Xenia sp. Carnegie-2017 (soft corals): 124440443
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Entry
124440443 CDS
T08024
Name
(RefSeq) guanine nucleotide exchange factor subunit RIC1-like
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xen04131
]
124440443
Membrane trafficking [BR:
xen04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
124440443
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIC1
ANAPC4_WD40
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
124440443
NCBI-ProteinID:
XP_046846794
LinkDB
All DBs
Position
Unknown
AA seq
1402 aa
AA seq
DB search
MYFSFGWPKYYGFDNIESEQPCRFKFNRDLSILAVLTEKSLTLWYHHPFVVIVSYRRSRK
SLEDYGRNEDCEWKLDSSSIVIKTSNGALIFYGLQLSNGNSGKLYVLENKRNVGSTALSP
LFEIPAILLAEKSVVSITGGVSCLSVKKNEIFVVSHLGILHRVEWDGNIKDNFSLSIFSI
PFILDLETPLESAQYLKGSETNICDMQFSSLLGGFAFVLENGHGGFMSASTSKFEAEDVL
AIWARDLKEAALAKVNHKFRIIAYGCSHGGCMMYSFDELTGALQFTFNSIAFLLLLLLLL
SEPENYYINYLKDSSTSVGSIEKMCFSPDGHVIAISWVNGGLALWTVFGSLLFCTLDSTF
YGSQSDVFTSKPWHISAMEWSVEGYNLILAIEKPVEDKWKGTGEIVHIPFLKSILASNPC
VANHHHLVLQGEVCLYLSAADVVSETRAARHEFCSAENADMESQEGASLQSNAKHWQIVQ
YPQTYVEKNWPIRSVAVDESGMFLAIAGRMGVSHYSWLTRRWKLFGNETQEQSIYCRGGL
LWWNDFLVIACYNFLSEKDEIRFYPRLSNLDNAFASEKTLQCPPFLINVLDNILLVYSSD
CTLAFYLLDKSDGDDRVHVSRLQDISLVSHVPHPLSVIEIMLGMACFDEGSGCAVFGINR
VESLLINVGGKLLMLERLHEKERRKTLQFSAPVILASCVEAIWSSLKTFCSGKQHLVEAL
WLNCGLFGMKVWLPLFPGDDEKPPNFLSKRIMLPIEMSLCPLVVLSEEALVVGAASEPVH
SGFSFSQWELPMSLQEPFPFCTLERPAEVYLHNLLRQLLRRNLGIHALKIARSCSDLRHF
PHVLELMLHEILEEEATASEPLPDAMLPRIVAFIQEFPEYLQTVVYCARKTEVALWSYLF
TAVGNPRDLFQKCLDGGYLETAASYLIILQNLEKPEVSKQLATILLEATLLDDKYEIARD
LVRFLGSIKVSDFDSPTHSPCVKTPVMPTARPSLVDDDEDDLTPLPQGIQQSHSQSTSRI
SVRPPIKRISSSDRLQTQRSYDKSSGCGRSEEKNSTFAKKSDSQEQIEGPEGSQHIVFRY
SSSEAPEGFFLDSILNRHARKLLSNNRLKDLGRFSAYLDFNLRAWLKKERDRAATVNNFV
EAFLSIHRQFESPFPSKATVNSLNTETSKPTIRSKYHSATSSISFGKHKRIDLVTAEDET
APEEVELQSLQVEQSETSSFSLDDDPDELEESTWSYDTNIKDLDDFIGQVPCSRQSDKEI
RFLLQAMSESYCFDWSLLLSLALRDGPLVNQVVQDILLSGIDELALENFIRLRDGIKSLE
NWAQRECQEYSVFFGLFKPQWSALSDAITTVATRLAEARKTSTRVSEQVDVDDENGATFT
EKVNSDISNIGEANDPYECILS
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgtatttttcttttggctggcctaaatattatggttttgataacattgaaagtgaacag
ccgtgccgattcaagttcaaccgcgatctctccattcttgctgttttgacagagaaaagc
ttaactctatggtatcatcatccttttgttgtaatagtatcatatcgccgatcgaggaaa
tctttggaggattatgggagaaacgaagactgtgaatggaaacttgattcttcctctatt
gttatcaaaacctcaaatggtgccttgatattttatgggttgcaactttcgaatgggaac
tctggaaaattgtatgttcttgaaaacaaacgaaatgttggaagtaccgcactctcacca
ttgtttgaaatacctgcaatactactggccgaaaaatcagttgtatcaattactggagga
gtgtcttgtttatcagtgaagaaaaacgaaatctttgtcgtcagtcacctgggtattctt
caccgagttgaatgggatggaaatatcaaagataatttttcgctttcaatattttccatt
ccttttatcttggatttagaaacacctcttgagtccgctcaatatctaaaaggatcagag
acgaacatttgtgatatgcaattcagctctctacttggtggatttgcttttgtcctggaa
aatggacatggtggatttatgtcagcttccacatccaaatttgaagctgaagatgtgctt
gctatctgggcacgtgatttaaaggaggcagcacttgcaaaagtcaaccacaaatttcgt
attattgcgtatggctgcagtcatggtgggtgtatgatgtattcatttgatgaattgacc
ggagcgttgcagttcacattcaattcaattgcatttctcctacttctacttttactactg
tctgagcctgaaaattattatattaactatttaaaagactctagcacatcagtcggatct
atagagaaaatgtgcttcagtccagatggtcacgttatagctatttcgtgggtgaatgga
ggtctggcactatggacagtttttggttcgctgttgttttgcactctggactccactttt
tatgggtcacagagtgacgtatttacgtccaaaccgtggcatattagtgcaatggaatgg
