Xenia sp. Carnegie-2017 (soft corals): 124438702
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Entry
124438702 CDS
T08024
Name
(RefSeq) uncharacterized protein LOC124438702
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xen04040
]
124438702
Ion channels [BR:
xen04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124438702
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ank_2
Ion_trans
Ank_4
PKD_channel
Ank
Ank_3
Importin_rep_6
Cas_Csm6_HEPN
Motif
Other DBs
NCBI-GeneID:
124438702
NCBI-ProteinID:
XP_046844850
LinkDB
All DBs
Position
Unknown
AA seq
1506 aa
AA seq
DB search
MTFPAAPENSLELQERYLDSADGNSTRISHAEVPNEEIFDAAAREDVKTDLQIAAKKGCE
DDIQKLLTEKADLKYALLRCVYENDLQCLEELLTYHKKSDDRLLEPIIKAAQLGHYKIVE
HFMSKDYLIDDPDKCEYKSERCKLNSEMLRSRIAINCFRGLSSPVYMCLGYLEDKIKDNK
GNTIDPLSQAFELNKKLQKRARDEPELKKEYMELSDKCKTFTTELNSACRDKEDLMALLD
IDEKHFAPNDDEKDDENVKKESSSAVATSLKKAINSNDKEFVAHPHTQMLVNFVVYSGLP
KNIQRTRIVYRLFLFIFYTIFFPVFALQYLFCPCSKISKMMSTPYLKFVSHISQFIIFLF
LIAGSSLRDNHTPTVIEYIIFLTVIGMVCQEIREMRCHDRQMNYVFKWWNINMIIMLTLF
VMAGLSWIAGFAITGGWSIKDYSVRKYAKNKDGYNLLLLGNSFFSVASVFSVIHLIDFCQ
VNSRLGPLQLSLYRMIQDVVKFLILFSAIFLAFVMGLRNLYSYYNSIQDEIIKENKNLSD
RRILEDTNKRFSTLFQSSKHMFWALFDKIELSDFDTKDSTFEITQETGRLLFAMYSILAV
LIALNMLIAMMSHSYDYISQDDDIQWKFSRTKLWLEFMEKGSTLPAPYNLISIVIELFCK
LKQRLKRESGDTHSKDQPSRDEAQDKRKEIIKRLIRRYVLAQKAREKQCLGTAKDMEESK
ICLHLLVSKLFLQLDVCICMKEEANKYESRRGSLKFEMTFAASHTNLELQALHLDSADGN
STRISDAGVSNEEFFNAVASGDVEAVQSKIKNTNNPVDFNAINSDGKTALQIAAENDRKD
VIEKLLTEKADLKYALLRCVYENDLQCLEVLLTYHENSDDRLLAPTIKAAQLRHYEIVEH
LMSKGYFIDDPDKCEYKSESCKLNSEMLRSQIAINCFRGLSSPVHMCLGYLKDKIKDNKG
NTIDPLSQAFELNKKLQKRARDEPELRKEYMELSDKCKTFTAELNSACRNKEDLMALLDI
DQKHFAPNDDENDGENVKKESCSEVVTSLKKAINSNDKEFVAHPHTQMLVNFVVYSGFPK
NIQRTRIVYRLFLFIFYTIFFPVFALQYLFCPCSKISIMMSTPYMKFVSHISQFIIFLFL
IAGSSLRDNHTPTVIEYIIFLTVIGMVCQEIREMRCHDRQMNYVFKWWNINMIIMLTLFV
MAGLSWIAGFAITGGWSIKDYSVRKYAKNKDGYNLLLLGNSFFSVATVFSVIHLIDFCQV
NSTLGPLQLSLHRMIQDVVKFLILFSAIFLAFAMGLRNLYSYYNSIQDEIIKENKNLSDK
RILEDTNKMFSTLFQSSKHMFWALFDKIELSNFDTKDSTFEITQETGRLLFAMYSILVVL
IALNMLIAMMSHSYDYISQDDDIQWKFSRTKLWLEFMEKGSTLPAPYNLISIVIQLFCKL
NQRLKGEVGDSHSTDQTSRDEAQDKVRVARCKYASSCSDLRKHLRKKIMKRLIRRYFQAQ
EARVKQ
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atgactttcccggcagctcctgaaaatagcctcgagttgcaagaacgttacttggacagt
gctgatggaaattcaacacgaatttcgcatgccgaagttccgaatgaagaaatcttcgat
