Xenia sp. Carnegie-2017 (soft corals): 124439361
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Entry
124439361 CDS
T08024
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xen03009
]
124439361
Ribosome biogenesis [BR:
xen03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
124439361
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
BUD22
Motif
Other DBs
NCBI-GeneID:
124439361
NCBI-ProteinID:
XP_046845541
LinkDB
All DBs
Position
Unknown
AA seq
2734 aa
AA seq
DB search
MGRSTNIFRFISFTERISKLRIDVVHKIEKRSDIPDESDTFFNQSLSKWRELNCCLDFQE
FYKGVSPLVKSLSLLVHHQKSVIDILQKYLKKKDTLALEALLQLCVELARDLQGDFTQYF
RDFLGIITKHLDTKDAEKIENCFKTLAYLFKFQWRFLIKDMKSLFRSYSPLLSGNQPGQV
DRFAAESLAFLVRKSKNLSKLLDFIFLSTLQNPQILPGVGRLLSEMLRGVQNRFHSSAEE
IMKLLLNKLAPDVIFDEEFKSGNKIFQLFTIMFEETAKFAKREHCQVIWSCLYKAINDRL
LDNDVNVVNSEILRYLVELMNIWVEWSHGKLINDATKLQKNVSNLIKTKTDHDTLKSSIF
KLASSTLKLSFDIDEDLEEQLLVSFFASKHFSISDACNFSRNLKMWAKFNDLVLPRLVNF
FDAKLAVSSLQEFQAIHVVHILAEILLDTISFEEGYDGMTLQKNREFCFPKLADEHDDCW
WNVFFKPETIFNVDEEHIWAALIILPFLRPLKFKTICQSLKNLFDHLNEQGKGSSSTHNT
PRLFVLSQCVKCIAILCKFHSISLEQCLAYHVMFDVFSNYARDVHMLQAFHVYLSILQEQ
SSSNLSCQQNFKDVYACIKENLASHARLVRLLTLKILTTFDQLEATFMQNNDCLKCNIFN
DCLQVELVPLTFQEYRRKLVCAQKLAFSNTRSLPNDIKDGPLRYLIGMLYLNLSTMWDPV
MSLITTYAIEENKMMFWNVFYENLILDPSHSDRNDEVNFQGDGALKEFFCRQFLSFVGPR
EDNRVDKHSFQLLLWKTMAKFPEIVEPRSRQVVPLFLDFFRNECSVLDEAGRVSYQDLTK
SSLHDSDSNSMVPDHVSADHLADIHIDPTDGEHITTDSELDTNDLNNKRNGHVVFVNDGG
KKRSGSKYNKIMTKAGRSMKMKTLTACLTLFGLFKNPRKIYEESEMMRVYLTLLTQKDGE
IQKLSLACLMTYKFEYMMPYRENFDRLMEDKTFSDEIMCFSSDEELNVVIPEHREQVIHI
LIRILYGKMQRWTGVGTRGKSGGNARRSLVLRFLNSCHGEEMGVFMDLITHNFKDICDNE
NVDVCLSQVVPLRKQLGFLNMFTQIMAVLGSQASYYLPRLLKILFYCLRTSRDCLGQREK
VTPGAVSNLRSVRQLAIRCLSIFFERFPDQDFGLHTLDNSFQLAIAPQVLKLSSEALQTP
TPLLRLLNVCSKNTRLHCLLSRIPTGTQDCVLGHVFQCLTSDHVCTPVATMVLEMVDRLM
SPANEGKQLMSNKMIAKDKNITPHSCQQVLPYVSIILEYLNKRIRRTTKNLSKMKGKLCK
THLVTKTELSVLSRISPYIVDSDQSLHLCRLMVSILNMTNKEESKVEMLQSIKNLLKNVQ
DPMIFYSQFSRLFSSLHSREARKELCHIFSIIALKNDVISEHAQLLHGLNAWNRRQVDEV
DYETRLSSFSQSSKLVKLPEAKGELIMPLFLNATHTVFTTTDLALRYSALGFMKNVIDVI
EEKNDDTDCNWFNVIVLGCLFPAIREAVQSRHEAARNEMVLILGRLVKTFHHSKLNELKV
LWNNDPEVDFFENIVHIQIHRRVRALRRLSSTCANTTFSSHTLTSIILPLVSHFVFEYKA
VKDHNLVTEAINTIAAISTQLPWSKYSSLLRHYLRLLTRDKEMQKVISRVVVSILDSFHF
DLRSLKEEDINGVDIVKCQQSESKEKMEEMDGQQSESKEKMEEMDDQQSESKEKIEEMDD
QQSGNNEEQDETEDIEEESGDPHEDSSFELKLKIHAVITSKILPQLHKCLMKKLDSNDFH
