Xenia sp. Carnegie-2017 (soft corals): 124441384
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Entry
124441384 CDS
T08024
Name
(RefSeq) DNA mismatch repair protein Msh2-like isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
124441384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xen03400
]
124441384
DNA repair and recombination proteins [BR:
xen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
124441384
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
Rad17
Motif
Other DBs
NCBI-GeneID:
124441384
NCBI-ProteinID:
XP_046847801
LinkDB
All DBs
Position
Unknown
AA seq
941 aa
AA seq
DB search
MKRLKNFLVSFSNQNIFLEKEYIVSFLSYLINLSLFLWNCPQKSETTIRVFDRNEYYTVH
GNDATFIAKEIIKSLNIVKHIGAGETKMPSIALSKPKFESTIRELLLVRQYRVEMYQNKG
GKGAKQNWFLAGKASPGNLQQFEDILFGNNEMSSSVAVMAFKLIGNSNQKVLGAACIDVS
ERSISVCEIADDDQFSNVEALLVQMGPKECIIQANDKSADAVKLEEVIKRSGILITKRKK
GDFSSIDIVQDLNRLLKNNPGDSSALPEVDLKQAMECVAVIIKYLEVLSDESNFGRFRLS
TIDLSQHMKLDAAAVHALNILPSSTDGSKSMCLMNLLNKCRSPQGKRLLGQWIKQPLLDE
QRIGERLNITEAFVNNVLLRQTVQEELRRFLDFSRMAKKFQKSRATLKDCVRVYQAVARI
QELVTGLEECNDEHQPLITEVFIIPLQELMQDFTKYNELIETTIDFDQIENQEFLIKPSF
DEALQECRESMDQLQQKIPRELNKAASELGLEAGKTIKLETSNQLGYFLRITRKEEKKLR
GKKPYITLETKKDGVRFTTSVLRRINEEFRVLKNTYDDVQSKLADEVLKVAGGYGEPMQI
LSDVLAKLDVLVSFAHVAACAPIPYCRPKILPKEQGLIELKACRHPCLEVQDDVSFIPND
VILKRDEQYFLIITGPNMGGKSTYIRSVSVAVLMAQIGCFVPCEEASISIRDATLARVGS
SDNQVKGVSTFMSEMLETSSILRIATENSLIIIDELGRGTSTYDGFGLAWAISEYISTRI
KAPCLFATHFHELTALADVVPTVRNYHVTAMATDNCLTLLYRIKPGVCDQSFGIHVAELT
NFPLKVIEFAKRKAIELEDFQDQTGNFTCDVDEEKSLAKKRRSDKKEGDKMIYKYLQSVA
ALPIDDLTDLQVSEQFASFKQDLLEKNNSYVTAMLSRNIEL
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcttgaagaactttttagttagcttttcaaaccagaatatttttctcgagaaa
gaatatattgtcagttttctttcctatctgattaatttgtctttgtttttatggaactgt
cctcagaagtctgaaacgacaattcgtgtgtttgatagaaatgagtactataccgtccat
gggaatgatgcaactttcattgccaaagaaataatcaagtctttgaatattgttaagcac
ataggggctggagaaacgaagatgccttccattgcattaagcaagcctaagtttgaatca
acaatccgcgagctcttattagttcgacagtatcgagttgaaatgtatcaaaacaaaggt
ggcaaaggagctaaacaaaactggtttcttgctggaaaggcttctccaggaaacttacag
cagtttgaagatattttgtttggcaacaatgaaatgtccagttctgttgcggtgatggct
tttaaactcattgggaactctaatcaaaaggttttaggtgcagcatgtattgatgtttca
gaaaggagtatttccgtctgtgaaattgctgatgatgatcaattttctaatgttgaggca
ttgttagttcagatgggtccaaaagaatgtattattcaagctaatgataaatcagctgat
gctgtcaaattagaagaagttattaaacgatctggaattcttattaccaaaaggaaaaaa
ggtgatttctcgtccatcgacattgtgcaggatctcaacagacttttaaagaataatcct
ggagatagttcggctttgcctgaggttgatttgaaacaagcgatggaatgcgttgctgtg
attataaagtatcttgaggtactgtctgatgagtcaaactttggtcgttttcgtttgtcc
accattgacttgagtcaacacatgaaacttgatgcggcagctgttcatgctttgaatatt
ttaccttcttccacagatggctccaagtccatgtgtttgatgaatttgctaaataaatgc
agatctcctcaaggcaagagacttttgggacaatggattaaacagcctttactggatgaa
caacgcataggcgaaagactgaatatcacggaggcttttgtcaacaacgtacttttgcgt
caaacagttcaggaggaactgaggcggtttcttgacttctcaagaatggcgaagaagttt
cagaaaagtcgagcgacactaaaggactgtgtgcgtgtgtatcaggcggtggccaggatt
caggaacttgtgacgggtttagaagaatgcaatgatgaacatcaaccactgattactgaa
gtgtttatcataccactgcaggaactaatgcaagacttcacaaaatataatgaactgata
gaaacaaccattgattttgatcaaatagaaaatcaggaatttcttatcaaaccttcattt
gacgaggcccttcaagaatgcagagaaagcatggatcaattgcagcagaaaattcctcga
gaattaaataaggctgcgagtgagttgggtctagaagctggaaaaacaatcaaactggaa
acgagtaaccagttaggatattttctacgcatcacaagaaaggaagagaaaaagttacgt
ggtaaaaagccttacattacgctggaaacgaagaaagatggcgtacgttttacgacttcc
gttttaagacgaataaacgaagagtttcgcgttttgaagaacacgtacgatgatgttcaa
agtaaacttgcagatgaagtgttaaaagttgcaggtggttacggtgaaccgatgcaaatt
ttgagtgatgtcctggcaaaacttgacgtcttagttagttttgctcacgtagctgcttgc
gctcctataccttactgtcgtccgaagatattaccaaaagagcaagggctgatagagttg
aaagcttgtaggcatccatgtttagaagttcaggacgatgtttcttttatcccaaacgac
gttatattgaaaagagatgaacaatatttcctgattattactggccctaacatgggtggc
aagtcaacatatatacgatcggtgagtgttgctgtactcatggctcaaattggatgcttt
gttccatgtgaggaggccagtatttctatccgagacgcaacattagcaagagtcggatct
tctgacaatcaagtaaaaggtgtttccacttttatgtcagaaatgctcgaaacttcctcg
atactaaggattgcgactgaaaactctcttatcattatcgatgagcttggacggggaaca
tcaacttacgatggctttggtttagcttgggctatttcagaatacatatcgacgcgtata
aaggccccatgcctctttgcaactcattttcatgaattgacggcgttggccgatgttgtt
cctactgttagaaactatcacgtgactgccatggctacagataattgtcttactttgttg
tacagaataaaaccaggtgtctgcgatcagagttttggaatacatgtcgccgagttaaca
aattttcctcttaaagtgatcgagtttgcaaaaagaaaagctattgaattggaagatttt
caagaccagactggaaactttacctgtgacgtggatgaggagaagtctctagcaaaaaag
cgtcgttcggataaaaaggaaggagacaaaatgatttacaaatatctccaaagtgtagct
gctttgccgattgacgatctgaccgatttacaagtttcagagcaatttgcttcatttaaa
caagatcttctcgagaagaataatagttacgtgaccgctatgttgtccaggaacatagaa
ttatga
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