agtgtcgaaggatacaatttaatactggccatagagaaaccagtagaagataaatggaaa
ggaactggtgaaattgtgcacattcctttcttgaaaagtattttggcttccaatccctgt
gttgccaatcatcaccatcttgttctgcaaggagaagtgtgtctgtatttaagtgcagcg
gatgttgtgtctgagactcgagcagctcgtcatgaattctgtagtgctgagaacgctgat
atggagtctcaagagggagcaagtttacagtcaaatgcaaagcactggcaaattgtccag
tatccacaaacgtacgttgaaaaaaactggcctattaggagtgttgcagtggatgagtct
ggtatgtttttggcaatcgctggtcgtatgggggtttcgcattattcttggctcactcga
aggtggaaactatttggtaacgaaactcaggaacaaagcatttattgtcgcggaggctta
ctttggtggaatgatttcttggtcattgcttgctacaatttcctttccgaaaaagatgag
atacgtttctatccacggttatctaatttagacaacgcatttgccagtgaaaaaaccctt
caatgcccgccatttctcatcaatgttttggacaatattcttttggtttattcctccgac
tgtacattagcattctatttattggataaatcagatggagatgaccgtgtccacgtaagt
cgacttcaagatatatcattggtgtcacatgttccccatccgttatcggtcattgaaatt
atgttgggtatggcttgctttgatgaaggttctggttgtgctgttttcggtataaataga
gtcgaatctctgttaataaatgtcggaggaaaattgctcatgcttgaaagacttcatgaa
aaagaaaggagaaaaacgctacaattctctgcccccgtcatacttgcatcgtgcgttgaa
gctatttggtcatcattaaaaacattttgttctggaaagcagcatttggttgaagcatta
tggttgaactgtggtctctttggaatgaaagtttggcttccactttttcctggagatgat
gaaaaaccgccaaatttcctttcaaaaagaataatgcttccaattgaaatgtctttatgt
ccacttgttgtgctatcagaagaagcacttgttgttggggctgcatcagaacctgtccac
tccggattttctttcagccaatgggagctgccaatgtctttgcaagagccatttccattt
tgtaccttggaaagaccggcagaagtttatcttcacaatcttttacgacaacttctaagg
aggaaccttggtatccacgccttaaaaattgcccgcagttgttctgacctgcgccatttt
ccacacgttttggagctaatgcttcatgaaatccttgaagaagaggcaacagcatctgaa
ccattgccagatgcgatgctaccaagaattgttgcctttattcaagaatttccagaatat
ttacaaacagtcgtttattgcgcgcgtaagactgaagtagctttatggagttatcttttt
accgcggtaggaaatccacgagatttgtttcagaaatgtctggatggtggctatcttgaa
acagctgcttcttatttaatcattttacaaaatttggagaaaccggaagtcagtaagcag
ttggcgacaattttacttgaagctactttgttagatgacaagtacgagattgcaagagat
cttgtgcgttttcttggctccatcaaagttagtgatttcgacagcccaacacacagtcct
tgtgtgaaaaccccggtgatgccaaccgctcgtccttccctagtagacgatgatgaagat
gacctcacccctctcccccaaggaatacaacaatcacattctcagtcgacaagcaggata
agtgtgagacctccaatcaaacgaattagttcctcagacaggcttcaaacgcaaagatct
tatgataaatcttcaggatgtggacgaagcgaggaaaaaaactcaacttttgctaagaaa
tcagattcacaagagcagattgaaggtcccgaaggatcacaacatattgttttcagatat
tcaagcagcgaagctcccgaaggatttttcttagattcgattctcaaccgtcacgctcga
aaattgttatcaaacaacagacttaaagatcttggccgattttcagcttatcttgatttc
aacctacgggcatggctcaaaaaagaaagagatcgtgcagcaactgtgaacaattttgtg
gaagcatttctcagtatccatcggcagtttgaaagccctttcccttctaaagcgacagtg
aattcacttaacacggagacgtccaagccaacaattcgttcgaaatatcattctgcaacc
tcaagtataagttttggaaagcataaacgcattgatttagtcactgcggaagacgaaaca
gctcctgaagaggtggaattgcaatctcttcaagttgaacaatctgaaacgagctcattt
tctcttgatgacgatcctgatgaattagaggaaagtacatggagttacgacacaaatatt
aaagatttggatgattttattggacaagttccgtgttctcgtcagtcagataaagaaata
agatttttgttacaagcaatgtcggagtcctattgttttgattggtccttactgctgtca
ttggctttacgtgatggaccgttagttaaccaagtcgttcaagatattttgttgtctggc
attgatgaactagctctggaaaacttcattcgtcttagagatggcataaaaagcttagaa
aattgggcacagcgtgaatgtcaggaatacagtgtattttttggtctgtttaaaccacaa
tggagtgctctttccgatgccataactacagttgccactcgcttggcagaagctcggaaa
acaagtactagagtatctgagcaagtagatgttgacgatgaaaatggagcgacgtttact
gaaaaagtcaatagtgatatctccaacataggggaagcaaatgacccttatgaatgcatt
ctatcgtag
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