KEGG   Xenia sp. Carnegie-2017 (soft corals): 124439968
Entry
124439968         CDS       T08024                                 
Name
(RefSeq) splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
xen  Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xen00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124439968
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xen03041]
    124439968
   03036 Chromosome and associated proteins [BR:xen03036]
    124439968
Spliceosome [BR:xen03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    124439968
 Complex B
    124439968
 Complex C
   U2 SnRNP specific factors
    124439968
Chromosome and associated proteins [BR:xen03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    124439968
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N HEAT_2 Htt_N-HEAT_1 HEAT_ECM29 XMAP215_CLASP_TOG CEP104-like_TOG RRP12_HEAT UME HEAT_Maestro UNC45-central
Other DBs
NCBI-GeneID: 124439968
NCBI-ProteinID: XP_046846232
LinkDB
Position
Unknown
AA seq 1324 aa
MATSLARPALTREDIERQAQDIVDKKAGKAPTDNTDLVGLTSQGYFDTDIYGSSSSKFDG
YEASIPTNEAEEDDDDYSASALGQGKRARYTAPVALLNDIPQGEQYNAFAEHKQPTIAER
EDEYRARRRAMIISPERNDPFLEAISLKTPDPSQMKGRSYPDILMEQRMRKEEVETRKEI
LEKAKSGELQVKVPAKPVEKKRRRWDQQQGGDDEAPVAKKKSGTWDQSAETPGGGTRWDE
TPGRVKGSETPGGSTTPHRGAETPGATPSARMWEATPSHATPGSTTPGSMTPGHSTPGVS
TRRNRWDETPKTDRGTPGHTTPGQATPGWAETPRTDRTGAQTPGATPTPGSKRRSRWDET
PSAQMGGGTPLVNASGITPAGAQAMNMSTPTPGQMISITPEQRQVFRWEKEIDERNRPLT
DDELDAIMPKEGYKILDPPPGYQPLRTPSRKLTATPTPMGFSGFTMQTEDRNAKLVEDQP
PGNLPYLKPDDVQYFDKLLVDVDESTLSAEEQKERKIMKLLLKIKNGTPPMRKAALRQVT
DKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPFVHKILVVIEP
LLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALG
IPSLLPFLKAVCRSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQK
VRTITALALAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAE
YANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCATDGVEPQYIKDEILPEFFKHFWQ
HRMALDRRNYKQLVDTTVELANKVGASDIIGRVVDDLKDENEQYRKMVMETIEKIMGNLG
ASDIDSRLEEQLIDGILYAFQEQTQEDIVMLNGFGTVVNALGKRVKAYLPQICGTVLWRL
NNKSAKVRQQAADLISRIAQVMMTCGEEKLLGHLGVVLYEYLGEEYPEVLGSILGAIKAI
VNVIGMNKMQPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEHVSAREWMRICF
ELLELLKAHKKAIRRAAVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVA
ETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDR
DLVHRQTACSAIKHMSLGVFGFGCEDALAHLLNYVWPNIFETSPHVINAVTDAIEGMRVA
LGAPKVLQYALQGLFHPARKVRDVYWKIYNTLYIGAQDSLVAGYPTVVDDDKNNFVRGEL
MYFL
NT seq 3975 nt   +upstreamnt  +downstreamnt
atggcgacaagtttagcgaggccagctcttaccagagaagatatcgagcgacaagcacag
gacattgttgataaaaaggctggaaaagctccaacggacaatacagatttggttggattg
acttctcaaggatattttgatactgatatttatggatcaagttcaagcaaatttgatggt
tatgaagcttcgattccaacaaatgaagctgaagaggatgatgatgattattctgcaagt
gcactgggccaaggaaaaagagcaagatacacagcacctgtggcgttacttaatgacatt
cctcaaggagaacagtacaatgcatttgctgaacacaaacaaccaacaattgctgagaga
gaagatgaatatcgtgcaagaagaagggctatgataatatccccagaaagaaatgatcca
ttcttagaagcaataagtttaaagacacctgatccttctcaaatgaaaggacgaagctat
ccagatattttgatggaacaacgaatgaggaaagaagaggttgaaactcgaaaggaaatt
cttgaaaaagctaagtctggagaacttcaagtaaaggttccagctaaacctgttgagaag
aaaagacgtcgttgggaccaacagcaaggtggtgatgatgaagcacccgtggcgaaaaag
aagtctggtacctgggatcagagtgctgaaacaccaggtgggggaacacgatgggatgaa
acccccggtcgtgttaaaggtagtgaaactccaggtggaagcactacaccacaccgtggt