RLSGRKEDDENEMLRVPMVLAMVKLLQALPQKTLESNLPGLLMRVCQALKSRAFDVRETA
RETLSKITNSLGLYYFPFILNELRSSLTRGYQIHVLSASLFYILNKFQENISDGGLDVTI
NNIVEILVEDLFGEPAKEREIDKIATKLPEARTTKSFDSFEIVMGKISPAQLMTVITPLK
HVLDEASNHKISLRVEEVLRKLSVGLQRNLLFVPEKMLIFVHNLVTERLPLMKPDVKGLP
VVHDEQDERLKPSNTYLIPLQPLRGGKVAEVNHRANTYILINFGLQLLHTALKRQKLMAT
EEKHCNMLDPFVSILTNALKSNHVKITTISLRCICWIVKYPLPSLRQHVVHIAARLFKLL
KNHAKTGGASGDNEEMVLSSFKTITVLIRDYVELNVTEQQLRILLTFVEEDLYDHNRRSC
AFPLLKAILSRKLQVSEINDVMLKVSELSIVNDSQSARLQCRQVLLQYLLDYPVGKKMKR
YMEFFIQQLQYEHASGRESALEMLISIVNSFPEKVVFLYSGLFFLPLCTRLVNDESANCR
KLTAVAVKTLIGKLDLERRDNLFRIVMTWMDDEKMSLQRLASHVCGLFVNVEGKSFERRV
PEVLPKLFTILKPENYNLKSKQAEKNSDNVLINAVMCLMKITQECSILSGKESLKISNSA
WDSILCHLTYPHTWVRLISSRLFGLLFSQHSPEDIATISKDSSPHEYLSLDIKKKIASLC
EAFLEQLKSQHVDEDLGDQIVKNLFYLSKVIILMNKDDVNYGLNDDTEDSEEVNNVTLLW
LLRKLSNIAKYESSQTPKLIQKRLSVFRWIAAIASHLGSENISSYLPEMLKPVHRELDHG
SNSVDEKLRGLALEVVELLKNIVGHEVFSKAYATAKQCASDMKTKRKMQTAFEMVANPEA
SVAKKMKRNLAKRENRKRKFESKKAFKKSKKLKI
NT seq
8205 nt
NT seq
+upstream
nt +downstream
nt
atggggagatctacaaatatctttagatttatttccttcacagaacgcatatcaaaactt
cgtattgatgttgttcataagattgaaaaacgttctgatattcccgacgaatctgacaca
ttttttaatcaaagtttatcaaaatggagggagttgaattgctgtctcgactttcaggaa
ttttacaaaggcgtctctccgctggtgaaaagcttatcactgttagttcaccatcaaaaa
tctgtcattgacatactccagaaatatttgaagaagaaagacactttagctcttgaggct
ttgcttcaactatgtgttgaactggctcgtgatttacaaggagattttacacagtatttt
agagactttttaggtattatcacgaaacatttggatacgaaggatgccgaaaagatcgag
aattgtttcaagacgttggcgtatctttttaagttccaatggagattcctaattaaggat
atgaaatcattattccggtcatacagtcctcttctcagtggaaatcagcctggtcaagtt
gacagatttgctgcagaaagtctggcatttctagttcgaaagtctaaaaatttatccaaa
ttattggacttcatatttctctctacattacaaaaccctcaaatactaccaggagtgggt
aggttactatctgagatgttacgtggtgtgcaaaatagattccattcttcagcagaggaa
attatgaaattattgctgaataaactagctcctgatgtcatctttgatgaagaattcaaa
tctggaaacaagatttttcagctatttacaataatgtttgaagaaacggcaaagtttgcc
aagagagagcattgtcaagttatttggagttgtttatataaagctataaatgatcgtctt
ttggacaatgatgtaaatgtggtgaactctgaaatactaagatatttagttgaattgatg
aacatttgggtggaatggagtcatggaaaattgatcaacgatgcaaccaagttacaaaag
aatgtgagcaatttgataaagacgaaaactgaccatgatactttaaagtcatcaattttt
aaactggcttcatcaactctaaaactcagttttgacatagatgaagatcttgaagaacag
ctgcttgtttcgttctttgcttcaaaacacttctccatcagtgatgcctgcaacttttct
cgtaatctcaagatgtgggcaaaatttaatgatcttgttttaccaaggcttgtgaatttt
tttgatgcaaagttagctgtatcttccttgcaagagtttcaagctatccatgtggtacat
