcggacatccgag
atcatcaatgaaatctacaaaatcagttctaactggaacaagactatcataaacatatgg
gagactgttaataagattcaaaaccgttccgaggatcaacagcgggaaatagaggaattg
agaaagaaagcactcgaggctttgaacgcttcgacattggcaaacagagaaatggaagat
attctgctcgatcagaaaaatactgaagcaaaattgatgtttagcgacaacacgatcggt
gaactaaaagcccttgcagatgacgtctacgataacagttctaaaagtcaaagtgccgca
tcaagcacacttcaaaaggctgaggaacttttggacgaagcaagcaaaccgctcgctttt
gtcaatgtcaatgaaactaaagccgaagctgcgacgtctacaaacgaagcaaaggaattg
caagatgaagcaagaagccttaaaggaaacacaaacttacagaatatttctgacgcagag
ttgatgaagagagttaaaaaattgtatcgcattgaaaatgtcaccagtgatcttttgaat
caagtaaagcaagcgaatagaacggcagacgaggctatcgttaatggtacaaaaactttg
gaacttgcgaaggaaaatcttaaacttctagagaatttcaacaaagaagtaaacgaaagt
atgactagagcggacaaggccaagggaaatttagtcgaaatacgtcgtcttatatctctc
gccaacaacaacaccgctaaggccaatgatgagatcgatgatgccagaaaacttgtcgga
gatgctgagaatattgctaaaagcggaagtgaaacatcgtccaaaacaaatgacgacgcc
gaaaaattgaaaagggaagtcgacagctttgtcgttccggacgcaaatatttacgaagac
gtcaaaaatgccgaaaaaatgatcgagaagtacgaagaacgggtaaaaaatcagtcgcgt
cttgttaaaaatgcgaagaaaacggtaaacgaatcgaaaatgaatgcgcaatccgtcaaa
gataccataaagaaagttcgctcaagcatcattgaagtcgagtcgaaaattgctgacttg
ggagacttggactgggataggttgtacgagctcgaaaaggcaattgcggagcaagagaaa
atggaaagggatctcaaagaaaaggtagcatttctcgaggttgataagacaagaatagat
cgacaaatcaagagctactacatcgatctgagcgaactaaacgaagctttggtagaactt
acaaagaaccacggcaaacttcatggcacgtgtttaaaggaagtgccggatcccaactaa
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integrated database retrieval system