Xenia sp. Carnegie-2017 (soft corals): 124439755
Help
Entry
124439755 CDS
T08024
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen04140
Autophagy - animal
xen04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124439755
04148 Efferocytosis
124439755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xen04131
]
124439755
Membrane trafficking [BR:
xen04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
124439755
Hops complex
124439755
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
124439755
NCBI-ProteinID:
XP_046845974
LinkDB
All DBs
Position
Unknown
AA seq
828 aa
AA seq
DB search
MGHVTADWTPLGDVFYRTVELYVMAWKGEIDITKHHIAAAHYGGPIALCKKQMYIPGVKP
LIYIYSAAGRLMAEINWDGVNLVQMGWSVFEDLLCVAEDGTIYVYTLLGDFKRVITTGQE
AKESKVIDCRFFSSCMGTGITMLTGKYCFYTINNLQEKRIRKMASPQGLDAPPNSWITIP
EERGSRVLVAVESFLFSLTIENVVKLNPEISSEINAITEMALSVNNKYLALFADTGLVWI
GSSDLKTVYCEFNTRQTSRPEQLAWCGNGALICYWQFQYMMIGPDKDVDTRFLDDDIYMV
PEIDGIRIISNEKHEFLQKVPSVVENVFKIGSFESGAMLYEAMKEFEKKSAKADEYIRMI
KDKLSEAAKQCIQAAGSEFEQTLQRSLLRAASFGKSFVTESEPHQKFVEMCQMLRVLNAV
RDYIVGVPLTLVQLEKMSIPVLIDRLVLRRQYCLAIRISNYLKIPKRDGESRILAHWACF
KVQQTNKDDEDIAQAIALKLGDAPGISYTEIASKALNCGRTQLAINLLNYESKAEDQVPL
LIEMKKNQLALEKAIESGDTDLVYMVVMKMKAKNEQIKELLKTLRPFPVALSLFIKYCKE
QELRTLESLYLIDDQFLNLANLHLHNSYMTVEMDKKIECLRKSASYFSQGNLLFPKQAID
EHIKLLEKQKVFEEQLRFPGLIGLSVSDTIFELVNKGKDKEAEQFRKEFKVPDKRYYWLK
LRALAKAHEWVKLDEFCKSKKPPIGYEPFFEACFEYDNLKEAEKYISRVPIEERMKCYVR
VGNIEQAAIVAFNQKNEEALNSLLGRCGTNRTLISKIDSMKAQLSQKR
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgggtcatgtgaccgcagactggacaccacttggtgatgttttttacagaactgttgaa
ctgtatgtcatggcatggaaaggcgagattgacatcacaaaacatcatattgcagcagcg
cattatggtggaccaattgctctgtgcaagaagcaaatgtacatacctggagtaaaacca
ttgatctatatatactcagctgctggaagactcatggctgaaattaattgggatggtgtt
aatcttgttcaaatgggatggtccgtgtttgaagacttactgtgtgttgctgaagacgga
acaatttacgtgtatacgttgttgggagattttaaaagagtcataaccacaggacaggaa
gccaaagaatctaaagtgatagattgtagatttttctcaagctgcatgggtacggggatc
actatgttaactggaaaatactgtttttatacaataaataatttacaagagaaaagaatt
cgaaagatggccagtccacaaggtctcgatgctccccccaacagctggatcacgattcct
gaagaacgaggatcgcgtgttttagttgctgttgaaagctttttattttctctcacgatt
gaaaatgttgttaaattaaatccagaaatttcgagcgaaattaacgcaattacagaaatg
gcgctgtctgtgaacaacaaatacttggcactttttgctgacactggtttagtatggata
ggatcgtcagatttaaaaactgtttactgtgaatttaacacccggcaaacctcgcgtcca
gagcagcttgcttggtgtggaaatggagctctgatctgttattggcaatttcagtacatg
atgattggaccagacaaagatgttgatactcgttttctcgacgacgatatttatatggtg
cctgaaattgacggaattcggattatcagtaacgaaaagcacgaattccttcaaaaagtt
cctagcgttgtggaaaatgtatttaagattggttcgtttgagtcaggggccatgttgtat
gaagcaatgaaagaatttgagaaaaaaagcgcaaaagctgatgagtacattcgtatgata
aaggataagctgtcggaagctgcaaaacagtgtatacaggctgcaggatctgaatttgag
caaacattacaaagaagtttattgcgcgcggcttcatttggaaaaagtttcgtcactgaa
tctgaacctcatcaaaaatttgtcgaaatgtgccaaatgttacgagtgttgaatgctgtt
cgtgattacatcgttggtgttccactgactcttgtccaattggaaaaaatgtctattcct
gtacttattgacaggttggttttgcgaagacagtattgtctagctattcgcataagtaac
tatttaaaaatccctaaacgcgatggagaaagcagaatattggctcactgggcttgtttt
aaggtgcaacaaacgaacaaagatgatgaagacatcgctcaagctatcgctctaaaactt
ggtgatgcacctggtatatcatacacagagatagcatctaaagccttgaattgtggacga
actcaattggcaatcaatcttttgaattatgaatccaaagcagaagaccaagtcccactg
ttaattgaaatgaagaaaaatcagttggcattagagaaagcaatcgaaagtggtgatact
gatttagtatatatggtagtgatgaaaatgaaggctaaaaacgagcagataaaagaatta
ttaaagaccttaagacctttccctgttgctctgagtctctttatcaagtattgtaaagaa
caagaacttaggacattggaaagtctttatttgattgatgatcaatttcttaaccttgca
aatcttcatttgcataacagttacatgactgtggagatggacaaaaagattgaatgtttg
agaaaatctgccagttattttagccagggaaatcttttgttcccaaagcaggcaattgat
gaacatatcaagttattagaaaagcagaaagtttttgaggaacagttaagatttccagga
ctcattggattatccgttagtgatactatttttgagttagttaataaaggtaaagataaa
gaagcagaacaatttagaaaagaattcaaagttcctgataaaagatattactggttgaag
ttgcgagctctagctaaagctcatgagtgggtgaaacttgatgaattctgcaaaagtaaa
aaacctcctataggatacgagccgttttttgaagcatgtttcgagtacgataatttgaaa
gaagcggaaaagtatatttcacgtgttcccattgaagagcgaatgaaatgttacgtaaga
gtcgggaacatcgagcaagcagccattgttgccttcaatcaaaagaatgaagaagctctg
aacagccttttgggacgttgcgggacaaataggacacttatctcaaaaatcgattcaatg
aaagcgcagctttctcagaagagataa
DBGET
integrated database retrieval system
