KEGG   Xenia sp. Carnegie-2017 (soft corals): 124440521
Entry
124440521         CDS       T08024                                 
Name
(RefSeq) collagen alpha-1(III) chain-like
  KO
K06237  collagen type IV alpha
Organism
xen  Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen04382  Cornified envelope formation
xen04512  ECM-receptor interaction
xen04518  Integrin signaling
xen04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:xen00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    124440521
   04518 Integrin signaling
    124440521
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    124440521
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    124440521
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xen04147]
    124440521
   00536 Glycosaminoglycan binding proteins [BR:xen00536]
    124440521
Exosome [BR:xen04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   124440521
Glycosaminoglycan binding proteins [BR:xen00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   124440521
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 124440521
NCBI-ProteinID: XP_046846870
LinkDB
Position
Unknown
AA seq 905 aa
MSLDFIGENGPDGEPGLDGRQGPKGPYGAYGESGSIGKKGAKGLPGYPGYIRSIILPGRS
DNKGPGPNDNRNRIDIMPPQPGPPGKPGKPGIRGTDGKYGPLGPEGIVGNKGSQGAPGKN
GLRGNDGLSGNPGDHGNPGRPGTVGMKGAIGKDGNPGIRGRKGHAGWKGDVGFVGERGAQ
GEKGTAGENGDKGEAGTEGRDGVSGSMGPRGQYGKAGKKGPVGKDGVIGPKGRMGHHASH
GRRGPMGSRGQPGGLGLRGDTGIPGEHGRRGDMGPNGLPGSAGHVGPIGNPGYKGSMGDP
GLFGGQGKLGPMGNMGSVGSEGSLGNRGDKGETGETGSRGERGDKGSTGDQGSLGVQGSN
GGEGTQGQYGEPGADGNDGLPGRKGDDGGNGIRGASGQKGYKGNDGSIGFSGSRGKRGKK
GRQGSPGKSGSVGKAGELGHNGNIGVHGRQGVPGLQGPPGILGVNGQAGKDGIQGKIGIS
GPAGPPGITGKDGDLGVIGPQGFMGPQGERGDRGSRGVPGVVGDDGDLGMPGKDGADGEV
GLAGDIGVSGPAGEKGEKGTEGGMGEDGEMGSPGFQGSAGGRGSVGEKGTSGPVGIIGIH
GSRGSKGMIGATGVLGQRGSKGAMGLPGKKGAPGVNGSPGMKGIDGPDGSDGDPGKRGGK
GPLGDTGKTGSSGQKGYQGARGDPGLQGSIGENGNPGIIGKRGLQGEIGQTGGKGETGDD
GLPGLAGLRGADGPPGNRGNAGQNGEDGFVGFAGPLGDKGEVGVPGKRGEQGSMGDLGIR
GTDGRKGFPGSQGYIGDRGSAGPMGERGSPGGHGEAGAQAGPGAPGVTGLPGLHGQPGTR
GNIGFRGQTGPVGPQGAMGEVGQTGKNGNDGKSGEQGSEGPKGIRGGQGRVENLENVDFL
VILET
NT seq 2718 nt   +upstreamnt  +downstreamnt
atgtcattagatttcattggggaaaatggtcctgatggtgaacctggtcttgatggtaga
caaggtccaaagggtccatatggagcatatggtgaatcgggaagtataggcaagaaaggt
gccaaaggtcttcctggttatcctggttacattcgatcaattattctccctggaaggtcc
gacaacaaaggacctggtcctaatgataacagaaacaggatagacataatgccacctcag
cctggaccacctggaaaacctggaaaacctggaattcggggtacagatggtaaatatgga
ccattaggacctgaaggcattgttggaaataagggaagtcaaggtgctcctggtaaaaat
ggtctacgtggaaacgatggtttgagcggaaatcctggcgaccacggcaatcctggacgt
cctggtacagttggtatgaagggagctattggaaaagatggaaatcctggaattcgtggc
agaaagggtcatgctggatggaaaggtgacgttggatttgttggtgagagaggagctcag
ggagagaaaggtacggctggtgaaaacggtgataagggcgaagctggtacagagggccgt
gacggcgtttccggtagcatgggaccacgtggtcagtatggaaaagcaggaaagaaagga
ccagtggggaaagatggagttatcggtcctaagggtcgtatgggacatcacgctagtcat
ggtagacggggtcctatgggttcacgaggacagccaggtggcttaggactacgtggagac
actggcatacccggtgaacatggaaggcgcggtgacatggggccaaatgggctaccgggc
tcagctgggcatgtgggaccaatcggaaacccgggttacaaaggttcaatgggtgaccca
ggcctgtttggtggtcaaggaaaacttggtcccatgggaaatatgggctcggttggttct
gaaggtagtctaggaaatagaggggataaaggtgaaacgggtgaaactggaagtcgaggg
gaaagaggtgataaaggttcaacaggagatcaaggatcattgggtgttcaaggaagcaat
ggtggagaagggactcagggtcaatatggagagcctggtgctgacggtaatgatggtctt
cctggtagaaagggtgatgatggtggtaatggtattcgtggagcttctggtcaaaagggc
tataagggcaatgatggatcgattggcttcagtggaagcagaggaaaaaggggaaagaaa
ggacgacagggctctcctggaaaatctggctcagttggaaaagctggagaacttggacat
aacggaaatatcggtgtacatggtcgacaaggtgttccgggactgcaaggccctccagga
atcttaggtgttaatgggcaagcgggaaaagatggtattcaagggaaaattgggatttca
gggcccgcaggtccaccgggtataactggtaaagatggggatcttggagtgatcggtcct
caagggtttatgggaccacaaggagagagaggtgatcggggtagtcgcggtgttccagga
gtagtgggagacgacggagacttgggaatgccaggaaaagacggtgcagacggggaagtg
ggacttgctggcgacataggcgttagtggtccagctggagaaaagggtgagaaaggtaca
gaagggggaatgggagaagatggagaaatgggttcacctggttttcaaggttcagcaggt
gggcgaggaagcgttggagaaaagggtacttctggtcccgttggtatcataggtattcat
ggatcacgtggaagcaagggaatgattggagctactggtgtacttggtcaacgtgggagt
aagggtgcaatgggtcttcctggtaaaaagggtgctcctggtgtaaatggtagtcctggg
atgaagggcattgatggtccagatggttctgatggagatcctgggaaacgtgggggtaaa
ggtccccttggagatactggaaaaactggatcttcagggcaaaaaggatatcagggtgct
cgtggtgatccaggtttacaaggatctattggagaaaatggcaatccgggtatcatagga
aaacgtggtcttcagggtgaaattgggcaaactggaggaaagggagagacaggagacgat
ggattgccaggtcttgctggactgaggggtgcggatggaccacctggcaaccgtggtaac
gccggtcaaaatggagaagatggctttgtgggctttgctggtcctctgggagataaaggt
gaagttggtgtacctggtaagcggggtgagcaagggtcgatgggagatcttgggattcgt
ggaactgatggtcgaaagggctttcctgggtcgcaaggatatattggcgatcgtggttct
gctggtcctatgggtgagcgtggttctcctgggggtcatggagaggctggtgctcaagct
ggacctggtgctcctggagttactggtcttcctggtcttcatggacaaccgggaacaagg
ggtaatattgggttcagaggacagacaggccctgttggacctcaaggtgctatgggagaa
gtcggtcagactggaaagaatggaaatgatggcaaatccggagaacagggttctgaaggc
ccaaaaggaatacgtggaggacaggggcgagtggaaaacctggaaaacgtggactttctg
gtaattctggaaacttag

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