gctgcagcaagagaggatgttaaaacggaccttcaaattgcggctaaaaaaggttgcgaa
gatgacatacaaaagcttttgacagaaaaagctgacttgaaatatgctcttttacgatgc
gtttatgagaacgatcttcaatgcctagaagagttgctgacatatcacaaaaaatcagac
gaccgcttgctcgagccaattataaaggcagctcaattgggtcactacaagattgtagaa
cacttcatgtcaaaggattaccttatcgatgatccggacaagtgtgaatacaaaagtgaa
cggtgcaagctaaattcggagatgcttcgttcacgaattgccataaattgcttcagaggg
ctttcaagtcccgtctatatgtgtttaggttacttagaagacaagatcaaagataacaaa
ggcaacacaatagaccccctttctcaggcgtttgaattaaataagaagttacaaaaacgc
gcgagagatgagcctgaactgaagaaggagtacatggaattgtcagacaaatgcaagacg
ttcacgacggaactaaacagtgcttgcagagacaaagaggatcttatggctctgttagat
atcgacgaaaaacattttgccccgaatgatgatgagaaggatgatgagaatgtaaagaaa
gaaagcagttctgcggtagcaacttcattgaaaaaggccatcaacagtaatgacaaggag
tttgtagcccatcctcatactcaaatgttggtcaacttcgtcgtatactcgggccttcca
aagaatatccaaagaacacgcattgtttaccgtctgtttttatttatcttctacacgatt
ttcttccctgtctttgcgttacaatacctcttctgtccttgttcaaaaatttcaaaaatg
atgtccactccatacctgaagtttgtcagccatatttcgcagttcataatctttcttttc
ctgattgctggctcctcgctgcgagataaccacactccaacagtcatagaatatatcatt
ttcctaactgtcatcggaatggtatgtcaggagattcgtgaaatgcgatgccatgatcgc
caaatgaattatgtcttcaagtggtggaacatcaacatgatcataatgctgactttgttt
gtcatggcaggattaagttggattgctggttttgccatcacggggggttggtcaatcaaa
gactactccgttaggaaatacgccaagaacaaagatggatataatttacttttactggga
aatagctttttctcagtggcgagtgtcttcagcgttattcacttgattgatttttgtcag
gtcaactccaggttagggccgctgcagttatcactatatcgtatgattcaagatgtcgtg
aaatttctgatattattttctgccattttcctcgcatttgtcatgggtttaagaaacctt
tattcgtactacaacagcattcaagacgagattatcaaagaaaacaaaaatctcagcgac
agacgaatcttagaagataccaacaaaaggttttcaactctttttcaatcgtcaaaacat
atgttttgggcgctcttcgacaaaatcgagttaagcgactttgatacgaaagactcgacg
tttgaaatcacacaagaaactggcagattgctattcgcaatgtactcaatccttgctgtc
ttgatagcactcaacatgctcattgcaatgatgagtcattcatacgactatatctcgcaa
gacgacgacatccagtggaagttcagtcgaacaaaattgtggctggaattcatggaaaaa
ggaagtactttaccagctccgtacaatctaatatcgattgtgattgaactgttttgcaag
ttaaagcaaagactcaaaagagaaagtggcgatacccattcgaaagatcaacccagtaga
gacgaagcacaagacaagagaaaagagataatcaaacgcctaattcgacgatacgtccta
gcacaaaaagctcgggaaaaacaatgtttgggaacagctaaggacatggaggaaagcaaa
atttgtcttcatttgctggtatcgaaactgttcctgcaattagatgtttgtatctgtatg
aaagaggaagcaaataaatacgaatcaaggagaggttctttgaagttcgaaatgactttc
gcagcttctcatactaacctcgagttgcaagcacttcacttggacagtgctgatggaaat
