Xenia sp. Carnegie-2017 (soft corals): 124438414
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Entry
124438414 CDS
T08024
Name
(RefSeq) small nuclear ribonucleoprotein E-like
KO
K11097
small nuclear ribonucleoprotein E
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124438414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xen03019
]
124438414
03041 Spliceosome [BR:
xen03041
]
124438414
03032 DNA replication proteins [BR:
xen03032
]
124438414
Messenger RNA biogenesis [BR:
xen03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
124438414
Spliceosome [BR:
xen03041
]
Complex A
U1 snRNP components
Sm proteins
124438414
U2 snRNP components
124438414
Complex B
U1 snRNP components
124438414
U4/U6.U5 tri-snRNP components
124438414
Complex C
U2 snRNP components
124438414
DNA replication proteins [BR:
xen03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
124438414
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
124438414
NCBI-ProteinID:
XP_046844496
LinkDB
All DBs
Position
Unknown
AA seq
94 aa
AA seq
DB search
MAYKAQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQTNMRIEGHIIGFDEYMNLVLDEAE
EVHIKRKSRKPLGRILLKGDNITLIMSVSATTAQ
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atggcttacaaagcgcagaaagtacagaaagttatggtccagccaattaatcttatattc
aggtatcttcaaaacagatcaagaatccaagtgtggctttatgaacagacaaacatgaga
attgagggacatatcattggttttgatgagtacatgaatcttgttttggatgaagctgaa
gaagttcacataaagaggaaatcgagaaagccattaggacgcatattgttaaagggagac
aatataacacttattatgagtgtttcggcgacaacagctcaatag
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