Xenia sp. Carnegie-2017 (soft corals): 124441205
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Entry
124441205 CDS
T08024
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein 1 brain-like
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xen04040
]
124441205
Ion channels [BR:
xen04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
124441205
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
124441205
NCBI-ProteinID:
XP_046847588
LinkDB
All DBs
Position
Unknown
AA seq
1809 aa
AA seq
DB search
MPKFGGVAAQAAVRRGVQTDVKISSKTMQAAQVLKTHREAVESRREEDYREENEENLNNE
FDAEEDEVLIQVPKYLQGVPLVDAHSENSDETYIVIQKNLAGILQVNRFSSSKSCYLFGP
RNKLRKFTCYIITHQIFEFVILITILTNCIFLALNRPPKISEYVFAIIYTIEMLLKVVAK
GFVFQKYAYLRNSWNWLDFICVMIGYLTFIPSISNISVVRTFRALRALRTISAVKGLKAM
VNTLMKSIKMLSDVMILTGFFICVFALIGLQLFKGTLRNKCIKHGFTMENGDDWHLYVNN
SSNWLINNDFPFVCGNSSYAGHCPKNYTCIKDVGENPPKSLTPFISFDNFLWSLLTSLQL
VTLDSWEFVYNSVIGANGQMYVLYFLFVVLLGPFYLINLVLAVVSLSYEIESAALQDEEK
MKENYAALKRSASTYDFDCKEMPEPLYLDDIPQRPDAHVTHTTEHKLSRSPTPPTSHNAL
DLFEHQDQRISGCCSGFRAHINKIVESSLFEGFITTCILLNTLCMALEHHGMNETFAEVL
EICNLTFTIVFILEMILKLIALGIKKYVSIAWNLFDGVIVLMSIVDMSLEYSNASSGAGG
ALSVLRTFRLLRVLKLAKSWKTMGNLLATIGKSVRAVGNITVILLILMFIFAVVGMQVFS
SSYTTKKFEGRVPRWNFKDFPRSFMMVFRIICGKWIEPCWDVMHASHLVSFIYVILVFIL
GQWIVLNLFLALLLSSFGGDSLEEEKEKQTKQKKKKSLLEIFRRKKKRKITPNASNQDLD
KSDEDIKKAKETEAGLNLSNGGDTGNGNGLRKDENACSDTESLVNVTRIDGEMSQPSFPL
SVVVDEALARAKNVPYNPQNEPKEYLNVANRNGAHAVPNGNSHKESNLNLDLQMLGFNPT
LVNLNGDKRESMQSPMGIMRKGRTSSTRSGRRPTMIVIGEDGAPVAPNCYPTFCYDNGTC
FACCKCYRTSKTRKLWTTVRTKINFFVEHKYFESFILFLIVVSSLSLAFEDVHLKKRPTL
RKILHYSNYFFAVAFALEFLLKLIGYGVVGYFTSFWNLLDVSIVAISIATLFGNENLKAL
RSLRALRPLRAVSKFEGMKVVLNSLVLSLPAIGNVVLVCLVFWLIFSIMGVQFFGGKFYK
CVNEESGERYPPSVVPMKENCTGTNRRWINSKIHFDNALAGFLALFQVATLEGYMEVIFD
SVDATEKNHQPKTEAKYEMNFFYVVFITLGSFFILNLFIGVIIENFSKLKQQYEDNDAMG
IFLTPNQRIWVNTVSRTYMKKPRKQPKRPKAEWRGKVYDFVQSRSFEFVIMAIIILNILT
MMGEHHGQSEKFTEGLTYLNYIFTGLFVIEAILRVIALMSDYFRSGWNLFDFTIVMFSIT
EIVLESYKINMPFSPGLLRVVRVFRLARLLRFFESARGIRSLLFALLKSLPGLANIGCLL
FLFMFIYACIGMSLWGNVKQTGYLDDVVNFKTFFSSLLLLFRIATAAGWNTILEPMMIQP
PDCDDEFDGIPNGNCGDPLLAVVYFVSYILLIFLVTVNMYIAVILENFNEAQQQDEIGLC
EEDMDAFITIWEIYDPEATQFIHYRDLTHFLDALDPPLKIAKPNEQEAARLDIAIRQGNM
IHCLDLMLALVRKVIGNMEELTEDDKENMYENFEDRFQSSFPQRKTTTILCTINERYIRE
TAATITLQRAFRKWQCNNQTKWEKEKFHKHSMEEKIDKNYVWEEEQINDNCSMSCVTRAR
TASSPQKKAPLAVQETFDSPVPQSKKDKRNNNYTRETVCFNDPNATTDEQRYFNKDDNKH
KQQSSESVV
NT seq
5430 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagtttggaggcgtagctgcgcaagcagctgtaaggcgcggagtacaaactgac
gtaaaaatatcttcaaaaactatgcaagcggcacaagtcttgaaaactcatcgcgaagcc
gtcgagtctcgaagagaagaagattaccgcgaagagaacgaagaaaatcttaacaacgaa
ttcgatgctgaagaagatgaagtattaattcaagtaccaaaatacttacagggagttcca