tcaacacgaatttcggatgccggagtttcgaatgaagaattcttcaatgctgtagcaagt
ggggatgttgaagcagtccagagtaaaatcaaaaacaccaacaatccagttgactttaac
gccataaactcagatggcaaaacggcgcttcaaattgcggctgaaaacgatcgcaaagat
gtcatagaaaagcttttgacagaaaaagctgacttgaaatatgctcttttacgatgcgtt
tatgagaacgatcttcaatgcctagaagtgttgctgacatatcacgaaaactcagacgac
cgcttgctcgcaccaactataaaggcagctcaattgcgtcactacgagattgtagaacac
cttatgtcaaaaggctactttatcgatgatccggacaagtgtgaatacaaaagtgaatcg
tgcaagctaaattcggagatgcttcgttcacaaattgccataaattgcttcagagggctt
tcaagtcccgtccatatgtgtttaggttacttaaaagacaagatcaaagataacaaaggc
aacacaatagacccgctttctcaggcgtttgaattaaataagaagttacaaaaacgtgcg
agagatgagcctgaactgaggaaggagtacatggaattgtcagacaaatgcaagacgttc
acggcggagctaaacagtgcttgcagaaacaaggaggatcttatggctctgttagatatc
gaccaaaaacattttgccccgaatgatgatgagaatgatggtgagaatgtaaagaaagaa
agctgttctgaggtagtaacttcattgaaaaaggccatcaacagtaatgacaaggagttt
gtagcccatcctcatactcaaatgttggtcaacttcgtcgtatactcgggctttccgaag
aatatccaaagaacacgcattgtttaccgtctgtttttatttatcttctacacgattttc
ttccctgtctttgcgttacaatacctcttctgtccttgttcaaaaatttcaataatgatg
tccactccatacatgaagtttgtcagccatatttcgcagttcataatctttcttttcctg
attgctggctcctcgctgcgagataaccacactccaacagtcatagaatatatcattttc
ctaactgtcatcggaatggtatgtcaggagattcgtgaaatgcgatgccatgatcgccaa
atgaattatgtcttcaagtggtggaacatcaacatgatcataatgctgactttgtttgtc
atggcaggattaagttggattgctggttttgccatcacggggggttggtcaatcaaagac
tactccgttaggaaatacgccaagaacaaagatggatataatttacttttactgggaaat
agctttttctcagtggcgactgtcttcagcgttattcacttgattgatttttgtcaggtc
aactccacgttagggccgctgcagttatcactacatcgtatgattcaagatgtcgtgaaa
tttctgatcttattttctgccattttccttgcatttgccatgggtttaagaaacctttat
tcgtactacaacagcattcaagacgagattatcaaagaaaacaaaaatctcagcgacaaa
cgaatcttagaagataccaacaaaatgttttcaactctttttcaatcgtcaaaacatatg
ttttgggcgctctttgacaaaatcgagttaagcaactttgatacgaaagactcgacgttt
gaaatcacacaagaaaccggcagattgctattcgcaatgtactcaatccttgttgtcttg
atagcactcaacatgctcattgcaatgatgagtcattcatacgactatatctcgcaagac
gacgacatccagtggaagttcagtcgaacaaaattgtggctggaattcatggaaaaagga
agtactttaccagctccgtacaatctaatatcgattgtgattcaactgttttgcaagtta
aatcaaagactcaaaggagaagttggcgatagccattcgacagatcaaaccagtagagac
gaagcacaagacaaggtacgggtagcgagatgcaaatatgcaagttcttgttcagatctt
cgtaaacatttgagaaaaaagataatgaaacgcctaattcgacgatacttccaagcacaa
gaagcacgggtaaaacaatga
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