Xenia sp. Carnegie-2017 (soft corals): 124440215
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Entry
124440215 CDS
T08024
Name
(RefSeq) integrin alpha-8-like
KO
K06584
integrin alpha 8
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen04512
ECM-receptor interaction
xen04518
Integrin signaling
xen04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124440215
04518 Integrin signaling
124440215
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124440215
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xen04515
]
124440215
Cell adhesion molecules [BR:
xen04515
]
Integrins
Integrin alpha subunits
124440215
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FG-GAP
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP_3
Integrin_alpha
NPCBM_assoc
Motif
Other DBs
NCBI-GeneID:
124440215
NCBI-ProteinID:
XP_046846495
LinkDB
All DBs
Position
Unknown
AA seq
1057 aa
AA seq
DB search
MRVISCQSIQMSVLNVLYIFGFFTLCLCYKIEQIDIKTTNAKVFSGREGSMFGYSLTLHS
GKVSPGRDFSGQPTIFVGAPEFEVYGEKGGLLFECVVDGSPCTTQPIETLPESWERRNNQ
WLGATTYSNGNREVVTCAPRFTEYTTNSQGKEFYYLIGKCVVLLGKYRGRITERTLYPCT
LGGAPNHERSDFGYCQAGFSASLKKNQQVVMGAVTFNKRGNVGFETSRFRYKWAPFPAED
GNFYNGYSVTTGNFFALNQEAIASGYPRFEYSGKVRVYRENLDSIIVDIFPPKKVQERNE
FIFFGASVCGIDVNADGFSDLLVGAPFFSDRGDEGRVYVYLSVLSNQNRILELSPNEKTR
QDPGLRGSNTMGARFGWSITRAGDLNNDGILDFIIGAPQDQPDLDGDGFGNGAIYIYHGR
RDGIFNDYQQKITAETVKKFYPNFQQFGYSLAAMVDTNNDLYPDIAVGAWKSDRVLLLRT
RPIMNLDVSLTLSRKEILVENYTVFCPNSSIQCLDVTVCFQYIGKSVSGPYEIQYHFDLD
YQTLQNFNKRVYFNESRNEIYSKRDKIELPGKNVTSCVEFTQIHVQENNLVDRLRLGANS
IGFKINYSLILPPNCENTTLCPILDTSKGSVRTEQATIIVNCTDNECNYDLKTTVSVDEN
EIIIGETNSRKVTVELSSSGEVAYNPTIALTHDPSLQYEDFDVSDRSFRIVPDATLSRPD
YDLFQLQGPLNPNQKVTLEITYSTTAVLGKKKNLEIFVRVNALSGSEINDENNNATISMI
VKRNVKLEITGTTFPKSLNYPEKGPDLNIIDNDYNSVNITSIGPPITITVEVANEGQSDL
EDVKLHISVPLTEKDKEFNYLLYPVSIKGRGDANNAVCSGRALNPANLSLTADSQGRTRR
RRNTETLSPRTMDSGLVTCTIKEIERNCRFVADLNVRLWTATLAAYYPKDLLMIVQFNAE
YVNNLDESKSPHRGHQEVTIRVTPENATGKSKSTPVWVIIVSVLGGVLLLALCIFALFKL
GFFKRNRPPKEISPPQTDEAQQTEVNKIFIFFNLYYW
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttataagttgtcaatcgattcaaatgtctgttttaaacgtattatatatattt
ggtttttttacactttgcttatgttataaaattgagcaaattgacataaaaactacaaat
gcaaaggtgttttcgggaagggaaggttctatgtttggctacagtttgactttacacagt
ggaaaggtttctcctggacgggatttttcaggccaaccaacaatttttgttggtgcacct
gagtttgaagtttatggggaaaaagggggacttttgtttgagtgtgtggttgatggttcg
ccttgtacaacacaacctattgaaacactgccagaaagttgggagagaaggaacaaccaa
tggctaggtgcaaccacttattctaatggaaacagagaagttgttacatgtgctcctcga
ttcacagaatacaccacaaacagccaaggcaaggaattttactacttaattggaaagtgc
gtcgtacttctaggaaaatatcggggcagaattacagaaagaacattgtatccttgtaca
ctaggaggggcaccaaatcacgaacgaagtgattttggttattgtcaagctggattttct
