Xenia sp. Carnegie-2017 (soft corals): 124438864
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Entry
124438864 CDS
T08024
Name
(RefSeq) vacuolar protein sorting-associated protein 13A-like
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xen04131
]
124438864
Membrane trafficking [BR:
xen04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
124438864
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
Motif
Other DBs
NCBI-GeneID:
124438864
NCBI-ProteinID:
XP_046845029
LinkDB
All DBs
Position
Unknown
AA seq
2002 aa
AA seq
DB search
MVFESHVVSILNNVLGQYVENLDSSQFQMSIWGGDVKLENLVFKENALDVLNLPLKIVRG
HLGKLVLKIPWKNLYSEPVVARVDEVYILARPNTHMKYDAEKEEKLVQERKQNELTAIED
AIRYAEEAKKKTKDDHEKNLSFTEKLALHIVKNIQVFVSNIHVRYEDMVSSEDNTFSLGV
TLENLTAQSVNDEWKPDMVDPKQSLVNKLVKMNNLSVYINTGDVIGKAPSMDEWLNMAKA
GIATGKFGINRPENYTYVIEPLSSDTKAKLNTSSIPDINIPKVFVEIIMEELHVQLAKHQ
FKNVMRLVENMDRLKTNCQYRKYRPSVSVKENKRAWWNYAIMAILEEDIKRRSKNWSWEY
IVEHRMNCHKYMNLYKKKLSRKTICENTQKEIDHYEKILDVLNITIWRRQAEIETKKEGK
NYELNEQRKKSEGGWFSGLFRKKSDSKSALGLTLEEEKAEEKKLYSAIGYSENEAPDKLP
PEYVAYKLKFSQQRIHIQLCNDSLKPEICVSNVTLTNLFMELGYRPGSLAVSVVGKLEKM
NVHGCSVAKQAAPEIIRSLPGHSDIKDYVYASFETNPLDGKADQRLRLKVQPIEILYDAE
TIESLMNFFTLPEDVQLAEISAAAYSQINGIRNQSRANLSYAIETRTLLDIDIFIHSPYI
VIAEKGILTDNSAILVVDLGSLKVSTDPSQERLTNTKSLSPEELETRVYDRFDIELNNLQ
VIYAKPGENWKEIRYENHSSMHVLNPFAINIQLFKCLAPEDVRLTQIRFNGLLSMVKIDV
TDKRLDELLKLALSIPIPGSTQKSPAASTPQETIVREVQPAAKVSTLNAVIETDIKAEVS
EETFGTPPEFPDQYMEDLARLASEEREAMMLAKSEQINVSLKFEIVQINVTLLKKDQFGI
ESPLLEVDLLRLGSQVSIRQYDLSVLANVGAVTVKEMVHGIDGEALELVSTPADADILNV
KYIEAGKNHPRFKDDFNSTLKNIDVQLSHLKVVLHQEALLNIMAFVNSILPASEEEIKIE
QVEQLGTTESNVGVDEKTGAQEKGLIVKKASEDEVVQLKVHAYLGFFSVLISSVKGDLGQ
LQMKQLEAGMLMLTDRIEVTARMKDFSVTDGVMDVLYPKIVSIVNEEVFYVKVVVFNNAT
NGDNYANMEKVDTQFLMNVGRIRVVFLYGFIRKLLNFLSNFNQAQEAIQNAGSAAAQTAT
QSLQEYNKNSPRIKLDISIQAPFVIIPVSSCSDRALVVNFGNLEVHNNFEIVKGDMDKEI
VVVDKMNVSFTSLQLSVAIISEDETVAAQRTIVQPMSMVVTLLRSLSSWYHDIPDVDVTA
KLHAFKIDIGTDDVRTILDITSQNLTEGSDLIDFVDDTDSSSVSSLSVFNDPDVVVVLNE
DDKTWVSVKFQFNIEKITTRYYQNIQPLVLGNVSTLDHAKDDIIGSSSLDYLNVIGSLLT
NGAMETSVVIRMITLKDKRSAHEKGVTTMIERRYDEKDEQSNELNMIDVKFTQTKELEKK
VNILVNSISIIVNVEFLLVLSRVFTDSFDENAHKDVESKAIAEAKILSTELASPSTGTPN
VVNNSSSLEVKLLVKKPEIYFLADAKLANTNTLIMKNNLDVTLTTVDKKIWFQTNLQDIH
VVTASFEKSRRDISQADVLRMKHVNLIFNSSSIGSSSVGINASTAYLNISPAFVGIASAV
VSSISPSKAEDGEGAGDDVPNLFKTTDIDYSRKWYLKPVARGQLVPGSRVFARAPDAISY
SPGLLTSMDKRMSVIMDDASTTWSYDVNDVRGVVLDQTPLIKEIAVNQLVIALIKEGEPM
KVGVVTKVIQDQEEPTIFIRFSAEQEEEKPLDLVRLIKNVNIGGLRNQLVVSSSVWARLS
DNQIYAPGFISKKDWRYQVKFTNGTYVYHFINDPLGVARDRVPRRENLKVGCDVIAPIPS
KPLMQSGRVKRVTIGGCEIQFDNGALHEVSFYDLRLMRVPKKEGNRLTLRTLLWAKYSDD
FYYRGYIDDIDNKIHVRFLRKG
NT seq
6009 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttgaaagccacgttgttagtattttgaacaatgttcttggtcaatatgtcgaa
aatttggactcatctcagtttcaaatgagtatttggggaggcgatgtaaagctcgaaaat
cttgtttttaaggaaaatgctttggatgtacttaacttgccattgaagattgttcgggga
catttgggcaagcttgttttgaaaatcccgtggaagaacttatattctgagcctgttgtt
gcaagagttgatgaagtctacattcttgcaagaccaaacactcatatgaaatatgatgct
