KEGG   Xenia sp. Carnegie-2017 (soft corals): 124441305
Entry
124441305         CDS       T08024                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9-like
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
xen  Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03020  RNA polymerase
xen03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:xen00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    124441305
  09124 Replication and repair
   03420 Nucleotide excision repair
    124441305
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xen03021]
    124441305
   03400 DNA repair and recombination proteins [BR:xen03400]
    124441305
Transcription machinery [BR:xen03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     124441305
DNA repair and recombination proteins [BR:xen03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      124441305
SSDB
Motif
Pfam: Zn_ribbon_RPB9 Zn_ribbon_TFIIS Ogr_Delta DZR HVO_2753_ZBP Zn_ribbon_recom SR1P
Other DBs
NCBI-GeneID: 124441305
NCBI-ProteinID: XP_046847711
LinkDB
Position
Unknown
AA seq 129 aa
MMFRRQDREVESGPGFVGIKFCQECNNMLYPKEDKEMKILLYACRNCDYQERADNSCIYV
NKIMHEVNELTQIVADVIADPTLPRTHEHQCPRCGYGEAVFFQSQSSKADQMKLYYVCTQ
VDCGYRWTE
NT seq 390 nt   +upstreamnt  +downstreamnt
atgatgtttagaagacaagatagagaagtggagagtggtcctggatttgtgggaataaaa
ttttgtcaagaatgcaacaacatgctttatccaaaagaagacaaagaaatgaaaatatta
ctttatgcatgtcggaattgtgattaccaagagagagctgataatagttgtatttatgtg
aataaaattatgcatgaagtgaatgaactgacgcagattgttgcagatgttattgctgat
ccaactttacctagaacacatgaacatcaatgtccaagatgtggctatggtgaagcagtc
ttctttcaatcacaatcaagcaaagctgatcaaatgaagctgtattatgtttgtactcaa
gtggactgtggctatcgttggacagaatag

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