attttggctgaaattttgttggatacaatctcatttgaggaaggttatgatggcatgaca
cttcaaaaaaatagggagttttgctttccaaaactggccgatgaacacgatgattgttgg
tggaatgttttcttcaaacctgagacaatatttaatgttgatgaggaacatatatgggca
gcattaataatattacctttcttgaggccactcaaatttaagactatttgccaatcatta
aaaaatctatttgatcatttgaatgagcaaggcaaaggttcgtcatcaactcataataca
cctcgcctgtttgttctttctcaatgtgtcaaatgtattgccatcttatgcaagttccat
tcaatttccttggagcaatgtctggcttatcatgtcatgttcgatgttttcagcaattat
gcacgcgatgttcacatgctacaggcgtttcatgtctatttgtcaatactccaagagcag
tcttcatccaatctgtcttgtcagcagaactttaaagatgtgtacgcttgcataaaagaa
aatcttgcttcacacgcccggctggtcagactgctaacattgaagatcctcaccactttt
gatcaattggaggcaacattcatgcagaacaacgattgtttgaagtgtaatatttttaac
gactgtttgcaagttgagcttgtacctttgaccttccaagaatatcgtcggaaattggtc
tgtgcacaaaaactagctttttcaaacactcgttcattaccaaatgatattaaagatggc
ccgttacgctatctcattggtatgctgtatttgaatttgagtacgatgtgggatcctgtg
atgtccctcattaccacgtatgcgatagaagaaaacaagatgatgttttggaatgtgttt
tatgaaaatcttattttggatccttctcattccgacagaaatgacgaggtgaacttccag
ggtgacggtgcccttaaagagttcttttgtcgtcagtttttgtcttttgtgggacctcga
gaagacaacagagttgacaaacacagctttcaacttctcttgtggaaaacaatggccaag
tttcctgaaattgtagaaccacgatcaagacaagttgttccgttatttttggacttcttc
agaaatgaatgttctgttctcgatgaagccggtagggtctcttatcaagatttgacgaaa
agctctttacatgattcagattctaattcaatggtacccgatcatgtcagcgctgatcac
cttgcagacatccatattgatccaactgatggcgagcatataacgacggattccgaacta
gatacgaatgacctgaataataaaagaaatggtcatgtagtatttgtaaatgatggagga
aagaagagatctggttccaagtataataaaattatgacaaaggcaggacgttcaatgaaa
atgaagacattaactgcttgtctcactctctttggattgttcaaaaacccacgaaaaatt
tatgaagaatctgaaatgatgcgcgtctacttgactttgttgacacagaaagatggcgag
atacagaaattgtctttggcttgtttgatgacgtataagtttgaatatatgatgccttat
agagaaaactttgatcgtttgatggaagataagacgttttctgatgaaatcatgtgtttt
agttctgatgaagaactaaacgttgttatacctgaacacagagaacaagttattcatatc
ttaataagaatactttatggtaaaatgcaacgatggactggtgtgggaacccgtggcaaa
tctggtggtaatgcaagacgttcattggtcctacgttttctcaatagttgtcatggtgaa
gagatgggtgtttttatggatctcatcactcataatttcaaagatatctgtgataacgag
aatgtggatgtatgtttaagtcaagttgtgcccctgcgcaagcaattaggatttctaaac
atgttcacacagataatggcagtgcttgggagccaagcctcatactacttaccgcgtctg
ctcaagattctgttctactgtctaaggacgtctagagattgcttaggacagcgcgagaag
gtaacacctggggccgtgtctaatctcagatctgttcgtcaactggctattcgttgtctt
agtatttttttcgagagattcccagaccaagattttggtttgcacacattggataacagc
ttccaattggctattgctccacaggtattaaagttaagctccgaggcacttcaaacaccc
acgcctcttcttcgtctactcaatgtttgtagcaagaacaccagacttcattgtctgctt
