Xenia sp. Carnegie-2017 (soft corals): 124439910
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Entry
124439910 CDS
T08024
Name
(RefSeq) LOW QUALITY PROTEIN: protein patched homolog 1-like
KO
K06225
patched 1
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
Patched
MMPL
Motif
Other DBs
NCBI-GeneID:
124439910
NCBI-ProteinID:
XP_046846154
LinkDB
All DBs
Position
Unknown
AA seq
1416 aa
AA seq
DB search
MEQEQPRERYLCWADFSLREVVEGRARGNRRSLWLRARMQMFLFKGGCYAQTHSVQVIMI
GLLFLVAFALCLYKAKVETNVEKLWMKVGGRLEEELAYSKAYGYDYKSYEVVIQTPRVKG
RNVLTKNSMLTHAEVLKKAMKVEVEVFEQTWSIQDICAKPSVPQFHPWIDKMMEKLIPCT
VITPLDCFWDGAKIHPQNITNIILKQPIQWTTFDPTYFVNHVSSYVKENLDITKMKSMLT
EAGISHGYLNKPCLNPNDPRCPNMAPNKKSRKALDIGETVTGGCTGFAEKMMIWPEEMII
GGTRKNKSGYIKRAHALQSVINLMSEEEIHQWWRDANGFTKDKVQHLAEGWTVEAAKLVL
NTWQRKFVKVVNDFSEEKYTTQKVMAFSTTSFNDLLNSFSKPNLALIIGGYTLMILYACF
TMVRCNSVVQSQGCMGILGVLLVSLSVAAGLGLCSLAGIDFNVASTQVLPFLALGLGVDD
MFLLSHAYRDLNSKNLRTKEYAGYCLSTTGVSIMLTSITNAAAFFFAAIIPIPALRALCI
KAGVVVIFNFFSIVIIYPAMIAIDVKRREDDRYDIFCCVKRDTTTEVTHLDQKQLLHWLP
TTKQQMTIIKYSSANVTLGQSQGYILPGVALRASANCNINNTICKSMLGGNVMSLPEMGN
FVVSVSSSGQIVEGDSSQNANAKINANYKRGKGLDINASSSAICSRHNHNRKSKNIPSKI
NHGCSRENLDNTPNFNAQSKVNVAMPPHKVSPIFEKNPQQSEIHVTADASAHNEGSCSNS
TNAEVILRPNNIQRSRQRSVAWERTMNSKLVKTITRLSVGDLTKMYYTPLLKKNSVKIFL
LILFATILSISIYGFIQVQDGVDLTDVVPKESKLAEFLKARNEHFSFYDIFIITKADFDY
PNNQEMLTRLHEAFKKVDFIVKERDKKLPKFWLIYFRDWLISLQKAFDKDWENGAITYTE
CYPNATSDGKLARRLLLGTGEPQETSQLQTQKLVRENGIINERGFYSFLRAWYRMDPMGY
ESSLVKIKPSLDDWNEDDDKRRVRPAEKIKYARMPFYVNGLKETSDYVKLIKQVRAVCDR
FTAEGLPNYPRGAPFTFWEQYIWLRWQLLITVSVVLAASFLIISTILVNIWAGTIVVVIL
ALTAIELFGFLGLAGIKLSAIPAVTLVFSVGVGVEFTVHLCMVFVSSVGTRVERTQQALD
SVITPVVNGAVSTILSVVMLAGSEFDFVVKYFFHVLALLILIGFFNGVVLLPVILSLIGP
NPEVVPIPTSNFGSTTTSWIGLTSFDRNACSSTSNLTTLGKTETSKNSLDTDYATLQNME
NCTSKKTAEQLDGKKDLNRKDTSPKQFYGKTLPSLTESKKVKPSRNIAEVTATATVTVKL
PVELKQEKTEKFHDNQAIIPHHATDLKVLDLEEEYV
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
atggagcaagaacaacccagagaaagatatttatgctgggcagacttttctctgcgcgaa
gtagttgagggtcgcgcaaggggaaaccgacgctccttgtggcttcgtgcaagaatgcag
atgtttctttttaaaggtggatgttacgcacagactcacagtgtacaggttatcatgatt
ggtttgctgtttcttgttgcattcgcgttatgtctgtataaagcaaaagttgagaccaac
gtagaaaagctttggatgaaagttggcggacgtctggaagaagagctagcttactctaaa
gcgtacggttatgattataaatcgtatgaagttgttattcaaacaccgagagtaaaagga
agaaacgtactcacgaaaaattcgatgttaacacatgctgaggtgctgaaaaaagcgatg
aaagttgaggtggaagtttttgaacagacatggtcaatacaggacatttgtgcaaaacct
tctgtaccacaatttcatccatggatagataagatgatggaaaagctaattccatgtaca
gttataactcctttggattgtttttgggatggtgcaaaaattcacccacaaaatataacg
aatataatacttaaacaaccaattcaatggacgacgtttgatccgacatactttgtaaat
catgtttcaagttatgtaaaagaaaatttagacattaccaaaatgaagtcaatgttgaca
gaggcaggaatctcccatggttatctaaacaaaccgtgtctaaatcctaatgacccccgt
tgtccaaacatggcacccaacaaaaaaagtcgaaaggctttagatatcggagaaactgta
actggtggctgtacgggatttgctgagaaaatgatgatttggccagaagaaatgataatt
ggtggaactagaaaaaacaaaagtggttatatcaaaagagcgcatgcgttacaaagtgtg
ataaatctgatgagcgaagaagaaatccatcaatggtggagagatgccaatggattcaca
aaagacaaagttcagcatttagctgagggatggactgttgaggcagctaagctcgtcctt
aatacctggcaaaggaaatttgttaaagttgtaaatgatttttctgaagaaaaatataca
acgcaaaaagtcatggcattttcaacgacatcatttaatgatcttctaaatagtttttcg
