Xenia sp. Carnegie-2017 (soft corals): 124439298
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Entry
124439298 CDS
T08024
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xen04121
]
124439298
Enzymes [BR:
xen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124439298
Ubiquitin system [BR:
xen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124439298
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH_4
zf-CCCH
zf_CCCH_4
zf-CCCH_2
Torus
zf-CCCH_DUS3L
zf-RING_2
zf-CCCH_3
zf-CCCH_PARP12
zf-CCCH_9
zf-C3HC4
zf-CCCH_RBM22
zf-RING_UBOX
zf-C3HC4_4
Inhibitor_I36
zf-rbx1
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
124439298
NCBI-ProteinID:
XP_046845478
LinkDB
All DBs
Position
Unknown
AA seq
397 aa
AA seq
DB search
MATGISKTDVLCKYFQNGVCQRGENCSFSHDRSTRPDMTCRFYLQGTCSYGANCRFDHIK
ADRKTRQNFEKPKTLVSNEKLFQHLVSERPSKLVSLSKGSTKQCENEKIFNWAEAPTFVP
GTKYQSRNNSSELKNSAIKEDFSYSDVARTGIELTCVDEMTDEEAGTILCPFAAVGTCSD
GDSCPFLHGLRCEVCDCYCLDPNDPEQQKEHRSECMKWLEDDMNYSFAVQKSDEVCCGIC
LDKIRLNPDSKDKRFGILPECNHPFCLTCIRKWRSSSKTKDKFVRACPICRISSGFVIPS
EVWIDDPLEKAKLIKMYKDALSKKPCKYFDTGKGSCPFGSSCFYKHANPDGSIAKVNIRR
YSNSKGESLIVNSSSLWEFIEARDGVSLEELLESLFE
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccggcatcagcaaaacagacgttctatgcaagtattttcaaaacggtgtatgc
cagcgaggtgaaaactgtagtttttctcatgatcgttcaactcgtccagacatgacctgc
agattttacttgcaaggaacttgctcatatggagccaattgtagatttgatcacattaaa
gcagacaggaaaacaaggcagaactttgagaagccaaagactttggtgtcgaatgagaaa
ctgtttcaacatttagtcagtgaacgtccttcaaagctagtttctttaagcaaaggatct
actaaacaatgtgaaaatgagaaaatctttaattgggcagaggcaccaacatttgttcca
ggaacaaaatatcaatcaaggaacaattcttcagagttgaaaaatagtgccatcaaggag
gacttttcgtactctgatgttgcaaggactggcattgaattgacatgtgttgatgaaatg
actgatgaagaagccgggacaattttgtgtccatttgcagctgtcggtacatgtagtgat
ggtgacagttgtccatttcttcatgggttgcgttgtgaagtttgtgattgttattgtttg
gatccaaatgatcctgaacaacagaaagaacatcgtagtgaatgtatgaaatggcttgaa
gacgatatgaattattcatttgccgtgcagaaaagtgacgaagtatgttgcgggatatgt
ttggataagattcggttgaatccagactctaaggataaacggttcgggatacttcctgag
tgcaatcacccgttttgtttaacttgcatcagaaaatggagaagttcatcaaaaacgaaa
gacaagtttgtaagagcgtgtccaatatgtcggatatcatctggatttgttatacctagc
gaagtctggattgatgaccctttagagaaagcgaaactcataaaaatgtacaaagacgct
ctcagcaagaagccatgtaagtactttgacactggtaaaggaagttgcccttttggatca
agctgtttctataagcacgccaatcctgatggttctatagctaaagtgaatatacgccgt
tacagcaacagtaaaggagaaagtttgattgtgaactcctcgagtctttgggaattcatc
gaagcaagagatggtgtaagtttggaggaattacttgagagtctgtttgagtag
DBGET
integrated database retrieval system