tctcgtattcctaccggcacacaggattgtgtacttggtcacgtgtttcaatgtttgacg
tctgatcacgtgtgtactcctgttgcaactatggtattagagatggtagatcgcctaatg
tcgcctgctaacgaagggaaacagctaatgagtaacaaaatgatcgcaaaagataagaat
attactcctcatagttgtcaacaagttcttccctacgtttctataattcttgagtatttg
aataaacgcatccgacgtacaacgaaaaatctttctaaaatgaaagggaaattgtgtaaa
acacatcttgtaacgaaaacagaactttctgtactgtcacgcatcagtccttatatcgtt
gactcggatcaatctttgcatctctgtcgtcttatggtgtctatcttgaacatgacaaac
aaggaagaatcaaaagtcgaaatgctacaatcaataaaaaatcttctgaaaaatgtccaa
gatccaatgatattttatagtcagttttccagattgttttcctctcttcactcccgtgaa
gcgcgaaaagaattgtgtcacatattttccattattgctctcaagaatgatgtaatatcg
gagcatgcgcagctcttacatggtctcaacgcttggaatagaagacaagttgatgaagtt
gactatgaaacaaggttatcgtcattttcacagtcttcaaagttagtaaaattaccagaa
gcgaagggagagttgatcatgcctttattccttaacgctactcacacagtatttaccaca
actgatctagccctaaggtacagtgctctgggatttatgaaaaatgttattgatgttatc
gaggagaaaaacgatgatacggactgtaactggttcaatgttattgtcttgggttgtctg
tttcctgctatacgtgaagctgtccaatcacgtcatgaggctgctcgtaatgagatggtt
ctcattcttggacgtttagtaaaaacttttcatcactcgaagttaaatgaactaaaagtt
ctctggaataatgaccctgaagttgatttttttgaaaacattgttcatatacaaatacat
cgtcgtgtcagggcattgagaaggctttccagcacatgcgcaaatacgactttctcaagc
cacacactaaccagtataattctaccacttgtctcacattttgtgtttgagtacaaagcc
gtcaaggaccacaatcttgtcactgaagctatcaacaccatcgctgccatttcaacacag
ttaccatggtccaaatattcttcgttattacgtcattatctcaggttgttaacacgtgat
aaagaaatgcagaaagttatatcaagagttgttgtttcaatactggattcatttcatttt
gatttgaggtcgttaaaagaagaagacattaatggcgttgacattgtgaaatgccaacaa
tctgaaagtaaagaaaagatggaggagatggatggccaacaatctgaaagtaaagaaaag
atggaggagatggatgaccaacaatctgaaagtaaagaaaagatagaggagatggatgac
caacaatctggaaataatgaagaacaagacgaaactgaagatattgaagaggaatctggg
gatccacatgaggattcctcttttgagttaaagctaaaaatccatgctgtaattacttcg
aaaatcttaccacaacttcacaaatgtttaatgaaaaagcttgattcaaatgactttcat
cgtttaagtggacgtaaagaagatgatgaaaacgagatgttacgtgtacccatggtgtta
gctatggttaaattactgcaagcattgcctcaaaaaaccttagaaagtaatcttccaggt
ttacttatgcgagtgtgtcaagctttaaaaagtcgcgcgtttgacgtacgtgaaacagca
agagagacactttccaagattactaactctcttggtctttattatttccctttcatattg
aatgaacttcgaagttccctgacaagaggttatcagattcacgttctttcagcatcgtta
ttttatattttaaataagtttcaagaaaatatttcagatggaggtctagatgtaactata
aataatattgttgagattcttgttgaagatctttttggagaaccagcgaaagaacgtgag
attgacaaaattgccacaaagctacctgaagcacgaacgacgaagagttttgacagtttt
gaaatcgttatgggaaagatctctcctgcccaattaatgacagttataactcctttaaaa
