Xenia sp. Carnegie-2017 (soft corals): 124440301
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Entry
124440301 CDS
T08024
Name
(RefSeq) general transcription factor IIF subunit 1-like isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124440301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xen03021
]
124440301
Transcription machinery [BR:
xen03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
124440301
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
PGP_phosphatase
CarG-like
Motif
Other DBs
NCBI-GeneID:
124440301
NCBI-ProteinID:
XP_046846619
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MVKVFKDASKRHSIMKFNTKVDLSTITKAHLMRERNTVELKEEEMPKFGAGSEYGREQRL
EALRKKRGYSKKKVKDEDLPWLLKIGGKGGKMYKGVKEATMVQNAAYYIFTQADDGSFEA
HPVDSQYRFTPVINYRTLTADEAEEEFSLRNRTINYFSLMVKKRLTDAEEKDEEIVIPKV
KSKVDKLQIYNDDDLLDVSDDEGEEDDQEHMDEEKFKKAKKKLGKTRKSEKDDGGSDFDE
MEDGYEDSKEHDYSENMSSDDEIKIEDDGKPKAEDDLNAQLNPDSEDDSELEEDRLSKGG
LVLKGMLKQNDDSSEDDEDDMDSDEDPTKSAVLLQGQKKKGKKVESASSTSSSSRSGTPV
KGVESADKTIADAANKLKDINPSGKKRTKNSPGDETPSKKARKDTDSPISRAASGSSLSS
RVLNEPERPSSRGAAESGITEEAVRRYLSHKPMTTKDLLKKFKTKKTGLSSGTTVQQIAA
ILKKIVPEQKMIKGKLYLSLKRT
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaagttttcaaagatgcgagcaaaaggcattccataatgaagttcaacacaaaa
gttgatttatccactataaccaaggcccatctgatgcgcgagagaaacacagttgaattg
aaagaagaggaaatgccaaagtttggagctggaagtgaatatggacgggaacaaagattg
gaggcactaagaaagaaacgaggctactccaaaaaaaaagtcaaggatgaggatttgcca
tggcttttgaagattggtggtaaaggtggcaagatgtacaaaggcgtaaaagaagctaca
atggttcagaacgctgcttattacatattcactcaggctgatgatggatcgttcgaagcc
cacccagtcgactcacagtacaggttcactccggtcatcaactatagaacgcttacagca
gacgaagcggaggaggaattttcattgagaaacagaaccatcaactatttctcgctcatg
gtaaagaaaagactaaccgatgcagaggaaaaagatgaagaaattgttattcctaaagtg
aagtcgaaagttgataagctgcaaatctataatgacgatgatctactcgatgtatcggat
gatgaaggtgaagaagatgaccaggaacatatggatgaagaaaagttcaagaaagctaag
aaaaagttgggaaagaccagaaaatcagagaaagatgatggtggtagcgactttgatgaa
atggaagatggctacgaagactcaaaagagcacgattattctgaaaatatgtcttccgac
gatgaaatcaaaatagaagatgatgggaaaccaaaggctgaagatgatctaaatgctcaa
cttaatccagatagcgaagacgacagtgagctcgaagaggatagattaagcaagggaggt
ttggtattgaaaggtatgctgaagcagaatgatgatagttcagaagatgatgaagatgat
atggatagtgatgaagatccaacaaagtctgctgtattactacaagggcaaaagaagaaa
ggtaaaaaggttgaaagtgcatctagcacatcatcaagtagcagatctggtacaccagtt
aaaggtgttgaatctgctgacaagaccattgcagatgctgctaacaagttgaaggatatt
aacccatcaggaaagaagcgcacgaagaactctcccggagacgaaactccaagcaaaaaa
gctcgtaaagatactgatagtccgatatctcgcgcagctagtggcagctctttgtcatca
cgtgttttgaatgaacctgagagaccgtcatcccgaggagccgctgagtctggaattaca
gaggaggcagtccgccgctatctttcgcacaaaccaatgaccaccaaggacttactgaag
aaatttaagaccaagaaaactggcttgtccagtgggacgacagtacagcagatagctgcc
atcttaaagaaaatcgttccagaacaaaaaatgatcaaaggaaaactctatctttcttta
aaacggacctag
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