Xenia sp. Carnegie-2017 (soft corals): 124440142
Help
Entry
124440142 CDS
T08024
Name
(RefSeq) LOW QUALITY PROTEIN: NFX1-type zinc finger-containing protein 1-like
KO
K27391
NFX1-type zinc finger-containing protein 1
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
ZnF_RZ-type
AAA_19
AAA_30
ResIII
SLFN-g3_helicase
nSTAND3
DEAD
PhoH
AAA_22
AAA_16
AAA
CDC45
AAA_18
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
124440142
NCBI-ProteinID:
XP_046846427
LinkDB
All DBs
Position
Unknown
AA seq
1484 aa
AA seq
DB search
MQVRFLGDLPDFKSGEIYEMVESPGYYEAYCHNLEGLQEISDEKMPLGRYLVQCKTIVNP
PKYITVHEMAPPIHPEFAVADNDVLPISPRYNLQGVLRSMDARSVQILEPESWPRADSVS
LNQSQMNAIQAALTEEFVVIQGPPGTGKTYVGLKIVQALLQNQDYWRTNQMSAGPMLVVC
YTNHALDQFLEGILQFNQNDVVRVGGRSNSDLLKPFNLSNKARRTAAWHLASNELDMTER
SIKERKNCIQKANERKLKFEDLITVIDEREANQLLPYVYFAEFYGTTVLDAWLNMQHLPF
CASDSQNMNEKIFENHVFNKRENDLTDDDDDEDSNEEEDDEDTDEDSNDDKEDEDTDEDS
NEEKEDEDTDEIITVDVEKDAEIITVDVEKDAEIITLDVEKDAERLQNERILNDEFAPVQ
QYEDDIKIHMTQDQLNLVNVQARSNAFEEKQGNGHWQEMRDLSLWELDLNTRLQYYQHWS
NLYHEMHNRKLEELYQEYETACRKFKEIKHGQEEDTLRKATVIGMTTTGAAKYRNVLQMI
RPKIVIVEEAAEVLEAHIVTALSEGVEHLILIGDHKQLKPNPCVFTLAKQYNLEVSLFER
MVRNGMKCHTLDTQHRMRPEIARLMKFIYQDLKNHSSVERFDDVMGISKNIFFINHQEAE
QSNDELKSHSNDHEANFIVALCQYLLQQGYGPSTITVLTTYTGQLLHLKRLMPKTKFEGV
RLCTVDNFQGEENDIILLSLVRSNEEKKIGFLGISNRICVALSRARKGFYCIGNISMLAE
KSNLWHKIMKDLEVQGAIGAALPVYCQNHKNTKFGMRSAQDFKKVPQGGCTLPCDYRLDC
GHKCEMVCHPADREHKEYDCKKLCKKEVCPQHQCRRKCHHGEPCGPCREIVTKKLPKCGH
EVKMQCGQDPSLFNCPKPCERILECGHSCQATCGEICSKRKCKEIVDRILFCGHKKSFEC
WLPIEECKCFEPCDTLLECGHKCQGNCHDCKQGRIHIVCKHPCGRTLICSHPCDEPCTND
CPPCQRKCENRCIHSACGKKCGEPCAPCQEPCTWQCKHKKCTKKCSEICDRMPCNVKCRK
KLPCNHRCVGLCGEKCPRLCRICDKDELXKIFFGTEDRHGARFIELLDCHHVFEVTALDQ
WMSLAEEESSGIQLKACPKCKTPIRKSFRYGNLIKKVLQDIETIKSKVRENGANIEQRKK
ELKAQLSEISSKYPDPLHPLDQNRNRRSRRPLIPFRKNLIDATSSVFFEIETEINNVDSN
QKLDVISYKIQLLRPIYEIKARFISRLQEKIPLQSQIMELETLVLKCDKLTSQLIADVQQ
EIQRTALACKLKVLQEDIKKYNKTVSYEQQLKLDAISSLFLSPRKINNDIRESAIRDLDQ
ISQDLQLGAITAEEKAEIVKAMGLTKGHWFKCPNGHIYAIGDCGGAMERGKCPECHAVIG
GENHTLEADNQLASEMDGARHPAWSNQVNLVNYDPEELRALQFF
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtccgttttcttggtgatttacctgattttaaatctggtgaaatttatgaaatg
gttgaatcacctggctattacgaggcctattgccataacctcgaaggactacaggaaatt