ttagtggacgctcatagtgaaaattctgatgagacctatatagtcattcagaagaatctg
gcaggaattcttcaggtgaacagattttcttcctcgaaatcctgttatctctttggacca
cgaaataaacttagaaaattcacgtgttacatcattacacatcaaatattcgaatttgta
attttaataacgattttaaccaactgtatctttttggcgttaaatagaccacccaagatc
tcagagtacgtttttgcgatcatttacacgatagaaatgcttctaaaagtagtcgccaaa
ggttttgtgtttcagaaatacgcatacctaagaaattcgtggaattggctggattttatt
tgcgttatgataggctatctaacttttataccgtcaatctcaaacatttccgtagttcga
acatttcgagctttgagagctcttcgaacaatatcagcagtaaaaggtttaaaagcaatg
gtgaacactttaatgaaatccattaaaatgctttcggacgtgatgatccttacagggttt
ttcatctgcgtttttgctttgattggtcttcagctttttaaaggaacgctacgaaataaa
tgcataaagcatggattcaccatggagaatggagacgactggcatctgtatgttaataat
tcaagtaactggttaattaacaatgacttcccttttgtctgtggaaacagttcttatgcc
ggtcactgtccaaaaaattacacgtgtatcaaagatgttggtgaaaatcctccaaaatca
ctgactcctttcatctccttcgataatttcctctggtcgctgttgacttcactacagctt
gttacgcttgattcttgggagtttgtatataactcggttattggtgctaatggacagatg
tacgttctttactttctctttgttgttctcttgggtccattctatctcatcaacttagtt
ctcgctgtcgtttcattatcctacgagatcgagtcggcagctttacaagatgaagaaaaa
atgaaggaaaattatgcagcattaaagagaagcgcgtccacttatgactttgattgtaaa
gaaatgcccgaaccattatatttagacgatatacctcagcgtcctgacgctcacgtgact
cacacaacagaacacaagttgagtcgcagcccgacaccacctacgtcacacaacgcacta
gatttattcgagcatcaggatcaaagaatatcaggctgttgttctgggtttcgggctcac
atcaataagattgttgaaagctctttatttgaaggattcatcactacctgtattttatta
aatactttgtgtatggcactagaacatcatgggatgaacgaaacattcgccgaagttttg
gagatatgtaatctgacattcacgatagtcttcatcttggaaatgatcctgaaacttata
gcgcttggcatcaagaaatatgtttctattgcgtggaatttgttcgatggtgtgatcgta
ttaatgagtatagttgacatgtcattggaatattcaaatgcaagtagcggtgcaggtggt
gcattgagtgtactaagaacttttcgattgcttcgggtgttgaagttggcaaaatcctgg
aaaacaatgggtaatcttttggccacgattggtaaaagtgtgagggctgtaggcaacata
acagtaatactattgattctaatgttcatatttgctgtcgtcggtatgcaagtatttagt
tcttcatatacgactaaaaaattcgaaggtcgcgtaccacgatggaattttaaagatttt
cctcgatcattcatgatggtgttccgaataatctgtggtaaatggatcgaaccatgttgg
gatgtgatgcatgcatcgcatttagtgtcgtttatatatgttatccttgtatttatcctt
ggacaatggattgtgttgaatctgtttctggccttgcttcttagctcgttcgggggggat
tcgttggaggaggaaaaggaaaagcaaactaagcaaaaaaagaaaaagagtttactcgaa
atattcagacgtaagaaaaagcgtaagataacaccaaacgcatctaatcaagatcttgac
aaatcagatgaagatatcaaaaaagcaaaagaaactgaagcagggttaaatttgtccaat
ggaggtgacacaggaaatggaaatggactaagaaaagacgagaatgcgtgtagtgacacg
gaaagtcttgtcaacgtcacaagaattgatggtgaaatgtctcagccttcgtttcctctc
agtgttgttgtcgatgaagcactagcacgcgccaaaaacgtcccctataatccacagaat
gaacccaaagagtatcttaacgttgcaaacagaaacggagcacatgctgttccaaatgga
aattcccataaagagtcaaatttgaatcttgacctacaaatgttaggattcaatccaact
ttggtaaatctgaatggcgataaacgggaatccatgcagagtccaatgggtattatgaga
aaaggacgaaccagctcaacaagaagtggcagacgacccacaatgatagttattggcgaa
gacggcgcaccagtcgccccaaactgttatccaacattttgttacgataatggaacgtgt
