Xenia sp. Carnegie-2017 (soft corals): 124438150
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Entry
124438150 CDS
T08024
Name
(RefSeq) retinoic acid receptor RXR-alpha-B-like
KO
K08524
retinoid X receptor alpha
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124438150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xen03000
]
124438150
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xen03310
]
124438150
Transcription factors [BR:
xen03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
124438150
Nuclear receptors [BR:
xen03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
124438150
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
124438150
NCBI-ProteinID:
XP_046844099
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MIYSQCKRKATVLVSNSLPEQHFNFPETPVQTKVEQSNDNSNNLPPCLAMASHTRQMNVV
MSPSIQPSASSITHTQSQPEDSSSLQKDDKNLPMNCEVQSNICVICGDKATGNHYGVTSC
EGCKGFFKRTVQNKKTYTCRNLSKDCPIDKRHRNRCQFCRYQKCISAGMLKEAVREDRTP
GGKHKNANVLKIKIPSLEDSGQLQVMYWSSPMIESLLKISNSSIPQLKVAQENSDIKLST
IDYVIQLADWQIAEVWSWFNKLNFLSEIMNGDRQILIQNSLMEILAFGLARRSMKTGNSL
LLGEGVYLDVEAASVAGIGDITQRILQLSAKFNELKLGEEEYVCLKIIVLLNPDVRGLCN
QEHIERLQDQVHTHLQDYIIHRYPTRPNRFGNVLLRLPELRSISTKITERLFFLNVTHDL
NIKTRLNDFLYARERRF
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgatatacagtcaatgcaagagaaaagcaacagttttggtaagcaattcattacccgag
caacattttaactttccagaaactccagttcaaactaaagtagagcaatcaaatgacaat
tcgaataatcttccaccatgtttagccatggctagtcacactcgacaaatgaatgtggtt
atgtctcctagcattcaaccatctgctagttccattacacatacacaaagtcaacccgaa
gacagttcatctttacagaaggatgataaaaatttgcctatgaattgtgaagtacaatca
aatatttgtgttatttgtggtgacaaggcgacgggcaatcattatggtgtaacaagttgc
gagggttgcaaaggatttttcaaacggactgttcaaaacaaaaagacctacacatgtagg
aatttgtcgaaagattgtcctattgataaacggcacaggaatcgttgtcagttctgtcga
tatcagaaatgcatttctgctggaatgttgaaggaagccgttcgcgaagatcgcactcct
ggtggtaaacacaagaatgcaaatgtactcaagatcaaaataccatctttggaggattct
ggtcagctacaggtcatgtattggtcatctcccatgatagaaagtttgcttaagattagc
aactcttccatacctcagttgaaagttgctcaggaaaactcggacataaagttaagcaca
attgactatgtcattcagctggctgactggcagattgcagaggtttggagttggtttaat
aaacttaattttctctcggaaatcatgaacggcgaccgacagatcttaatacagaattct
ctgatggaaattcttgcattcgggcttgctcgtcgctccatgaagactggtaatagtctc
ctactaggcgaaggagtgtatttggacgttgaggctgcgagtgtggctggaattggggat
atcactcaaagaattcttcaactttctgccaagtttaatgagctgaaattaggcgaagaa
gaatatgtatgtttgaagataattgtactgctgaatccagatgtcagaggtctgtgtaac
caagaacatatcgaaagactccaagatcaggtacacacgcatttgcaagactacattatc
catcgttatcccactcgtcccaacaggtttggtaatgttttattgcgtctgccagagttg
agatccatcagcacgaagattacggaacgattatttttcctgaatgttactcatgatttg
aacataaaaacacggcttaacgactttctttatgcacgcgagcgtcgtttctga
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