gctgaaacgcctggtgcaactccaagtgcaagaatgtgggaagctactccaagtcatgct
acacccgggtctacaacaccaggcagtatgacacctggtcactctaccccaggtgtgtca
acgcgtcgaaacagatgggatgaaactccaaagacggaccgtggaacacccgggcacaca
acccccggtcaagcaacgcctggatgggcggagaccccacgtactgaccgtactggcgca
caaacacccggggcaacaccaacccccggaagtaagagacgatcgagatgggatgaaacg
ccatcagcacaaatgggtggtggtacacctctagttaatgctagtggtataacaccagct
ggagctcaagctatgaatatgtccactcctactccaggtcaaatgatttcaattacccct
gaacagaggcaggtatttcgatgggagaaagaaatagatgaaagaaacagacctctaact
gatgatgaattggatgcaataatgcctaaagaaggctacaagatattagatcctcctcct
ggatatcagccattacgtacaccatcacgaaagttaactgcaactcctacaccaatgggc
ttcagtgggtttaccatgcagacagaggatcgaaatgctaaattggttgaagatcaacca
cctggaaatttgccgtatcttaaacctgatgacgtccagtattttgacaaactattggtt
gatgttgacgaaagtacgcttagtgctgaagaacagaaagagagaaagattatgaaacta
ttgttgaaaattaagaatggaactccgccgatgagaaaggctgcattacgacaagtgact
gataaagcccgcgagtttggtgctggtccattgtttaatcaaatccttccattactgatg
tctccgactcttgaagatcaggagcgtcatttattggttaaagtcattgatcgtattttg
tacaaattggatgacttagttcgaccttttgttcacaagattcttgttgtcatcgaacct
ttattgattgacgaagattactatgcaagagtggaaggaagagagatcatctcgaatttg
gctaaggctgcaggtttggctacgatgatctccacaatgagacctgacattgataatatt
gatgaatatgttcgtaacacaactgccagagcgtttgctgtggttgcatctgctttgggt
attccatctctgttgccttttctgaaagctgtttgtcgaagtaaaaaatcctggcaagct
cgtcacactggcataaagattgttcaacagattgcaattttgatgggttgtgctatatta
cctcatctgcgtagcttagttgaaatcattgagcacgggcttgtcgatgaacaacagaaa
gtaagaacaatcacagctcttgctttggctgccttagccgaagctgctactccatacggc
attgaatcgtttgacagtgttcttaaacctttatggaaaggtattcgacaacacagagga
aagggtttagctgcttttcttaaagctattggttatcttataccattgatggatgccgaa
tatgcgaactattacaccagagaagttatgttgatcttaattcgtgaatttcaatctcct
gacgaggaaatgaagaaaattgtattgaaggtagtcaaacagtgttgtgcaacagatggt
gttgaacctcaatatatcaaggatgaaattttaccagaattctttaaacatttctggcaa
catcgtatggcattagatcgtcgtaattacaaacagcttgtggacacgactgttgaattg
gctaataaggttggtgcttcggatatcattggtcgtgttgtggatgatctcaaggatgaa
aatgaacaatacagaaaaatggttatggaaacaattgaaaagattatgggaaaccttggc
gcgtccgacatcgattctcgtcttgaagaacaacttattgatggtatattatatgcgttc
caagaacagactcaggaagatattgttatgttaaatggttttggcactgttgtaaatgct
cttggcaaacgtgtcaaagcatatctccctcagatttgcggaacagttttgtggcgtcta
aacaataagtcagctaaagttcgtcaacaagctgctgatcttatatcgcgtattgcacaa
gttatgatgacttgtggagaagagaaattgcttggacatttgggtgttgtattgtacgaa
tatcttggcgaagaataccctgaagttttgggaagcattctaggtgctatcaaagcaatt
gtgaatgtcattggtatgaacaaaatgcaacctccaatcaaggatcttttgccacgatta
acacctattctcaaaaacagacatgagaaggtccaagagaactgtatagacttggttggt
cgtattgctgatcgcggtgctgaacatgttagtgccagggagtggatgagaatttgtttt
gaattacttgagttactaaaggcccataagaaggcaattcgtcgagcagctgtgaacacg
tttggttatattgcaaaggccataggacctcaagacgtacttgctacattgctaaataat
ctaaaagtgcaagaacgccaaaatcgtgtttgtacaacagtcgccattgctatcgtcgct
gaaacatgctctccattcactgttcttccggctttgatgaacgagtaccgggtacctgaa
ttaaatgttcaaaatggcgttctcaaatcgttgtctttcttgttcgaatacatcggtgaa
atgggaaaagactatatttatgctgttacgccacttttggaggacgcattaatggacaga
gatttagttcatagacagacagcttgctctgcaatcaaacacatgtcgttaggcgtattt
ggatttggctgtgaagatgcacttgctcatttattaaattatgtttggccaaatatcttc
gaaacatctcctcatgtcattaacgctgtcaccgatgcaattgaaggcatgagagtggca
cttggcgctccaaaggtcttgcaatatgctttgcagggtctttttcaccccgcacgtaaa
gtcagagatgtttattggaagatttataacactttatacattggtgcccaggactctctt
gttgctgggtatcccactgtcgtcgacgatgacaaaaacaatttcgttcgtggagagttg
atgtactttttatag

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