Entry |
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Name |
(RefSeq) protein SMG7-like
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KO |
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Organism |
xen Xenia sp. Carnegie-2017 (soft corals)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:xen00001]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124439313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:xen03019]
124439313
Messenger RNA biogenesis [BR:xen03019]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
124439313
mRNA cycle factors
Common to processing body (P body) and stress granule
124439313
|
SSDB |
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Motif |
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Other DBs |
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LinkDB |
|
Position |
Unknown
|
AA seq |
717 aa
MAPVVFNSSQVFQEAEVLKSTITAKKKDDFSVGGDLWASCQSLQDLYKSILLSDLSYALE
RKVEQELWNCAFKSHIDNMRLQIKERKNNKKSELQALLTLFLETASGFYIQLLNELCLKY
ALDVPGYLHPASLGILYDVNSNRRMRHDKKPPASASYYICQDCLVHLGDLARYRYDTIEA
EVYYRQALQLVPTNGQPYNQLAILASSRGDTLGTVYFYCRSIAAKNPFPAASTNLKKTFS
KTLNQSGKKILTCENIDKAEFVEAFIECHGLVCLGQDLNNAKTLCEKSLSKNQLERDELT
ASDLLKMTSVNIFLLYHVSTFDDADDLSGFAKDRNHESWAIMLDFIMNMFHCFLESIIGN
LGADKKDMDESFLDVVLPAVSTIVLWFRANSPRIFKDETFNKFPIWNSFVHIVNQFSVDI
CMKKIDSTLPEDQELQGFLPLVNVLRKSDVNMKQTSKTAELMERKKRLVDFGVYLSRHSS
GIIVCEKKEDGGYRFECINVSDKRLGSSTPFSETSSLFGQTIISPSQGVQNETPSSVHDQ
VGQYSLFQSNWNVPLTLGSTVAPNLISATPTSSNHPIKPSTVSSEIEDSAPRVTSRVVGS
HRSPTIPNVSLPIPPTSLAVGSNRPLSPGHRASPSPSVEKFQPPSSFGLNFTLGSWSPLG
NMTSNGHHDNGGNGTGGGKSLSNGNGNSFWGSSFHSAQSSMSPLEQLLKEQKSQQTS |
NT seq |
2154 nt +upstreamnt +downstreamnt
atggcgcctgttgtttttaattcatcgcaagtttttcaggaagccgaagtgttgaaatct
actatcacagcgaagaagaaagatgatttttctgttggtggtgacttgtgggcatcctgc
caaagtttgcaagatctttataagtcaatcctgctgagtgacttaagttatgctctggaa
agaaaagttgaacaggagttatggaactgtgcttttaaaagtcatattgacaatatgaga
ctgcaaataaaagagagaaagaataacaagaagagtgagctgcaagcattgcttacattg
tttctggagaccgccagtggattttatattcagcttctcaatgaattatgtttgaaatat
gctttggacgtgcctggttatcttcaccctgcatctctgggtattttatatgatgtaaac
agtaacaggagaatgcgacacgacaagaaaccgcctgccagtgcgtcatattatatttgt
caagactgcttggttcatctgggtgatcttgcgcgttaccgttatgacaccatcgaagct
gaagtctactacagacaagccttgcagttggttcctacaaatggtcaaccttacaatcaa
cttgcgattcttgccagttcacgtggggacacattaggaactgtctatttttattgcaga
agtatcgcggctaaaaatccattccctgctgccagtaccaatcttaagaagacattcagt
aaaactttaaatcaatcaggaaaaaaaatcttgacttgcgagaatatcgataaggcagaa
ttcgtcgaagcattcattgaatgccatggattggtttgtctaggacaagacttgaacaat
gctaaaactttgtgtgaaaagtcattgtcgaaaaatcaactggaacgtgatgaactgacc
gcaagcgatctactcaaaatgacttctgtcaacatatttctgctgtatcatgtcagcact
tttgacgatgcagatgatcttagtggtttcgccaaggatcgtaaccatgaatcttgggct
atcatgttggatttcataatgaatatgtttcactgctttctggagtccattattgggaat
cttggagcggataagaaggatatggacgaatcgtttcttgatgttgtcttgcctgccgtt
agcactattgtactgtggttcagggcgaattctcctcgaattttcaaagatgagacgttc
aataaatttccaatttggaattctttcgtgcatatcgtaaatcaattctccgtagacatt
tgcatgaaaaagattgattcaactcttcccgaagatcaagagttgcaaggatttcttcca
ctcgtgaatgttttaaggaaatcggatgtaaatatgaaacaaacgtctaaaacggctgaa
ttaatggagaggaagaaaaggcttgtggactttggcgtttacctttctcgccattcgagt
ggaattatcgtttgtgaaaagaaagaggatggcggttatcgattcgaatgcataaatgtt
tctgacaaaagactgggctcaagcacaccattctctgagaccagttcattatttggtcaa
acaataatctcaccctctcaaggtgttcaaaatgaaactccttcctcggtacacgatcaa
gttggacagtattctttgtttcaatccaactggaacgttcctttgactttgggtagtaca
gttgcgcccaatcttatatctgcaacaccaacttcatcaaaccaccctataaagccatcc
accgtttcatccgaaattgaagattcggcacctcgtgtaacatcacgtgtcgtcggaagt
caccgcagtcccacaatcccaaatgtgtcccttcccattccccctacctctctggcagtt
ggaagtaatcgacccttatcacctggccatcgggcctctccatcacccagtgttgaaaaa
tttcagccaccttccagttttggcttgaatttcactctaggtagctggtcccccctggga
aatatgactagtaatggtcatcatgataatggaggtaacggcacagggggagggaagtct
ctctctaatggtaatggaaattccttttggggaagtagtttccattctgctcaaagtagc
atgtcccccctggaacagcttctaaaagaacagaaaagccagcagacatcgtag |