Xenia sp. Carnegie-2017 (soft corals): 124438934
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Entry
124438934 CDS
T08024
Name
(RefSeq) tRNA (uracil-5-)-methyltransferase homolog A-like isoform X1
KO
K15332
tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xen03016
]
124438934
Transfer RNA biogenesis [BR:
xen03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
124438934
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
RRM_1
N6_N4_Mtase
Methyltransf_15
MTS
PrmA
Cons_hypoth95
Methyltransf_32
Methyltransf_11
RRM_PARP14_3
Methyltransf_4
Methyltransf_12
PCMT
TRM5-TYW2_MTfase
Methyltransf_23
Ubie_methyltran
FtsJ
Motif
Other DBs
NCBI-GeneID:
124438934
NCBI-ProteinID:
XP_046845082
LinkDB
All DBs
Position
Unknown
AA seq
611 aa
AA seq
DB search
MESATCNKDDGKFSLDKVTDSMIEAETTTSSKSNENQSVLTYNCTNRHFTTEIFKIEIGN
LPKCYSINNLKKFLVKLNLQPKKIKMVPKRNFAFVTFKCEEDRQNALKTIENFEWKKKIL
TAKVAKAKDDPYEQKKSQGMDEIMQPLDTEKDPQISNVNPLERIRDVVTPLWNMSYEEEQ
SLKCELMAEVLKKLGKELRSVDAAKWVRKNRCEHSGMCCPLEKLCPSPIYESYRNKCEFT
IGPGVNAIDKKIGFRLAAYKDGNFAVVEPWLCSHIPQTMKDAVNLFQRYISESPLNVFDP
GTNEGFWRQLTVRVNRNDNIMCIVQFSPQQDMCESTVESEIEKLRNYLKEQNKLELTCVY
VEITCARKVDDESKNVLRHILGDKHIFEDLGDLKFRISPQAFFQVNTRCAEILYDLIREW
SEITSNTVILDVCCGTGTIGLTIAKNAKRVIGIELCEEAIADAKFNAELNGMRFDNRSLT
EYNIPRMAVSPFSLGISNVEYQCGKAEDVLVKTTSTLEAQESQVVAILDPPRPGCHAKVL
QAVRRCSRINKLIYVSCSPNSVRKDFIALCRPTSKRVKGDPFQIVKAQPIDLFPQTRCCE
LVVLLERQITS
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggaatccgcaacttgcaataaagatgacggtaaatttagtttagacaaggtcacggat
agcatgatcgaagctgaaacgacgacttcatccaagtccaacgagaatcaaagtgtgtta
acttataattgcacgaatagacattttaccacggaaatatttaagatcgagattggcaac
cttcctaaatgctattcaattaacaatctaaagaaatttctcgtgaaacttaatcttcaa
ccgaagaaaatcaaaatggtacccaagcgaaatttcgctttcgtaacattcaaatgcgaa
gaagatagacagaatgcattgaaaaccatagaaaactttgaatggaaaaagaaaatttta
acagctaaggtcgcgaaagcaaaggatgatccatatgaacagaaaaaatcgcaaggcatg
gatgaaatcatgcaacccttggacactgaaaaagatccccaaatatcaaatgtcaatcca
ttggaaagaatacgggatgttgttactccattgtggaatatgtcttatgaagaggaacag
agtttgaaatgtgaactaatggcagaggttttaaagaagcttggtaaagaacttcgatct
gttgatgcagcgaaatgggttaggaaaaatagatgtgaacattctggcatgtgctgtcct
ttggaaaagttgtgtccttcgcctatctatgagtcgtatcgaaacaaatgtgagtttaca
attggtcctggagtgaatgctattgataaaaaaattggattcagactagcggcttacaaa
gatggaaattttgctgtcgttgaaccatggctgtgttcacatatacctcagacaatgaag
gatgcggtgaatctatttcaaagatatatcagtgaatcaccgttgaacgtttttgatccc
ggcacaaacgaaggattttggagacaacttacagtgagagtgaatagaaacgacaatatt
atgtgcattgtgcagttttcgccacagcaagatatgtgtgagagtacggttgaatctgaa
attgagaaactgaggaattatttgaaggagcaaaataaactggaattgacgtgtgtttat
gttgaaattacctgtgccagaaaggttgacgacgaaagtaaaaatgttttgaggcatatt
ttaggagataagcatatatttgaggatctgggtgatttgaaattccgcatatctcctcag
gcattttttcaagtcaacacaagatgtgccgagattttatacgaccttattcgggaatgg
agcgaaataacatcaaacacggtcatattagatgtatgctgtggtacaggaactattggt
ttaactattgcgaagaacgcaaaacgagtgataggcattgagttatgtgaggaagcaatt
gcagatgcaaagttcaatgctgaactgaacggtatgcggtttgataaccgttccctcaca
gaatacaacataccgcgaatggctgtttccccattttctctaggtataagtaacgtcgaa
taccaatgtggcaaagccgaggatgttctggtgaaaacaacgtctactctggaagctcaa
gaatcacaggtcgtcgccattttagatccaccaaggccaggatgccatgccaaagtatta
caagctgtgcgacgatgttcaagaatcaacaagttgatctatgtttcttgcagtccgaat
tctgtgagaaaagatttcatagcgttgtgtcgtccaacgtcaaagcgtgtgaaaggcgat
ccatttcagatcgtgaaagctcaaccaatcgatctctttcctcaaactcgttgctgtgaa
cttgttgttcttcttgaacgccaaatcacgtcttga
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