gagaaggaagaaaagcttgttcaggaaagaaagcaaaatgagctcactgctatagaagat
gcaataagatatgctgaggaggccaaaaaaaaaactaaagatgaccacgaaaaaaattta
agttttactgaaaaactagccttgcatattgtgaaaaatattcaggtgtttgtgagcaat
atccatgtcagatatgaagatatggtttcgagtgaggataataccttctcccttggtgta
actcttgaaaatcttacagctcagtcagtaaatgatgaatggaaacctgatatggttgat
cctaaacaaagtttggtgaacaagcttgtaaaaatgaataatttatcagtatatattaat
actggtgatgttattggaaaagcaccaagtatggatgaatggctgaacatggccaaggct
ggaattgcaactggtaaatttggcatcaatcgacctgagaattatacttatgtcattgag
ccactttcatctgataccaaggcaaaattaaacacaagttctattcccgacatcaacatt
cctaaggtgtttgttgaaatcattatggaagagcttcatgtacaactagcaaaacatcaa
ttcaaaaacgtcatgagattggttgaaaacatggacagattgaagacaaactgccaatat
cgaaaatatagaccatcagttagtgtgaaagaaaataaaagagcttggtggaactatgca
atcatggctattttagaggaagatatcaagagacgatcaaaaaattggtcatgggaatac
atcgtcgaacacagaatgaactgtcataaatacatgaatctatataaaaagaaactgtcc
cgtaagacgatttgtgaaaacactcagaaggaaatcgatcactacgagaaaatattagat
gtgttgaacataaccatttggcgcaggcaagctgagatagagacaaaaaaagaaggtaaa
aattatgagctcaacgaacaaagaaaaaaaagcgaaggtggttggttttcaggcttgttt
cgaaaaaagtcggactcaaaatcagctttaggattgacactcgaggaagagaaagcagag
gagaaaaagttatattctgctattggttacagtgaaaatgaagcaccagacaagttgcct
ccagagtatgttgcatacaaactgaaattcagccaacaaagaatacatattcaactttgc
aatgattcattgaagccagaaatttgcgtatcgaacgtcacgcttacgaatcttttcatg
gaacttggctatagacccggttcactggctgtgagtgttgttggaaaacttgaaaagatg
aatgttcatggttgctctgtggcaaagcaagctgctccagagataataagatcactgcca
ggacactctgatataaaggattacgtttacgcttcgtttgaaacgaatcctcttgatgga
aaagcagatcagagacttcgattaaaagttcagccaatagaaatcctttatgatgcggaa
acaattgaaagtttgatgaattttttcacacttccagaagatgttcaacttgcagaaatc
tcggctgctgcgtattcacaaataaacgggatacgaaatcagtctcgtgcaaatctttca
tacgccattgaaactcgtacgcttcttgatattgacatattcattcattcgccgtatatt
gtcatagcagagaaaggaattttaacagacaattctgcaatattggttgttgaccttggc
agtcttaaagtgagcacagatccatctcaagaacgtttaactaacactaagtcgttgagt
cctgaggaacttgaaactagagtctacgatcgctttgatattgagctcaataatcttcaa
gtaatctatgcaaagccaggtgaaaattggaaagaaatacgttatgaaaaccattcatcc
atgcacgtcttgaatccatttgcaataaacattcagttgtttaaatgtcttgcacctgaa
gatgttcgtttgactcaaatacgttttaatggtcttctttcgatggtgaaaattgacgtc
acagacaaaagactcgacgaattattgaagttggcgttatccattcctattcctggaagt
actcaaaaatcccctgctgcaagtacaccccaggagactatcgtacgcgaagttcagcca
gcagcaaaggtgtccactttaaacgctgtcattgaaacagacatcaaagcagaagtatcc
gaagagacttttggaacacctcccgaatttcctgatcagtacatggaggatttggcccgc
ttggctagtgaagaaagagaagcgatgatgctggcaaaatctgagcaaattaacgtttcc
ttgaagtttgaaattgttcagattaacgtcacattgttaaaaaaagaccagtttggaatt
gagtctcctttgcttgaagtagatctattaaggcttggatcccaagtgtctattagacaa
tatgatctctctgtccttgctaacgtaggtgctgtaacggttaaggagatggtgcatggg
atagatggggaagctttggagcttgtgagtactccggcagatgctgatattctcaatgtg
aagtatatcgaggctggcaaaaatcatccacgttttaaagatgattttaattcgactcta
aaaaatatagatgttcaattgtcccatcttaaggtggtgttgcatcaagaggctctttta
aatattatggcgtttgtcaacagtattttgcctgcaagcgaagaggaaatcaagattgaa
caagtagagcagttgggaacaactgaaagcaatgtaggtgttgatgaaaagactggagct
caagaaaaaggattgattgtgaaaaaagctagcgaagatgaagttgttcagttaaaagtt
