Xenia sp. Carnegie-2017 (soft corals): 124440324
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Entry
124440324 CDS
T08024
Name
(RefSeq) heat shock protein 60A-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124440324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xen03019
]
124440324
03110 Chaperones and folding catalysts [BR:
xen03110
]
124440324
03029 Mitochondrial biogenesis [BR:
xen03029
]
124440324
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xen04147
]
124440324
Enzymes [BR:
xen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
124440324
Messenger RNA biogenesis [BR:
xen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
124440324
Chaperones and folding catalysts [BR:
xen03110
]
Heat shock proteins
HSP60 / Chaperonin
124440324
Mitochondrial biogenesis [BR:
xen03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
124440324
Exosome [BR:
xen04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124440324
Exosomal proteins of other body fluids (saliva and urine)
124440324
Exosomal proteins of breast cancer cells
124440324
Exosomal proteins of colorectal cancer cells
124440324
Exosomal proteins of bladder cancer cells
124440324
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
124440324
NCBI-ProteinID:
XP_046846654
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MYRLPNVLRTAGLCKRVLNPQLAASLSTSNSCNAKELKLGRDGRSAMLKGVEILAEAVAA
TLGPKGRNVIIEQSFGGPKITKDGVTVAKAVDLADKFQNLGARLVQDVANNTNEEAGDGT
TTATILARQIAKEGFEKVSRGANPQEVRRGVILAVEHVVNQLKEMSKQVTTPEEIAQVAT
ISANGDKTVGDLISSAMKKVGKNGVITVKDGKTLQDELELIEGLKFDRGFISPYFINTTK
GQKVEYQDALLLLCQKKISTIQQIVPALELANTSRKPLVIIAEDIEGEALSTLVINRLKI
GLQVAAVKAPGFGDNRKNMLQDMAIATGGMVFGDDALDTKIEDIKLQDLGEVGEISINKD
DTLLLKGKGSQEDIDARCRQIRDEIEETSSEYEKEKLNERLAKLSDGVAILKVGGSSEVE
VNEKKDRVTDALNATRAAVEEGIVPGGGVALLRCIKQLDGLDAKNEDQKIGIEIVRRAMR
IPCQTIAENAGVESTLVVEKVLTMDHSMGYDAANDEYVDMMQTGIIDPTKVVRTAITDAA
GVASLLTTAEVTIVEAPKEEKDMPMPGGMGGMGGMGGMGGMM
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtcttcctaatgttttacgcactgctggcctttgcaaaagagtcttgaatcca
cagttagctgcatctttaagtacatcaaacagctgtaatgctaaagaattaaagcttggt
agagatggaagatctgctatgttaaagggtgttgaaatcttagctgaagcagttgctgct
acacttggcccaaagggtcgtaatgtgatcattgaacaatcatttggtgggccaaaaata
accaaagatggtgtgacagtagcaaaagctgttgatttagcagataagtttcaaaacctt
ggtgctcgattagttcaagatgtagcaaacaatacaaatgaagaagccggtgatggcaca
acaactgcaacaattttagctcgacaaatagctaaggaaggttttgagaaagtttctagg
ggtgcaaacccgcaagaagttcgacgaggagtgattttggcagttgagcatgttgtcaat
caactaaaggaaatgtccaaacaagttacaactcctgaagagatagctcaagttgcaaca
atatctgctaatggtgataagactgttggtgatcttatttcttcagctatgaaaaaagtt
ggtaaaaatggagtaattaccgtaaaggatggaaaaactctgcaagatgaattagaatta
atcgaaggtctaaaatttgatcgtggtttcatttctccttactttataaatacgacaaaa
ggacaaaaggttgagtatcaagatgctttgctgctcttgtgtcaaaaaaagatttcgacc
attcagcaaattgttccagcgcttgagttagcaaacacctcacggaagcctcttgttata
attgccgaagatatcgaaggggaagcgttgagcacattagtcattaacaggttaaagatt
ggactgcaagttgcagccgtaaaagctcctggatttggcgataacagaaagaacatgttg
caagatatggcaattgcaactggaggaatggtttttggtgacgatgccttggatacaaaa
attgaagacattaaacttcaagatcttggtgaagttggtgagatttctatcaacaaagat
gacactcttcttttaaaaggcaaaggcagccaagaagatattgatgctagatgtcgacaa
ataagagatgaaatagaggaaacgagttctgaatatgagaaggaaaagttaaatgaacgt
ttagcgaagctgtcagatggcgttgctattttgaaggttggtggttcgagtgaagttgaa
gtgaacgagaaaaaagatcgagtgacggacgcactgaacgccacacgtgctgctgttgaa
gagggtattgtgcccggtggtggagttgctttgttaagatgtattaaacaattggatggt
ttagacgcaaagaatgaggatcaaaaaattggtatagaaattgtgcgacgagcaatgcgt
attccctgtcaaactattgctgaaaatgctggtgtcgaatccactttagttgtggaaaag
gtacttactatggatcatagtatgggttacgatgcagccaacgacgaatatgttgatatg
atgcaaactggtattattgatccaacgaaagtagttcgtaccgccattacagatgctgct
ggtgttgcttcattgcttacaacggctgaagttacaattgtcgaagcaccgaaagaagaa
aaagatatgccaatgcctggaggaatgggaggcatgggtggtatgggaggtatgggtggt
atgatgtaa
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integrated database retrieval system