tctgacgaaaaaatgcctttaggtcgttatcttgtccaatgcaaaacaattgttaatcca
ccaaaatacattactgtccatgaaatggcaccaccaattcaccctgagtttgcagtagca
gataatgacgtattgccaattagcccaagatataatcttcaaggcgttttacgttcaatg
gatgcacgatccgtgcaaattttggaacccgaaagttggccaagagccgacagtgtttct
ttgaaccaatcgcaaatgaatgcaattcaagctgctctaactgaagagtttgtagtcatt
caaggtccaccaggcactggaaagacgtatgttggtctcaagatcgtgcaagctttgtta
caaaatcaggattactggcgtacgaaccaaatgagcgccggaccaatgcttgttgtttgt
tatacaaaccacgccttagatcagtttcttgaaggtattcttcaatttaaccaaaacgat
gttgttcgtgttggtggtagaagcaacagtgatttgttaaaaccttttaacttgtccaat
aaagctagacgaactgctgcttggcatttagccagtaacgagcttgatatgactgaacgt
agtatcaaagaaagaaaaaactgtattcagaaagctaacgagagaaaacttaagtttgaa
gacttgattacagtcattgatgaacgcgaagctaaccaattattgccttatgtgtatttc
gcagaattttatggaactaccgttcttgatgcctggcttaatatgcaacacttgccattc
tgtgctagtgactctcagaacatgaacgagaaaatttttgaaaatcacgtcttcaataag
agagaaaatgatttgactgacgacgacgatgatgaagatagtaatgaggaggaggatgat
gaggatactgatgaagatagtaatgacgacaaggaggacgaggatactgatgaagatagt
aatgaggagaaggaggatgaggatactgatgaaataattactgtagatgtggaaaaagat
gcagaaataattactgtagatgtggaaaaggatgcagaaataattactttagatgtggag
aaagatgcagaaagattgcagaatgaacgcatccttaatgatgaatttgctccagtgcaa
cagtacgaggatgacataaaaatacatatgactcaagatcaacttaacctcgttaatgtt
caagcaagatctaatgcatttgaagagaaacaaggaaacggccattggcaagagatgaga
gatctcagtctatgggaattagatttaaacacacgtcttcaatattaccaacattggtcc
aatctttaccatgaaatgcataacaggaaattagaagaactttatcaagagtatgaaact
gcgtgcagaaaattcaaagaaattaaacatggacaagaagaagatacgttacggaaagcc
actgtaattggaatgactacaactggagcagctaagtatagaaacgttttgcaaatgatc
agacccaaaattgtaattgtagaagaagctgccgaggttttagaagcccatattgttact
gccttgtcagaaggagtggaacacttgattttgattggagatcacaaacaactgaaacct
aacccgtgtgtctttacgcttgcgaagcagtacaatcttgaagtatctttgtttgagcgt
atggtaagaaacggaatgaaatgtcatacactagacacacaacaccgcatgcgtcccgag
atcgctcgtttaatgaaattcatttatcaggatctaaaaaatcattcaagtgtggaacgg
tttgacgatgtcatgggaatttccaagaatatcttctttattaatcaccaagaagcggaa
cagtcaaatgacgaacttaaaagtcactcaaacgatcatgaggcaaatttcattgttgct
ttatgtcagtatttgctacaacagggttacggtccatcaactattactgttcttacaact
tatactgggcaattgctgcatctcaaacgtcttatgcccaaaacaaaatttgagggtgtt
cgtttgtgtactgtcgataactttcaaggggaagaaaatgatataattttgttgtccctt
gtccgtagcaatgaagaaaagaaaattggattccttggtatttccaaccgcatttgtgtc
gccctatctcgtgcacgcaaaggattctattgtattggaaacatctcaatgttagctgaa