catgcatatctaggattcttttccgttttaataagttcagtgaaaggtgaccttggccaa
ctccaaatgaaacaactagaagctggaatgctcatgttgacggacagaattgaagttaca
gcaagaatgaaagatttctccgtaaccgatggtgttatggatgttttgtatcctaagatt
gtttcaattgttaacgaagaagttttttacgttaaagttgtggtatttaacaatgctacg
aatggagataattatgcgaatatggagaaagttgacacacagtttttaatgaatgttggg
agaattcgtgtggtctttttgtatggttttattcgcaaattattgaatttcttaagtaac
ttcaatcaagcgcaggaagcaattcaaaatgctggcagtgctgcagctcaaactgcaaca
caatcgttacaagaatataacaagaattctccacgaattaaactggacatctctatccaa
gctccatttgtaatcatcccagtaagcagttgttcagatcgcgctctcgttgttaatttt
ggtaatctggaagtacataataatttcgagatcgttaaaggagatatggataaggaaatc
gttgtcgttgataaaatgaatgtttcatttacttctcttcaactctctgttgccattata
tctgaagatgaaacagttgccgctcaaagaacaatcgttcaaccaatgtctatggttgtg
acacttctccgtagtctttcttcctggtatcacgatatcccggatgttgacgtcacagcc
aaacttcatgcttttaaaattgatatcggaacagatgacgtgaggactatactggatatt
acatcacaaaacttaacggaaggatctgatctgattgattttgtagacgacacggattca
agttctgtatcatctttgtcagtttttaatgatccagatgtggttgtagttttgaatgaa
gatgacaaaacatgggtttctgtgaaatttcagttcaatattgaaaaaattacaacaaga
tattatcaaaatattcagcctctggtcttaggcaacgtttcaacattggatcatgcaaag
gacgatattattggttcttcgtcattagattatctgaacgtgattggttcgttgcttact
aatggagcaatggaaacgtcagttgttataaggatgataacattgaaggataaaagatcc
gctcatgagaaaggagttacaacgatgatagaaagacgatatgatgaaaaggacgagcag
tctaacgaattaaatatgatcgatgtgaagtttacacagacgaaggaattagaaaagaaa
gtcaacattcttgtgaacagcatttcgattattgtgaacgtcgaatttttattggttctt
tcgcgtgtgtttactgactcgtttgatgaaaatgctcataaagacgtagagagcaaagct
attgctgaggcaaaaatcctatcgacagagcttgctagcccgtcaacagggacaccaaat
gtcgttaataatagctcatcgcttgaagtaaagttacttgttaaaaaaccagagatctat
ttcttggctgatgcgaaattggctaataccaacactctcattatgaagaacaatttggat
gtcactttaacaactgtggataagaaaatttggtttcagaccaacttgcaagatattcat
gttgtaaccgcttcttttgagaaaagtcgccgtgatatttctcaagctgatgtgcttaga
atgaaacatgttaacttgattttcaactcttcgagcattggatcttcgagtgttggtatt
aacgcttctacagcatatctcaacatatctccagcttttgttggcattgcatcagctgtt
gtatcatcaatttctccttctaaagcggaggacggcgagggagctggtgacgatgttcca
aatttatttaaaacaaccgatatagattactcgagaaaatggtacctaaaacctgttgcc
agagggcaactagtgccaggcagtcgtgtatttgctcgagctcctgacgccataagctac
tccccaggacttttaacgagtatggacaagagaatgtctgttatcatggatgatgcttcc
accacgtggtcatatgacgtaaatgacgttagaggggtagttcttgaccaaacaccgctg
atcaaagagattgctgtcaatcagttagttatcgcgttgattaaagaaggggaaccgatg
aaagtaggtgtggttacaaaagtcattcaagaccaagaagaaccaactattttcataaga
ttttctgccgagcaagaagaagaaaaacctcttgatcttgtccgattgataaaaaatgtg
aacattggaggccttcgcaaccagcttgtcgtctctagttcggtttgggctcggctatct
gataatcaaatttatgctccaggcttcatctccaaaaaagattggcgttatcaagtaaag
tttaccaatgggacgtatgtttaccattttatcaacgatcccttgggtgtagctcgcgat
cgcgtgccacgtcgtgagaacttgaaagttggttgtgacgtaatagctccgatcccaagc
aaaccgttaatgcaatcaggtcgcgtgaaaagagtcacgattggtggctgtgaaattcag
ttcgataacggtgccttacatgaagtatccttctacgatctaaggttgatgagagtccct
aagaaagaagggaatcgtcttactttacgaacattattgtgggcaaaatattccgatgat
ttctactatcgtggttacattgatgatattgataacaaaattcatgtgcgttttttacgc
aaaggatga
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