ttcgcgtgttgcaaatgctacagaacttcaaagacacgaaaactatggacaaccgtacga
accaagattaatttcttcgtagagcacaaatactttgaatcgttcatcttgttcttgatt
gtcgtcagtagtttatcattggcattcgaagacgtccatcttaaaaaacgcccaacgcta
agaaagattctgcattattcaaactacttctttgccgttgccttcgctctcgaatttcta
cttaagctcattggctatggtgtagttggatattttacaagcttttggaatctgcttgac
gtctctattgtcgccatatcaattgcaacgttatttggtaatgagaacctaaaagcactt
cgttcattgagagccctcaggccacttcgcgctgtctcaaagtttgaaggcatgaaggtt
gtgctcaactcgcttgttctatcactaccagccataggaaatgttgttttagtctgtttg
gtgttctggttaatattttcgataatgggcgttcagttctttggcggaaagttctacaaa
tgcgtaaacgaggaaagcggagaaaggtatccgcctagtgtggttccaatgaaagaaaat
tgcacaggcactaacagacgatggatcaattccaaaattcatttcgataacgctcttgct
ggttttcttgctttgtttcaagtggccaccttagaaggttacatggaagtgatttttgac
tctgtggatgcaacagagaaaaatcatcagccaaagacagaagcaaaatatgaaatgaat
ttcttctatgttgtgttcatcacattgggttctttcttcattttgaatctatttatcggt
gttattatcgaaaactttagtaaactcaagcaacagtacgaagacaatgatgcaatgggg
atatttttgacaccaaaccaaagaatttgggtgaacacagttagtagaacatacatgaaa
aaaccaagaaaacagcctaagagaccaaaggctgaatggaggggaaaagtatatgatttc
gttcaaagtcggtcgttcgagttcgttataatggcaataataatactcaatattctcaca
atgatgggcgagcaccatgggcagtcggagaaatttactgagggattgacatatctcaac
tatatattcacaggactatttgtcattgaagccatactgcgcgtgattgctctaatgtct
gactacttcaggtcaggatggaaccttttcgatttcaccattgtcatgttttcaataaca
gaaattgtactggaatcatacaagattaatatgcctttttcaccgggattactacgagta
gtgagagtatttcggttggcaagattgctgcgcttcttcgagagtgcaagaggaattcgt
agcctactattcgctcttttgaaatcactcccaggtctcgcaaatattgggtgtcttctt
tttctgttcatgttcatctacgcttgtattggtatgtcgttatggggaaatgtcaaacag
acgggataccttgatgacgtcgtcaacttcaaaacgttcttttccagtcttttgctgttg
tttcgcattgcgactgcagctggttggaacacaatactcgagccaatgatgattcaacca
ccagattgtgacgacgaatttgatggcattccaaatggtaactgtggtgatcctttgcta
gcggtagtatactttgttagctacattcttttgatctttcttgtgactgtgaacatgtac
atagcggtcatattggagaactttaacgaagctcaacaacaagatgaaatagggttatgt
gaggaagacatggacgcctttataactatttgggaaatatacgatcccgaggcaacccaa
tttatccactaccgagacctaactcattttctagatgctttggatccaccattaaagatt
gcaaagccaaacgaacaagaagcagctcggcttgatattgcaatacgacagggcaacatg
atacattgtcttgatttaatgctagcattggtgagaaaagttatcggtaatatggaggaa
ctcacggaggatgataaagagaacatgtatgaaaacttcgaagatcgttttcagtcatca
tttccacaacgtaaaacaacaacgatattgtgcacgatcaatgaacggtacatacgtgag
accgcggctactattacattgcaacgtgcctttcgcaaatggcagtgcaataaccagaca
aaatgggaaaaagagaaatttcacaaacactcgatggaagaaaagatcgataaaaattat
gtatgggaggaagaacaaatcaatgataactgttcgatgtcatgtgttactcgagctcgt
acagcatcgagtcctcagaaaaaggctccgctagcggtacaggagacctttgatagtcct
gtaccacaatccaagaaagataaaaggaacaataactacacaagggaaacagtatgcttt
aacgatcctaatgcaacaaccgacgagcagaggtatttcaataaagatgataacaaacac
aagcaacaatcatcagaatcagtagtctag
DBGET
integrated database retrieval system