catgttttagatgaagcgtccaatcacaagatatcccttcgagttgaagaagtattgcgc
aaattgagcgttggtttacagagaaatcttctgtttgtacctgaaaagatgttgattttt
gttcataatttagtcactgagaggttacctctaatgaaacctgacgtaaagggactaccc
gtggttcacgatgagcaagatgaacgattgaaaccttcgaacacctatcttatcccattg
caacccttgcgtggaggcaaggtagcagaagtgaaccatagagctaatacttatatcttg
attaattttggattacagctgttgcacactgctttaaaaagacaaaaattaatggcgacc
gaggagaaacattgtaacatgcttgatccgtttgtttccatacttacaaatgctctcaaa
tcaaaccatgtcaaaataacgaccatttctttacgttgtatttgttggattgttaaatat
cctttaccttcgttgcgacagcatgtcgtacatattgctgctcgtttatttaaacttctc
aagaatcacgcaaaaacggggggagcttcgggtgataatgaagaaatggtgttgtcatca
ttcaagactattaccgttctcattcgcgattatgttgaacttaatgttacagaacaacaa
ctgaggattttgctaacattcgttgaagaagatttgtatgaccacaacagacggagctgc
gcatttcctttgttgaaggcaatattgtcccggaaattgcaagtttctgaaatcaatgat
gtaatgcttaaagtgtctgagctctcaattgtaaatgattcacagtcagcgagacttcag
tgtcgacaggttttattacaatacttactggactatcctgttggtaaaaaaatgaaacgt
tacatggagtttttcattcaacaactgcaatatgaacacgcaagcggtcgagagtcagct
ttagaaatgttgatatcaattgttaattcctttcctgagaaagtggtgttcttgtattct
ggcctattttttcttccgctgtgcacaaggcttgtaaatgacgagtcagctaactgtcgg
aagcttacggcagttgctgtcaagactttgatcggaaaacttgatcttgaacgtagagat
aatttgtttcgcattgtaatgacttggatggatgatgaaaagatgagccttcaaagattg
gcgagtcatgtctgcggtcttttcgtgaacgtcgaaggcaaatcatttgaacgtcgtgtt
cctgaagtattaccgaaattattcacgattctaaagccagagaattataatttgaagtct
aaacaggccgaaaaaaatagtgataatgttttgattaatgcagtgatgtgtctcatgaaa
ataacacaagaatgctcaatcttgtcgggaaaagaatcactaaaaatatccaacagcgca
tgggattctatattatgccatttgacatacccacacacttgggtccgtttgatatcatca
cgtctttttggccttctcttctctcagcattcacctgaagacatagctacaatatctaag
gattctagcccacatgaatatttgagtctagatataaagaaaaaaatcgcctcgctatgc
gaagcgtttctggagcaactaaaatcgcaacatgttgatgaagatttaggtgaccaaatt
gtcaagaatctgttctatttgagtaaggttataatattaatgaacaaagatgacgtgaat
tatggactaaatgatgacacagaggattcagaggaagttaataatgtcactttattgtgg
ttattaagaaaattgtcgaatatagcaaaatacgagtcttctcaaacaccgaaactcatt
caaaagcgtttgagtgtatttcgctggattgctgcgattgcttctcatcttggcagtgaa
aatatttcttcctatttacctgaaatgttaaaaccagttcatagagagttggatcatggc
tcaaattccgttgacgaaaaattgcgaggtttggcgctagaagtcgttgaactgcttaaa
aacattgttggtcatgaagtattttcaaaagcttatgctactgccaaacaatgtgcgtct
gatatgaaaacaaaacgtaaaatgcagactgcgtttgagatggtagctaatcccgaagca
agtgtagcaaagaaaatgaaacgaaatttggcgaagagagaaaacagaaaaagaaaattt
gagtcaaaaaaagcgtttaaaaaatcaaagaaattgaagatatga
DBGET
integrated database retrieval system