gcttcgttaaaaaagaatcaacaggttgttatgggtgcggtgacgttcaataagcgagga
aacgttggctttgaaacatcgagatttaggtataagtgggcaccgtttcctgcagaagat
ggaaatttttacaatggttactcagtcaccaccgggaattttttcgcgttaaatcaagaa
gcaattgcatctgggtacccaagattcgaatattcaggaaaggttagagtttatcgtgaa
aatttggattccattatcgttgatatttttccaccaaaaaaagtccaagaaagaaatgaa
tttatcttctttggagcttccgtttgtggaattgatgtaaacgctgatggtttttctgat
ctattagttggagccccattcttcagcgacaggggtgatgaaggtcgtgtttacgtatac
cttagtgtactatcaaatcagaatcgaatccttgaactttctcctaatgagaaaacgcga
caagatcctggtttacggggcagtaacactatgggggcaagatttggatggtccataaca
cgcgcaggagatcttaataatgatgggattttagatttcattattggagcacctcaagat
caaccagatcttgacggagatggttttggcaatggcgccatatatatttatcatggacgt
agggatggtatatttaacgattatcagcagaaaataacggccgaaacagtcaagaagttt
tatcctaattttcagcagtttggatactctcttgcggctatggttgacactaacaatgat
ctatatccagatattgcagtcggggcatggaaaagtgatagagttcttttgctaaggact
cgcccaataatgaacttggacgtttcattgactttaagcaggaaggagatacttgtggaa
aattataccgtattctgtcccaacagttctatacaatgtttggatgttacagtgtgtttc
caatacatcggcaaaagtgtctctggtccttatgaaattcaataccattttgatttggat
tatcaaacattgcaaaattttaataagagagtgtattttaatgaatcaagaaatgaaatt
tactccaagcgtgataaaatagaacttccaggcaagaatgttacgtcgtgtgtggaattc
actcagattcatgttcaagaaaacaatcttgtggaccgattgaggcttggagccaacagc
atcggtttcaaaataaattacagtctaattttaccaccaaactgcgaaaatacgacttta
tgtccgattttggatacaagtaaaggctctgttagaacggaacaggctaccattattgtg
aattgtactgacaacgaatgcaattatgatctcaaaacgacagtaagtgttgatgaaaat
gaaataattattggtgaaaccaattccagaaaagtgactgttgaactcagcagttctggc
gaagttgcgtacaatcctaccatagcattaactcatgacccgtcattacaatatgaagat
ttcgatgtatccgatagatcgttcagaattgtgccagatgcaacactaagtagacctgat
tacgatttgtttcaacttcaaggaccccttaatccaaatcaaaaggtgacactggaaatt
acatactcgaccaccgctgtacttggtaaaaaaaagaatctggaaatttttgttagagtg
aacgcgctaagcggaagcgagattaatgatgaaaataacaacgccaccatttctatgatt
gtcaagcgcaatgtcaaactagaaattaccggcacaacttttcctaagtcactaaactat
ccagaaaaaggtcctgatttaaatataatagacaacgactataactctgtgaacattact
tctattggaccaccaataaccattactgtcgaggttgcaaatgaaggtcaaagtgattta
gaagatgtgaaacttcatataagcgtccctctaaccgaaaaagacaaggaattcaattat
cttctgtatcctgtcagtattaagggaagaggtgatgccaacaacgcagtatgcagtgga
agagccttgaatcctgctaacctgtccttaactgcggactcgcaaggaagaactagacgg
agaagaaatacagaaaccctgtcacctcggacgatggattcagggctggtgacctgtaca
atcaaagaaattgaaagaaattgtcgttttgtggcagacttaaatgtgcgactgtggact
gcgactcttgctgcgtattatcctaaagatcttctcatgattgtccaatttaatgctgaa
tatgtcaacaatcttgatgagagcaaatcacctcatcgtggacatcaggaggtcacaatt
cgagtaactcctgaaaatgctactggaaaatccaaatcaactccagtgtgggttattatt
gtctctgtgcttggtggtgttttgttactggctctttgtattttcgctttattcaaactt
ggattctttaaacgaaatcgacctccaaaggagatatcacctccgcaaacagatgaagca
caacagactgaagttaataagatttttatcttctttaatttgtattattggtaa
DBGET
integrated database retrieval system