aagagcaatttatggcacaaaattatgaaagatctcgaagtccagggagccattggagca
gctttgccagtttactgtcaaaatcataaaaatacaaaatttggaatgaggagcgctcaa
gattttaaaaaggtacctcaaggtgggtgtactcttccctgtgattaccgtcttgactgt
gggcacaagtgtgagatggtgtgtcatccagctgatcgcgaacataaagagtatgattgt
aaaaaattgtgcaaaaaggaggtgtgtcctcaacatcagtgccgtagaaaatgtcatcat
ggagaaccctgtggtccttgcagagagatagttactaaaaaactcccgaaatgtgggcat
gaagtaaaaatgcaatgcggtcaagatccttctttattcaactgccccaaaccgtgtgaa
agaatcttggaatgtggtcattcatgtcaagctacttgtggcgaaatatgctcaaaaagg
aaatgcaaagaaattgttgacagaattttattttgtgggcataaaaaatcatttgaatgc
tggcttcctattgaagaatgtaaatgctttgaaccttgtgacactttgttggagtgtggg
cacaagtgtcaaggtaattgccatgattgtaagcagggtcgtattcacattgtctgtaag
catccatgtggtcgtacgctgatttgctctcatccatgtgacgaaccatgtacaaatgat
tgtccaccttgtcaacggaaatgcgaaaatcgttgtattcatagcgcatgcggaaagaaa
tgtggagaaccgtgtgcaccatgtcaagaaccatgcacgtggcaatgtaagcataaaaag
tgtactaaaaaatgttcggaaatttgtgatcgcatgccatgtaatgtaaaatgtcgtaaa
aagttgccatgcaatcacagatgcgttggattatgtggtgaaaaatgcccacggctatgt
cgcatttgtgacaaagacgagcttncgaaaattttctttggcactgaagacaggcacggt
gcaagatttattgagcttttggactgtcaccacgtttttgaggtcactgctctcgatcaa
tggatgtcccttgccgaagaagagagctcaggcatacaactcaaggcttgccccaagtgt
aaaactccaataagaaagagctttcgttatggaaatcttattaaaaaggttttgcaagat
attgaaactatcaaaagtaaagtcagagagaacggtgccaacatagagcaaagaaagaaa
gagttgaaagcacaactgtcagaaattagttctaaatatcccgaccctttacatccatta
gatcaaaaccgcaaccgtcgaagtaggagaccattaattccatttagaaaaaacttgatc
gatgcaacatcttcagttttctttgaaattgagactgaaataaacaatgtcgacagcaat
cagaaattggacgtgatctcttataaaatacagcttcttcgacctatttatgaaatcaaa
gcaaggttcatatcgcgcttacaggaaaagatacctcttcagtcgcagattatggaacta
gaaacattggtgttaaagtgcgataaattaacgtcgcagctgatcgcagatgtacaacaa
gaaatccagcgaacagcgttggcgtgtaagttgaaagtactccaagaggatataaagaag
tataacaagacagtgtcttatgaacaacaattaaagcttgatgcaatctcgtcgttattc
ctctccccccgtaaaattaataatgatatcagagaatcagctatccgtgatctcgatcaa
attagtcaggatctccaacttggtgcaattaccgctgaagaaaaagccgaaattgttaaa
gcgatgggcttaacaaaaggccactggttcaagtgtcccaatggtcatatatatgctatt
ggagattgtggtggcgcaatggaaagaggtaaatgccctgaatgtcatgcagttataggt
ggtgaaaatcacacattagaagctgataaccaattggcttctgaaatggatggtgctagg
catcctgcttggtctaatcaagttaatctcgttaattatgatcctgaagaactcagggct
ctacaatttttctaa
DBGET
integrated database retrieval system