aaacctaaccttgccctcattattggtggatataccttaatgattttatatgcatgtttc
acaatggttcgttgcaacagcgttgtccaatcacaaggttgcatgggaattctcggagtt
ctacttgtctcattatctgtggcagccggtcttggtttgtgttcactggctgggattgat
ttcaatgttgcttcaactcaggttcttccatttcttgctctgggtcttggtgttgacgac
atgtttcttctgtcacatgcatacagagatctcaacagcaaaaatctcagaactaaggag
tacgctggatattgtctgagcactacaggagttagtatcatgttgaccagtatcacaaat
gctgctgctttcttttttgccgccataatacccatcccagcattgagagcactatgtatc
aaggctggtgttgttgttattttcaactttttctccattgtcattatctatcctgcaatg
atcgccattgatgtgaagagaagagaagacgaccgttacgatatattttgttgtgtaaaa
agagatactacaacagaagttacacatctcgaccagaaacaacttcttcactggctacct
acaacgaaacaacagatgacgattatcaaatattcatctgccaacgtcactttaggacaa
tctcaaggttatattttacctggcgttgccttgagagcttcagcaaattgtaacataaac
aacacaatatgcaaaagtatgcttggaggaaatgtgatgtctttgcccgagatgggaaat
tttgttgtttccgtatcatcaagtggtcaaatcgtcgaaggtgattcctcccaaaacgcc
aacgctaaaattaatgcgaattacaaacgaggcaaaggactcgacatcaacgcatcaagt
agtgccatatgcagtcgacataatcacaacagaaaatctaaaaacataccatcaaagatc
aaccatggatgctccagagagaacttggataacacaccaaacttcaacgctcaaagtaaa
gtcaatgtagcaatgcctccacataaagtatcaccaatttttgaaaaaaacccgcagcaa
agtgaaattcatgttactgctgatgcttcggcccataacgaaggttcttgttcaaattca
acgaatgctgaagttatactaagacctaataacatacaaagatctcgacaacgcagtgta
gcctgggagcgaacgatgaattcaaaacttgtgaagactataaccagattaagtgttgga
gatttaacgaaaatgtactatacaccactgttaaagaaaaattctgtcaagatattcctt
ctcattctgtttgcgactatcttgtccatttcaatctacgggtttattcaagtacaagat
ggtgttgatctaactgacgttgtcccaaaagaaagtaaactagcagagttcttgaaagct
agaaatgagcatttctcgttttatgatattttcatcattacaaaagctgactttgattat
ccaaataaccaagaaatgttaacaagacttcacgaagctttcaaaaaggttgatttcatt
gtgaaagaaagagataaaaaactaccaaaattctggctgatttattttagagattggctt
attagtttacaaaaagcgttcgataaagactgggaaaacggagctattacttatacggaa
tgttatcctaacgcaacaagtgatgggaaattagctcggagattactgttagggacagga
gaaccccaggaaacttctcagcttcaaacacaaaaactggtacgagagaatggtataatt
aatgaacgaggattctacagtttcttgagagcctggtatcgcatggatcccatgggatat
gagagttctttggtaaaaattaaacctagtcttgatgattggaatgaagacgatgacaaa
agacgagttcgtccggctgaaaaaatcaaatatgctcgaatgccattctacgtcaacgga
ctgaaagaaacgtcagattatgtcaaattgattaagcaagtacgagcagtatgcgacaga
tttacggcagagggtcttcccaactaccccaggggtgcgcctttcacattttgggagcaa
tatatttggttacgctggcaattattaattacagtctcagttgttttggcggcgagtttt
ctaattatctcaaccattcttgtaaatatctgggctggaacaatagtggttgtaatactg
gctttgactgctattgagctgtttggattcctaggattggctggtattaaactaagtgca
atcccagcagtcactctggttttctctgtaggagttggtgtggagttcacagttcatctt
tgtatggtgtttgtctcttcagttggaacaagagttgaaagaacacaacaagctttggac
agtgttataacgccagttgttaatggagcggtgtcaactatccttagtgtggtcatgttg
gccggctcagagttcgattttgtcgtaaaatatttctttcacgtgttggcactcttgatt
ctgattggtttcttcaacggagtcgtccttcttccggtcattttgtcgctcattggtcct
aaccctgaggtcgtgcctattcctacgtcaaactttggctcgactacaacatcctggata
ggtctgacatcctttgatcgtaacgcgtgcagttcaacttcaaatttaacgacgttaggc
aaaacggaaacctccaaaaattccttagatacagattacgcgacattacagaatatggaa
aactgtacatctaaaaagacagcagaacagcttgatggtaaaaaagatctgaatagaaaa
gacaccagtcctaaacaattctacggtaaaactcttccttctttgacggaaagtaaaaaa
gttaaaccatcacgtaacattgcagaagttacagcaacggcgacagttacagtaaaactt
cctgttgaattaaagcaagagaaaacagagaaatttcacgataatcaggcgattattcct
catcacgcaactgaccttaaagtgttagatctagaagaagaatatgtataa
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